RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 NOS1P29475 1434 aa22.85■■□□□ 1.25
PDAP1-202ENST00000426447 FGD6Q6ZV73 1430 aa22.84■■□□□ 1.25
PDAP1-202ENST00000426447 NKTRP30414 1462 aaKnown RBP22.84■■□□□ 1.25
PDAP1-202ENST00000426447 C14orf37Q86TY3 774 aa22.83■■□□□ 1.25
PDAP1-202ENST00000426447 JCADQ9P266 1359 aa22.83■■□□□ 1.25
PDAP1-202ENST00000426447 ADGRB3O60242 1522 aa22.82■■□□□ 1.24
PDAP1-202ENST00000426447 CHGAP10645 457 aaKnown RBP22.8■■□□□ 1.24
PDAP1-202ENST00000426447 FAM50AQ14320 339 aaKnown RBP22.79■■□□□ 1.24
PDAP1-202ENST00000426447 MEX3CQ5U5Q3 659 aaKnown RBP22.79■■□□□ 1.24
PDAP1-202ENST00000426447 PLEKHG1Q9ULL1 1385 aa22.78■■□□□ 1.24
PDAP1-202ENST00000426447 NWD1Q149M9 1564 aa22.77■■□□□ 1.24
PDAP1-202ENST00000426447 TBX22Q9Y458 520 aa22.77■■□□□ 1.24
PDAP1-202ENST00000426447 RIMS2Q9UQ26 1411 aa22.76■■□□□ 1.23
PDAP1-202ENST00000426447 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.76■■□□□ 1.23
PDAP1-202ENST00000426447 PHLPP1O60346 1717 aa22.76■■□□□ 1.23
PDAP1-202ENST00000426447 RPRD2Q5VT52 1461 aaKnown RBP22.73■■□□□ 1.23
PDAP1-202ENST00000426447 ATF3P18847 181 aa22.73■■□□□ 1.23
PDAP1-202ENST00000426447 NUTM2DQ5VT03 806 aaPredicted RBP22.73■■□□□ 1.23
PDAP1-202ENST00000426447 ZNF772Q68DY9 489 aaPredicted RBP22.73■■□□□ 1.23
PDAP1-202ENST00000426447 SPATA31A6Q5VVP1 1343 aa22.73■■□□□ 1.23
PDAP1-202ENST00000426447 ZFYVE9O95405 1425 aa22.73■■□□□ 1.23
PDAP1-202ENST00000426447 ANKRD50Q9ULJ7 1429 aa22.73■■□□□ 1.23
PDAP1-202ENST00000426447 CADPS2Q86UW7 1296 aa22.72■■□□□ 1.23
PDAP1-202ENST00000426447 C19orf44Q9H6X5 657 aa22.71■■□□□ 1.23
PDAP1-202ENST00000426447 NCOA3Q9Y6Q9 1424 aa22.71■■□□□ 1.23
PDAP1-202ENST00000426447 ADGRL2O95490 1459 aa22.69■■□□□ 1.22
PDAP1-202ENST00000426447 TRIM52Q96A61 297 aa22.69■■□□□ 1.22
PDAP1-202ENST00000426447 CHD2O14647 1828 aaKnown RBP22.67■■□□□ 1.22
PDAP1-202ENST00000426447 SETD1AO15047 1707 aaKnown RBP22.65■■□□□ 1.22
PDAP1-202ENST00000426447 UPF1Q92900 1129 aaKnown RBP eCLIP22.65■■□□□ 1.221e-10■■■■□ 20.8
PDAP1-202ENST00000426447 NUTM2BA6NNL0 878 aaPredicted RBP22.64■■□□□ 1.21
PDAP1-202ENST00000426447 NUTM2EB1AL46 878 aaPredicted RBP22.64■■□□□ 1.21
PDAP1-202ENST00000426447 NUTM2AQ8IVF1 878 aaPredicted RBP22.64■■□□□ 1.21
PDAP1-202ENST00000426447 AMOTL2Q9Y2J4 779 aa22.64■■□□□ 1.21
PDAP1-202ENST00000426447 TMEM131LA2VDJ0 1609 aa22.64■■□□□ 1.21
PDAP1-202ENST00000426447 COL16A1Q07092 1604 aaPredicted RBP22.64■■□□□ 1.21
PDAP1-202ENST00000426447 GCC2Q8IWJ2 1684 aa22.63■■□□□ 1.21
PDAP1-202ENST00000426447 RXRBP28702 533 aa22.63■■□□□ 1.21
PDAP1-202ENST00000426447 LRP6O75581 1613 aa22.63■■□□□ 1.21
PDAP1-202ENST00000426447 PIK3R4Q99570 1358 aa22.62■■□□□ 1.21
PDAP1-202ENST00000426447 ADAMTS13Q76LX8 1427 aa22.61■■□□□ 1.21
PDAP1-202ENST00000426447 MYO5BQ9ULV0 1848 aa22.61■■□□□ 1.21
PDAP1-202ENST00000426447 BRINP3Q76B58 766 aa22.6■■□□□ 1.21
PDAP1-202ENST00000426447 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.57■■□□□ 1.2
PDAP1-202ENST00000426447 AHDC1Q5TGY3 1603 aaPredicted RBP22.56■■□□□ 1.2
PDAP1-202ENST00000426447 DIP2AQ14689 1571 aa22.55■■□□□ 1.2
PDAP1-202ENST00000426447 TRPM2O94759 1503 aa22.53■■□□□ 1.2
PDAP1-202ENST00000426447 AFF2P51816 1311 aa22.53■■□□□ 1.2
PDAP1-202ENST00000426447 NUP155O75694 1391 aa22.52■■□□□ 1.2
PDAP1-202ENST00000426447 PTPRUQ92729 1446 aa22.52■■□□□ 1.2
PDAP1-202ENST00000426447 ZNF326Q5BKZ1 582 aaKnown RBP22.52■■□□□ 1.2
PDAP1-202ENST00000426447 LRRC59Q96AG4 307 aaKnown RBP22.52■■□□□ 1.2
PDAP1-202ENST00000426447 SHPRHQ149N8 1683 aa22.51■■□□□ 1.19
PDAP1-202ENST00000426447 UNC13BO14795 1591 aa22.5■■□□□ 1.19
PDAP1-202ENST00000426447 E9PCH4 1651 aa22.49■■□□□ 1.19
PDAP1-202ENST00000426447 ITGAEP38570 1179 aa22.49■■□□□ 1.19
PDAP1-202ENST00000426447 C8orf37Q96NL8 207 aa22.48■■□□□ 1.19
PDAP1-202ENST00000426447 DCCP43146 1447 aa22.48■■□□□ 1.19
PDAP1-202ENST00000426447 QTRT2Q9H974 415 aaKnown RBP22.47■■□□□ 1.19
PDAP1-202ENST00000426447 ROCK1Q13464 1354 aa22.47■■□□□ 1.19
PDAP1-202ENST00000426447 SETD5Q9C0A6 1442 aa22.46■■□□□ 1.19
PDAP1-202ENST00000426447 CDK12Q9NYV4 1490 aaPredicted RBP22.45■■□□□ 1.18
PDAP1-202ENST00000426447 ASXL1Q8IXJ9 1541 aa22.45■■□□□ 1.18
PDAP1-202ENST00000426447 DDX17Q92841 729 aaKnown RBP22.44■■□□□ 1.18
PDAP1-202ENST00000426447 MST1RQ04912 1400 aa22.43■■□□□ 1.18
PDAP1-202ENST00000426447 RBM6P78332 1123 aaKnown RBP22.43■■□□□ 1.18
PDAP1-202ENST00000426447 IQGAP3Q86VI3 1631 aa22.42■■□□□ 1.18
PDAP1-202ENST00000426447 NGLY1Q96IV0 654 aa22.42■■□□□ 1.18
PDAP1-202ENST00000426447 METP08581 1390 aa22.41■■□□□ 1.18
PDAP1-202ENST00000426447 ADAMTS2O95450 1211 aa22.4■■□□□ 1.18
PDAP1-202ENST00000426447 PNPLA6Q8IY17 1366 aa22.38■■□□□ 1.17
PDAP1-202ENST00000426447 SETBP1Q9Y6X0 1596 aa22.37■■□□□ 1.17
PDAP1-202ENST00000426447 XRN1Q8IZH2 1706 aaKnown RBP22.35■■□□□ 1.17
PDAP1-202ENST00000426447 ADGRL3Q9HAR2 1447 aa22.35■■□□□ 1.17
PDAP1-202ENST00000426447 RGS12O14924 1447 aa22.34■■□□□ 1.17
PDAP1-202ENST00000426447 NRXN3Q9Y4C0 1643 aa22.34■■□□□ 1.17
PDAP1-202ENST00000426447 NHSL1Q5SYE7 1610 aa22.33■■□□□ 1.17
PDAP1-202ENST00000426447 USP21Q9UK80 565 aa22.32■■□□□ 1.16
PDAP1-202ENST00000426447 ORAI2Q96SN7 254 aa22.3■■□□□ 1.16
PDAP1-202ENST00000426447 C1orf167Q5SNV9 1468 aa22.29■■□□□ 1.16
PDAP1-202ENST00000426447 PPARGC1BQ86YN6 1023 aaKnown RBP22.29■■□□□ 1.16
PDAP1-202ENST00000426447 VGFO15240 615 aaPredicted RBP22.28■■□□□ 1.16
PDAP1-202ENST00000426447 TRPC5Q9UL62 973 aaPredicted RBP22.28■■□□□ 1.16
PDAP1-202ENST00000426447 ATAD2Q6PL18 1390 aa22.27■■□□□ 1.16
PDAP1-202ENST00000426447 FOXD1Q16676 465 aa22.27■■□□□ 1.16
PDAP1-202ENST00000426447 SPHKAPQ2M3C7 1700 aa22.27■■□□□ 1.16
PDAP1-202ENST00000426447 SOS2Q07890 1332 aaPredicted RBP22.26■■□□□ 1.15
PDAP1-202ENST00000426447 NEXMIFQ5QGS0 1516 aa22.23■■□□□ 1.15
PDAP1-202ENST00000426447 FNBP4Q8N3X1 1017 aaPredicted RBP22.23■■□□□ 1.15
PDAP1-202ENST00000426447 NALCNQ8IZF0 1738 aa22.23■■□□□ 1.15
PDAP1-202ENST00000426447 ROBO2Q9HCK4 1378 aa22.22■■□□□ 1.15
PDAP1-202ENST00000426447 ZRANB1Q9UGI0 708 aa22.21■■□□□ 1.15
PDAP1-202ENST00000426447 ESCO1Q5FWF5 840 aa22.2■■□□□ 1.14
PDAP1-202ENST00000426447 PTCH1Q13635 1447 aa22.2■■□□□ 1.14
PDAP1-202ENST00000426447 CLTCL1P53675 1640 aa22.2■■□□□ 1.14
PDAP1-202ENST00000426447 RPGRIP1LQ68CZ1 1315 aa22.18■■□□□ 1.14
PDAP1-202ENST00000426447 NPHP3Q7Z494 1330 aa22.16■■□□□ 1.14
PDAP1-202ENST00000426447 CCDC125Q86Z20 511 aa22.15■■□□□ 1.14
PDAP1-202ENST00000426447 HFM1A2PYH4 1435 aa22.14■■□□□ 1.14
PDAP1-202ENST00000426447 FOXO3O43524 673 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms