RNA–Protein interactions for RNA: ENST00000425731.7

ZIC4-202, Transcript of Zic family member 4, humanhuman

TSL 2 BASIC

Gene ZIC4, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-202ENST00000425731 NAIPQ13075 1403 aa13.44□□□□□ -0.26
ZIC4-202ENST00000425731 TOPBP1Q92547 1522 aa13.44□□□□□ -0.26
ZIC4-202ENST00000425731 ELL2O00472 640 aaPredicted RBP13.43□□□□□ -0.26
ZIC4-202ENST00000425731 MRC2Q9UBG0 1479 aa13.43□□□□□ -0.26
ZIC4-202ENST00000425731 CBX1P83916 185 aa13.43□□□□□ -0.26
ZIC4-202ENST00000425731 CSPP1Q1MSJ5 1256 aa13.43□□□□□ -0.26
ZIC4-202ENST00000425731 CARMIL2Q6F5E8 1435 aa13.43□□□□□ -0.26
ZIC4-202ENST00000425731 A0A0G2JS52 829 aa13.42□□□□□ -0.26
ZIC4-202ENST00000425731 TNNT3P45378 269 aaPredicted RBP13.42□□□□□ -0.26
ZIC4-202ENST00000425731 MYOM3Q5VTT5 1437 aa13.42□□□□□ -0.26
ZIC4-202ENST00000425731 ZKSCAN2Q63HK3 967 aa13.42□□□□□ -0.26
ZIC4-202ENST00000425731 PRPF40AO75400 957 aaKnown RBP13.42□□□□□ -0.26
ZIC4-202ENST00000425731 KIF3BO15066 747 aa13.41□□□□□ -0.26
ZIC4-202ENST00000425731 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
ZIC4-202ENST00000425731 POLA1P09884 1462 aaPredicted RBP13.41□□□□□ -0.26
ZIC4-202ENST00000425731 RNF123Q5XPI4 1314 aa13.4□□□□□ -0.26
ZIC4-202ENST00000425731 DZIP1LQ8IYY4 767 aaKnown RBP13.4□□□□□ -0.26
ZIC4-202ENST00000425731 SOX12O15370 315 aa13.39□□□□□ -0.27
ZIC4-202ENST00000425731 IPO8O15397 1037 aaKnown RBP13.39□□□□□ -0.27
ZIC4-202ENST00000425731 LMOD2Q6P5Q4 547 aa13.39□□□□□ -0.27
ZIC4-202ENST00000425731 PPP2R1AP30153 589 aa13.39□□□□□ -0.27
ZIC4-202ENST00000425731 SYAP1Q96A49 352 aaPredicted RBP13.39□□□□□ -0.27
ZIC4-202ENST00000425731 STK26Q9P289 416 aa13.39□□□□□ -0.27
ZIC4-202ENST00000425731 LAMC3Q9Y6N6 1575 aa13.39□□□□□ -0.27
ZIC4-202ENST00000425731 TNPO1Q92973 898 aaKnown RBP13.39□□□□□ -0.27
ZIC4-202ENST00000425731 TAOK2Q9UL54 1235 aa13.39□□□□□ -0.27
ZIC4-202ENST00000425731 PTPRGP23470 1445 aa13.38□□□□□ -0.27
ZIC4-202ENST00000425731 ZNF592Q92610 1267 aa13.38□□□□□ -0.27
ZIC4-202ENST00000425731 MAP3K1Q13233 1512 aa13.38□□□□□ -0.27
ZIC4-202ENST00000425731 GOLGA6L4A6NEF3 574 aa13.38□□□□□ -0.27
ZIC4-202ENST00000425731 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
ZIC4-202ENST00000425731 MTERF4Q7Z6M4 381 aaKnown RBP13.38□□□□□ -0.27
ZIC4-202ENST00000425731 NCOA2Q15596 1464 aa13.38□□□□□ -0.27
ZIC4-202ENST00000425731 ST18O60284 1047 aa13.37□□□□□ -0.27
ZIC4-202ENST00000425731 EFCAB2Q5VUJ9 269 aa13.37□□□□□ -0.27
ZIC4-202ENST00000425731 IGSF3O75054 1194 aa13.36□□□□□ -0.27
ZIC4-202ENST00000425731 CHMP3Q9Y3E7 222 aa13.36□□□□□ -0.27
ZIC4-202ENST00000425731 PDE3AQ14432 1141 aa13.36□□□□□ -0.27
ZIC4-202ENST00000425731 ERICH3Q5RHP9 1530 aa13.36□□□□□ -0.27
ZIC4-202ENST00000425731 ISY1Q9ULR0 285 aaKnown RBP13.35□□□□□ -0.27
ZIC4-202ENST00000425731 ANKRD30AQ9BXX3 1397 aa13.35□□□□□ -0.27
ZIC4-202ENST00000425731 SLFN5Q08AF3 891 aa13.35□□□□□ -0.27
ZIC4-202ENST00000425731 TBC1D32Q96NH3 1257 aa13.35□□□□□ -0.27
ZIC4-202ENST00000425731 SSFA2P28290 1259 aa13.35□□□□□ -0.27
ZIC4-202ENST00000425731 FAM69CQ0P6D2 419 aa13.35□□□□□ -0.27
ZIC4-202ENST00000425731 CCDC39Q9UFE4 941 aa13.35□□□□□ -0.27
ZIC4-202ENST00000425731 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
ZIC4-202ENST00000425731 NUTM2FA1L443 756 aa13.34□□□□□ -0.27
ZIC4-202ENST00000425731 PTPRKQ15262 1439 aa13.33□□□□□ -0.27
ZIC4-202ENST00000425731 SPDYE4A6NLX3 237 aa13.33□□□□□ -0.28
ZIC4-202ENST00000425731 NUCB2P80303 420 aa13.32□□□□□ -0.28
ZIC4-202ENST00000425731 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.32□□□□□ -0.28
ZIC4-202ENST00000425731 TCP11L2Q8N4U5 519 aa13.32□□□□□ -0.28
ZIC4-202ENST00000425731 DDX19BQ9UMR2 479 aa13.32□□□□□ -0.28
ZIC4-202ENST00000425731 SYCE3A1L190 88 aa13.31□□□□□ -0.28
ZIC4-202ENST00000425731 PDE4CQ08493 712 aa13.31□□□□□ -0.28
ZIC4-202ENST00000425731 C1orf115Q9H7X2 142 aa13.31□□□□□ -0.28
ZIC4-202ENST00000425731 TSR2Q969E8 191 aaKnown RBP13.31□□□□□ -0.28
ZIC4-202ENST00000425731 CHMP4BQ9H444 224 aaKnown RBP13.31□□□□□ -0.28
ZIC4-202ENST00000425731 FAM177BA6PVY3 158 aa13.3□□□□□ -0.28
ZIC4-202ENST00000425731 MCCP23508 829 aa13.3□□□□□ -0.28
ZIC4-202ENST00000425731 ZRSR1Q15695 479 aaKnown RBP13.3□□□□□ -0.28
ZIC4-202ENST00000425731 CGNQ9P2M7 1197 aaKnown RBP13.3□□□□□ -0.28
ZIC4-202ENST00000425731 DNMBPQ6XZF7 1577 aa13.3□□□□□ -0.28
ZIC4-202ENST00000425731 TRIM6-TRIM34B2RNG4 842 aa13.3□□□□□ -0.28
ZIC4-202ENST00000425731 URB2Q14146 1524 aaKnown RBP13.3□□□□□ -0.28
ZIC4-202ENST00000425731 AFAP1Q8N556 730 aa13.3□□□□□ -0.28
ZIC4-202ENST00000425731 EIF3AQ14152 1382 aaKnown RBP13.3□□□□□ -0.28
ZIC4-202ENST00000425731 K7ELQ4 463 aaPredicted RBP13.3□□□□□ -0.28
ZIC4-202ENST00000425731 NPHP1O15259 732 aa13.3□□□□□ -0.28
ZIC4-202ENST00000425731 GRIN2BQ13224 1484 aa13.29□□□□□ -0.28
ZIC4-202ENST00000425731 SPC24Q8NBT2 197 aa13.29□□□□□ -0.28
ZIC4-202ENST00000425731 ANKRD30BQ9BXX2 1392 aa13.29□□□□□ -0.28
ZIC4-202ENST00000425731 CASKIN1Q8WXD9 1431 aa13.29□□□□□ -0.28
ZIC4-202ENST00000425731 IFT140Q96RY7 1462 aa13.29□□□□□ -0.28
ZIC4-202ENST00000425731 PCDHB15Q9Y5E8 787 aa13.29□□□□□ -0.28
ZIC4-202ENST00000425731 PHF14O94880 888 aa13.29□□□□□ -0.28
ZIC4-202ENST00000425731 KCNJ4P48050 445 aa13.29□□□□□ -0.28
ZIC4-202ENST00000425731 RBM27Q9P2N5 1060 aaKnown RBP13.28□□□□□ -0.28
ZIC4-202ENST00000425731 TNNQ9UQP3 1299 aa13.28□□□□□ -0.28
ZIC4-202ENST00000425731 TRERF1Q96PN7 1200 aa13.28□□□□□ -0.28
ZIC4-202ENST00000425731 CCDC144AA2RUR9 1427 aa13.27□□□□□ -0.28
ZIC4-202ENST00000425731 SPAG9O60271 1321 aaKnown RBP13.27□□□□□ -0.28
ZIC4-202ENST00000425731 DHX29Q7Z478 1369 aaKnown RBP13.27□□□□□ -0.28
ZIC4-202ENST00000425731 GOLGA6L6A8MZA4 724 aa13.27□□□□□ -0.29
ZIC4-202ENST00000425731 IFT57Q9NWB7 429 aa13.27□□□□□ -0.29
ZIC4-202ENST00000425731 ZNF830Q96NB3 372 aaPredicted RBP13.26□□□□□ -0.29
ZIC4-202ENST00000425731 KDM2BQ8NHM5 1336 aa13.26□□□□□ -0.29
ZIC4-202ENST00000425731 OFD1O75665 1012 aa13.26□□□□□ -0.29
ZIC4-202ENST00000425731 SASS6Q6UVJ0 657 aa13.26□□□□□ -0.29
ZIC4-202ENST00000425731 HMGN5P82970 282 aaKnown RBP13.26□□□□□ -0.29
ZIC4-202ENST00000425731 PPP4R3BQ5MIZ7 849 aa13.26□□□□□ -0.29
ZIC4-202ENST00000425731 EXOSC9Q06265 439 aaKnown RBP13.25□□□□□ -0.29
ZIC4-202ENST00000425731 RBM42Q9BTD8 480 aaKnown RBP13.25□□□□□ -0.29
ZIC4-202ENST00000425731 ERICH4A6NGS2 130 aa13.25□□□□□ -0.29
ZIC4-202ENST00000425731 PDCL2Q8N4E4 241 aa13.25□□□□□ -0.29
ZIC4-202ENST00000425731 RILPL2Q969X0 211 aa13.25□□□□□ -0.29
ZIC4-202ENST00000425731 MIA2Q96PC5 1412 aa13.25□□□□□ -0.29
ZIC4-202ENST00000425731 SRPK2P78362 688 aaKnown RBP13.25□□□□□ -0.29
ZIC4-202ENST00000425731 TSC1Q92574 1164 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms