RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 NUTM2DQ5VT03 806 aaPredicted RBP27.56■■■□□ 2
SMARCAL1-205ENST00000425815 PLEKHG1Q9ULL1 1385 aa27.55■■■□□ 2
SMARCAL1-205ENST00000425815 KCNA6P17658 529 aa27.54■■■□□ 2
SMARCAL1-205ENST00000425815 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.54■■■□□ 2
SMARCAL1-205ENST00000425815 SLC4A1APQ9BWU0 796 aaKnown RBP27.53■■■□□ 2
SMARCAL1-205ENST00000425815 PPP1R15AO75807 674 aaPredicted RBP27.52■■■□□ 2
SMARCAL1-205ENST00000425815 BCANQ96GW7 911 aa27.52■■■□□ 2
SMARCAL1-205ENST00000425815 MYO5BQ9ULV0 1848 aa27.51■■□□□ 1.99
SMARCAL1-205ENST00000425815 TOM1O60784 492 aa27.51■■□□□ 1.99
SMARCAL1-205ENST00000425815 TBX22Q9Y458 520 aa27.48■■□□□ 1.99
SMARCAL1-205ENST00000425815 PIP4K2BP78356 416 aa27.47■■□□□ 1.99
SMARCAL1-205ENST00000425815 ALKQ9UM73 1620 aa27.47■■□□□ 1.99
SMARCAL1-205ENST00000425815 FOXD1Q16676 465 aa27.46■■□□□ 1.99
SMARCAL1-205ENST00000425815 SPHKAPQ2M3C7 1700 aa27.46■■□□□ 1.99
SMARCAL1-205ENST00000425815 TRPM2O94759 1503 aa27.46■■□□□ 1.99
SMARCAL1-205ENST00000425815 ADAMTS13Q76LX8 1427 aa27.45■■□□□ 1.98
SMARCAL1-205ENST00000425815 RBM33Q96EV2 1170 aaKnown RBP27.43■■□□□ 1.98
SMARCAL1-205ENST00000425815 MPHOSPH9Q99550 1183 aa27.43■■□□□ 1.98
SMARCAL1-205ENST00000425815 CLTCL1P53675 1640 aa27.42■■□□□ 1.98
SMARCAL1-205ENST00000425815 ZNF326Q5BKZ1 582 aaKnown RBP27.42■■□□□ 1.98
SMARCAL1-205ENST00000425815 TMEM94Q12767 1356 aa27.41■■□□□ 1.98
SMARCAL1-205ENST00000425815 PROSER2Q86WR7 435 aaPredicted RBP27.41■■□□□ 1.98
SMARCAL1-205ENST00000425815 SETD5Q9C0A6 1442 aa27.41■■□□□ 1.98
SMARCAL1-205ENST00000425815 SCAF1Q9H7N4 1312 aaKnown RBP27.4■■□□□ 1.98
SMARCAL1-205ENST00000425815 HSPA1LP34931 641 aa27.37■■□□□ 1.97
SMARCAL1-205ENST00000425815 NWD1Q149M9 1564 aa27.35■■□□□ 1.97
SMARCAL1-205ENST00000425815 XIRP1Q702N8 1843 aaKnown RBP27.33■■□□□ 1.97
SMARCAL1-205ENST00000425815 NKTRP30414 1462 aaKnown RBP27.32■■□□□ 1.96
SMARCAL1-205ENST00000425815 PIK3R4Q99570 1358 aa27.32■■□□□ 1.96
SMARCAL1-205ENST00000425815 RAB3GAP2Q9H2M9 1393 aa27.32■■□□□ 1.96
SMARCAL1-205ENST00000425815 PTPRUQ92729 1446 aa27.32■■□□□ 1.96
SMARCAL1-205ENST00000425815 NEXMIFQ5QGS0 1516 aa27.31■■□□□ 1.96
SMARCAL1-205ENST00000425815 AMOTL2Q9Y2J4 779 aa27.29■■□□□ 1.96
SMARCAL1-205ENST00000425815 ACIN1Q9UKV3 1341 aaKnown RBP27.29■■□□□ 1.96
SMARCAL1-205ENST00000425815 CHD2O14647 1828 aaKnown RBP27.28■■□□□ 1.96
SMARCAL1-205ENST00000425815 DIP2AQ14689 1571 aa27.28■■□□□ 1.96
SMARCAL1-205ENST00000425815 NRXN3Q9Y4C0 1643 aa27.27■■□□□ 1.96
SMARCAL1-205ENST00000425815 SETBP1Q9Y6X0 1596 aa27.27■■□□□ 1.96
SMARCAL1-205ENST00000425815 METP08581 1390 aa27.27■■□□□ 1.96
SMARCAL1-205ENST00000425815 RPGRIP1LQ68CZ1 1315 aa27.27■■□□□ 1.96
SMARCAL1-205ENST00000425815 VGFO15240 615 aaPredicted RBP27.25■■□□□ 1.95
SMARCAL1-205ENST00000425815 CCDC144AA2RUR9 1427 aa27.22■■□□□ 1.95
SMARCAL1-205ENST00000425815 NCOA3Q9Y6Q9 1424 aa27.22■■□□□ 1.95
SMARCAL1-205ENST00000425815 KIF1BO60333 1816 aa27.21■■□□□ 1.95
SMARCAL1-205ENST00000425815 SPATA31E1Q6ZUB1 1445 aa27.21■■□□□ 1.95
SMARCAL1-205ENST00000425815 HRCP23327 699 aa27.2■■□□□ 1.94
SMARCAL1-205ENST00000425815 RGL3Q3MIN7 710 aa27.2■■□□□ 1.94
SMARCAL1-205ENST00000425815 FAM135BQ49AJ0 1406 aa27.2■■□□□ 1.94
SMARCAL1-205ENST00000425815 MSH6P52701 1360 aa27.2■■□□□ 1.94
SMARCAL1-205ENST00000425815 SLAIN2Q9P270 581 aa27.17■■□□□ 1.94
SMARCAL1-205ENST00000425815 C19orf44Q9H6X5 657 aa27.16■■□□□ 1.94
SMARCAL1-205ENST00000425815 DISP3Q9P2K9 1392 aa27.16■■□□□ 1.94
SMARCAL1-205ENST00000425815 ADGRF5Q8IZF2 1346 aa27.16■■□□□ 1.94
SMARCAL1-205ENST00000425815 C14orf37Q86TY3 774 aa27.12■■□□□ 1.93
SMARCAL1-205ENST00000425815 XRN1Q8IZH2 1706 aaKnown RBP27.1■■□□□ 1.93
SMARCAL1-205ENST00000425815 ANKRD30BQ9BXX2 1392 aa27.09■■□□□ 1.93
SMARCAL1-205ENST00000425815 CADPS2Q86UW7 1296 aa27.08■■□□□ 1.93
SMARCAL1-205ENST00000425815 PPLO60437 1756 aa27.07■■□□□ 1.92
SMARCAL1-205ENST00000425815 ATF3P18847 181 aa27.05■■□□□ 1.92
SMARCAL1-205ENST00000425815 ILDR2Q71H61 639 aa27.05■■□□□ 1.92
SMARCAL1-205ENST00000425815 SETD1AO15047 1707 aaKnown RBP27.03■■□□□ 1.92
SMARCAL1-205ENST00000425815 ROBO2Q9HCK4 1378 aa27.03■■□□□ 1.92
SMARCAL1-205ENST00000425815 ROBO1Q9Y6N7 1651 aa27.03■■□□□ 1.92
SMARCAL1-205ENST00000425815 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.02■■□□□ 1.92
SMARCAL1-205ENST00000425815 PTCH1Q13635 1447 aa26.99■■□□□ 1.91
SMARCAL1-205ENST00000425815 PRAG1Q86YV5 1406 aa26.99■■□□□ 1.91
SMARCAL1-205ENST00000425815 PIK3C2GO75747 1445 aa26.98■■□□□ 1.91
SMARCAL1-205ENST00000425815 DCCP43146 1447 aa26.98■■□□□ 1.91
SMARCAL1-205ENST00000425815 TMEM132EQ6IEE7 984 aa26.97■■□□□ 1.91
SMARCAL1-205ENST00000425815 BRINP3Q76B58 766 aa26.96■■□□□ 1.91
SMARCAL1-205ENST00000425815 C14orf93Q9H972 538 aaKnown RBP26.96■■□□□ 1.91
SMARCAL1-205ENST00000425815 ADGRL3Q9HAR2 1447 aa26.96■■□□□ 1.91
SMARCAL1-205ENST00000425815 MED1Q15648 1581 aaPredicted RBP26.96■■□□□ 1.91
SMARCAL1-205ENST00000425815 IFT172Q9UG01 1749 aa26.96■■□□□ 1.91
SMARCAL1-205ENST00000425815 MST1RQ04912 1400 aa26.94■■□□□ 1.9
SMARCAL1-205ENST00000425815 NRXN1Q9ULB1 1477 aa26.93■■□□□ 1.9
SMARCAL1-205ENST00000425815 STK26Q9P289 416 aa26.93■■□□□ 1.9
SMARCAL1-205ENST00000425815 CFAP70Q5T0N1 1121 aa26.92■■□□□ 1.9
SMARCAL1-205ENST00000425815 LRPPRCP42704 1394 aaKnown RBP26.91■■□□□ 1.9
SMARCAL1-205ENST00000425815 ASXL1Q8IXJ9 1541 aa26.9■■□□□ 1.9
SMARCAL1-205ENST00000425815 ABCC11Q96J66 1382 aa26.9■■□□□ 1.9
SMARCAL1-205ENST00000425815 WAPLQ7Z5K2 1190 aa26.9■■□□□ 1.9
SMARCAL1-205ENST00000425815 MYOM2P54296 1465 aa26.89■■□□□ 1.9
SMARCAL1-205ENST00000425815 TECPR2O15040 1411 aa26.87■■□□□ 1.89
SMARCAL1-205ENST00000425815 KDM2AQ9Y2K7 1162 aa26.86■■□□□ 1.89
SMARCAL1-205ENST00000425815 DHX57Q6P158 1386 aaKnown RBP26.85■■□□□ 1.89
SMARCAL1-205ENST00000425815 NALCNQ8IZF0 1738 aa26.85■■□□□ 1.89
SMARCAL1-205ENST00000425815 DCAF11Q8TEB1 546 aa26.85■■□□□ 1.89
SMARCAL1-205ENST00000425815 PLEKHH1Q9ULM0 1364 aa26.84■■□□□ 1.89
SMARCAL1-205ENST00000425815 YTHDC2Q9H6S0 1430 aaKnown RBP26.84■■□□□ 1.89
SMARCAL1-205ENST00000425815 C1orf167Q5SNV9 1468 aa26.83■■□□□ 1.89
SMARCAL1-205ENST00000425815 SIRT1Q96EB6 747 aa26.83■■□□□ 1.89
SMARCAL1-205ENST00000425815 AHDC1Q5TGY3 1603 aaPredicted RBP26.83■■□□□ 1.88
SMARCAL1-205ENST00000425815 JCADQ9P266 1359 aa26.83■■□□□ 1.88
SMARCAL1-205ENST00000425815 PHLPP1O60346 1717 aa26.82■■□□□ 1.88
SMARCAL1-205ENST00000425815 DDX17Q92841 729 aaKnown RBP26.82■■□□□ 1.88
SMARCAL1-205ENST00000425815 RGS17Q9UGC6 210 aaPredicted RBP26.82■■□□□ 1.88
SMARCAL1-205ENST00000425815 COL16A1Q07092 1604 aaPredicted RBP26.82■■□□□ 1.88
SMARCAL1-205ENST00000425815 ORAI2Q96SN7 254 aa26.81■■□□□ 1.88
SMARCAL1-205ENST00000425815 STAC3Q96MF2 364 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms