RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 DCAF11Q8TEB1 546 aa22.21■■□□□ 1.15
COL11A1-204ENST00000427239 EID1Q9Y6B2 187 aa22.21■■□□□ 1.15
COL11A1-204ENST00000427239 LMTK3Q96Q04 1460 aa22.2■■□□□ 1.14
COL11A1-204ENST00000427239 ANKLE2Q86XL3 938 aa22.18■■□□□ 1.14
COL11A1-204ENST00000427239 SLIT1O75093 1534 aa22.18■■□□□ 1.14
COL11A1-204ENST00000427239 RIMS2Q9UQ26 1411 aa22.17■■□□□ 1.14
COL11A1-204ENST00000427239 TXNDC2Q86VQ3 553 aa22.17■■□□□ 1.14
COL11A1-204ENST00000427239 ARHGAP23Q9P227 1491 aa22.17■■□□□ 1.14
COL11A1-204ENST00000427239 ZFYVE9O95405 1425 aa22.16■■□□□ 1.14
COL11A1-204ENST00000427239 MYO5BQ9ULV0 1848 aa22.15■■□□□ 1.14
COL11A1-204ENST00000427239 KDM2AQ9Y2K7 1162 aa22.15■■□□□ 1.14
COL11A1-204ENST00000427239 PPP1R15AO75807 674 aaPredicted RBP22.14■■□□□ 1.14
COL11A1-204ENST00000427239 LTKP29376 864 aa22.14■■□□□ 1.14
COL11A1-204ENST00000427239 HSPA2P54652 639 aa22.14■■□□□ 1.14
COL11A1-204ENST00000427239 NEXMIFQ5QGS0 1516 aa22.14■■□□□ 1.13
COL11A1-204ENST00000427239 NUTM2DQ5VT03 806 aaPredicted RBP22.12■■□□□ 1.13
COL11A1-204ENST00000427239 ZEB1P37275 1124 aaPredicted RBP22.11■■□□□ 1.13
COL11A1-204ENST00000427239 MYOM2P54296 1465 aa22.1■■□□□ 1.13
COL11A1-204ENST00000427239 SCAF11Q99590 1463 aaKnown RBP22.1■■□□□ 1.13
COL11A1-204ENST00000427239 ADGRF5Q8IZF2 1346 aa22.1■■□□□ 1.13
COL11A1-204ENST00000427239 PPLO60437 1756 aa22.09■■□□□ 1.13
COL11A1-204ENST00000427239 PLEKHG1Q9ULL1 1385 aa22.07■■□□□ 1.12
COL11A1-204ENST00000427239 IFT172Q9UG01 1749 aa22.07■■□□□ 1.12
COL11A1-204ENST00000427239 NCKAP5LQ9HCH0 1330 aa22.06■■□□□ 1.12
COL11A1-204ENST00000427239 NRXN1Q9ULB1 1477 aa22.06■■□□□ 1.12
COL11A1-204ENST00000427239 BCANQ96GW7 911 aa22.05■■□□□ 1.12
COL11A1-204ENST00000427239 MED14O60244 1454 aa22.04■■□□□ 1.12
COL11A1-204ENST00000427239 PIK3C2GO75747 1445 aa22.03■■□□□ 1.12
COL11A1-204ENST00000427239 PRAG1Q86YV5 1406 aa22.03■■□□□ 1.12
COL11A1-204ENST00000427239 C14orf93Q9H972 538 aaKnown RBP22.02■■□□□ 1.12
COL11A1-204ENST00000427239 DMRT2Q9Y5R5 561 aa22.01■■□□□ 1.11
COL11A1-204ENST00000427239 NBPF8Q3BBV2 869 aa22■■□□□ 1.11
COL11A1-204ENST00000427239 NPHP4O75161 1426 aaPredicted RBP22■■□□□ 1.11
COL11A1-204ENST00000427239 TBX22Q9Y458 520 aa22■■□□□ 1.11
COL11A1-204ENST00000427239 SETBP1Q9Y6X0 1596 aa21.98■■□□□ 1.11
COL11A1-204ENST00000427239 CFAP70Q5T0N1 1121 aa21.97■■□□□ 1.11
COL11A1-204ENST00000427239 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
COL11A1-204ENST00000427239 POLR1AO95602 1720 aaPredicted RBP21.97■■□□□ 1.11
COL11A1-204ENST00000427239 SLC26A8Q96RN1 970 aa21.97■■□□□ 1.11
COL11A1-204ENST00000427239 ADAMTS13Q76LX8 1427 aa21.95■■□□□ 1.1
COL11A1-204ENST00000427239 STRCQ7RTU9 1775 aa21.94■■□□□ 1.1
COL11A1-204ENST00000427239 ALKQ9UM73 1620 aa21.93■■□□□ 1.1
COL11A1-204ENST00000427239 IQGAP1P46940 1657 aa21.92■■□□□ 1.1
COL11A1-204ENST00000427239 DIP2AQ14689 1571 aa21.91■■□□□ 1.1
COL11A1-204ENST00000427239 NRXN3Q9Y4C0 1643 aa21.91■■□□□ 1.1
COL11A1-204ENST00000427239 NBPF1Q3BBV0 1214 aa21.91■■□□□ 1.1
COL11A1-204ENST00000427239 LAMC1P11047 1609 aa21.9■■□□□ 1.1
COL11A1-204ENST00000427239 KIAA1210Q9ULL0 1709 aa21.9■■□□□ 1.1
COL11A1-204ENST00000427239 ROCK2O75116 1388 aaKnown RBP21.9■■□□□ 1.1
COL11A1-204ENST00000427239 PIK3R4Q99570 1358 aa21.9■■□□□ 1.1
COL11A1-204ENST00000427239 TMEM132EQ6IEE7 984 aa21.89■■□□□ 1.09
COL11A1-204ENST00000427239 METP08581 1390 aa21.88■■□□□ 1.09
COL11A1-204ENST00000427239 RALGAPBQ86X10 1494 aa21.88■■□□□ 1.09
COL11A1-204ENST00000427239 GPRASP1Q5JY77 1395 aa21.87■■□□□ 1.09
COL11A1-204ENST00000427239 TRPM1Q7Z4N2 1603 aa21.87■■□□□ 1.09
COL11A1-204ENST00000427239 CARD11Q9BXL7 1154 aa21.86■■□□□ 1.09
COL11A1-204ENST00000427239 ADGRB1O14514 1584 aa21.84■■□□□ 1.09
COL11A1-204ENST00000427239 KCNA6P17658 529 aa21.83■■□□□ 1.09
COL11A1-204ENST00000427239 AMOTL2Q9Y2J4 779 aa21.83■■□□□ 1.09
COL11A1-204ENST00000427239 SETD1AO15047 1707 aaKnown RBP21.83■■□□□ 1.08
COL11A1-204ENST00000427239 YTHDC2Q9H6S0 1430 aaKnown RBP21.82■■□□□ 1.08
COL11A1-204ENST00000427239 LRPPRCP42704 1394 aaKnown RBP21.82■■□□□ 1.08
COL11A1-204ENST00000427239 ABCC11Q96J66 1382 aa21.82■■□□□ 1.08
COL11A1-204ENST00000427239 STK26Q9P289 416 aa21.81■■□□□ 1.08
COL11A1-204ENST00000427239 SIRT1Q96EB6 747 aa21.8■■□□□ 1.08
COL11A1-204ENST00000427239 TRAK1Q9UPV9 953 aa21.79■■□□□ 1.08
COL11A1-204ENST00000427239 ASXL1Q8IXJ9 1541 aa21.79■■□□□ 1.08
COL11A1-204ENST00000427239 PTPRUQ92729 1446 aa21.78■■□□□ 1.08
COL11A1-204ENST00000427239 TECPR2O15040 1411 aa21.76■■□□□ 1.07
COL11A1-204ENST00000427239 CHD2O14647 1828 aaKnown RBP21.75■■□□□ 1.07
COL11A1-204ENST00000427239 EIF3AQ14152 1382 aaKnown RBP21.75■■□□□ 1.07
COL11A1-204ENST00000427239 EIF4G2P78344 907 aaKnown RBP eCLIP21.75■■□□□ 1.07
COL11A1-204ENST00000427239 ZNF335Q9H4Z2 1342 aaPredicted RBP21.74■■□□□ 1.07
COL11A1-204ENST00000427239 FAM135BQ49AJ0 1406 aa21.72■■□□□ 1.07
COL11A1-204ENST00000427239 POGKQ9P215 609 aa21.72■■□□□ 1.07
COL11A1-204ENST00000427239 DLC1Q96QB1 1528 aa21.72■■□□□ 1.07
COL11A1-204ENST00000427239 USP47Q96K76 1375 aa21.72■■□□□ 1.07
COL11A1-204ENST00000427239 PTCH1Q13635 1447 aa21.72■■□□□ 1.07
COL11A1-204ENST00000427239 PRAM1Q96QH2 718 aa21.71■■□□□ 1.07
COL11A1-204ENST00000427239 NWD1Q149M9 1564 aa21.71■■□□□ 1.07
COL11A1-204ENST00000427239 ROBO2Q9HCK4 1378 aa21.71■■□□□ 1.07
COL11A1-204ENST00000427239 PROSER2Q86WR7 435 aaPredicted RBP21.7■■□□□ 1.06
COL11A1-204ENST00000427239 XRN1Q8IZH2 1706 aaKnown RBP21.7■■□□□ 1.06
COL11A1-204ENST00000427239 NKTRP30414 1462 aaKnown RBP21.7■■□□□ 1.06
COL11A1-204ENST00000427239 SLC24A1O60721 1099 aa21.69■■□□□ 1.06
COL11A1-204ENST00000427239 WAPLQ7Z5K2 1190 aa21.69■■□□□ 1.06
COL11A1-204ENST00000427239 CENPJQ9HC77 1338 aaPredicted RBP21.69■■□□□ 1.06
COL11A1-204ENST00000427239 ST20-MTHFSA0A0A6YYL1 179 aa21.69■■□□□ 1.06
COL11A1-204ENST00000427239 CPS1P31327 1500 aa21.68■■□□□ 1.06
COL11A1-204ENST00000427239 KNDC1Q76NI1 1749 aa21.68■■□□□ 1.06
COL11A1-204ENST00000427239 HSPA5P11021 654 aaKnown RBP21.66■■□□□ 1.06
COL11A1-204ENST00000427239 NCOA3Q9Y6Q9 1424 aa21.65■■□□□ 1.06
COL11A1-204ENST00000427239 SAFB2Q14151 953 aaKnown RBP eCLIP21.63■■□□□ 1.05
COL11A1-204ENST00000427239 PLEKHH1Q9ULM0 1364 aa21.63■■□□□ 1.05
COL11A1-204ENST00000427239 ARHGEF28Q8N1W1 1705 aaKnown RBP21.63■■□□□ 1.05
COL11A1-204ENST00000427239 STRCP1A6NGW2 1772 aa21.62■■□□□ 1.05
COL11A1-204ENST00000427239 TMEM94Q12767 1356 aa21.62■■□□□ 1.05
COL11A1-204ENST00000427239 SBNO2Q9Y2G9 1366 aa21.62■■□□□ 1.05
COL11A1-204ENST00000427239 TESK2Q96S53 571 aa21.6■■□□□ 1.05
COL11A1-204ENST00000427239 LRRC7Q96NW7 1537 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms