RNA–Protein interactions for RNA: ENST00000425712.1

LINC01006-203, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 661 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-203ENST00000425712 ARHGAP23Q9P227 1491 aa13.61□□□□□ -0.23
LINC01006-203ENST00000425712 RGL3Q3MIN7 710 aa13.61□□□□□ -0.23
LINC01006-203ENST00000425712 THEMISQ8N1K5 641 aaPredicted RBP13.61□□□□□ -0.23
LINC01006-203ENST00000425712 TMEM2Q9UHN6 1383 aa13.6□□□□□ -0.23
LINC01006-203ENST00000425712 ZFYVE9O95405 1425 aa13.6□□□□□ -0.23
LINC01006-203ENST00000425712 L3MBTL2Q969R5 705 aa13.6□□□□□ -0.23
LINC01006-203ENST00000425712 RIMS2Q9UQ26 1411 aa13.6□□□□□ -0.23
LINC01006-203ENST00000425712 HDGFP51858 240 aaKnown RBP13.59□□□□□ -0.23
LINC01006-203ENST00000425712 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC01006-203ENST00000425712 LMTK3Q96Q04 1460 aa13.58□□□□□ -0.24
LINC01006-203ENST00000425712 NRXN1Q9ULB1 1477 aa13.58□□□□□ -0.24
LINC01006-203ENST00000425712 DCAF11Q8TEB1 546 aa13.57□□□□□ -0.24
LINC01006-203ENST00000425712 LAMC1P11047 1609 aa13.57□□□□□ -0.24
LINC01006-203ENST00000425712 PRAG1Q86YV5 1406 aa13.56□□□□□ -0.24
LINC01006-203ENST00000425712 POLR1AO95602 1720 aaPredicted RBP13.56□□□□□ -0.24
LINC01006-203ENST00000425712 SCAF11Q99590 1463 aaKnown RBP13.56□□□□□ -0.24
LINC01006-203ENST00000425712 VGFO15240 615 aaPredicted RBP13.56□□□□□ -0.24
LINC01006-203ENST00000425712 PIK3C2GO75747 1445 aa13.56□□□□□ -0.24
LINC01006-203ENST00000425712 PPP1R15AO75807 674 aaPredicted RBP13.55□□□□□ -0.24
LINC01006-203ENST00000425712 EID1Q9Y6B2 187 aa13.55□□□□□ -0.24
LINC01006-203ENST00000425712 KIAA1210Q9ULL0 1709 aa13.55□□□□□ -0.24
LINC01006-203ENST00000425712 SETBP1Q9Y6X0 1596 aa13.54□□□□□ -0.24
LINC01006-203ENST00000425712 KDM2AQ9Y2K7 1162 aa13.53□□□□□ -0.24
LINC01006-203ENST00000425712 PLEKHG1Q9ULL1 1385 aa13.53□□□□□ -0.24
LINC01006-203ENST00000425712 RALGAPBQ86X10 1494 aa13.53□□□□□ -0.24
LINC01006-203ENST00000425712 DIP2AQ14689 1571 aa13.53□□□□□ -0.24
LINC01006-203ENST00000425712 TRPM1Q7Z4N2 1603 aa13.53□□□□□ -0.24
LINC01006-203ENST00000425712 IQGAP1P46940 1657 aa13.51□□□□□ -0.25
LINC01006-203ENST00000425712 ADGRF5Q8IZF2 1346 aa13.51□□□□□ -0.25
LINC01006-203ENST00000425712 TXNDC2Q86VQ3 553 aa13.51□□□□□ -0.25
LINC01006-203ENST00000425712 ANKLE2Q86XL3 938 aa13.51□□□□□ -0.25
LINC01006-203ENST00000425712 NRXN3Q9Y4C0 1643 aa13.5□□□□□ -0.25
LINC01006-203ENST00000425712 MED14O60244 1454 aa13.5□□□□□ -0.25
LINC01006-203ENST00000425712 SETD1AO15047 1707 aaKnown RBP13.48□□□□□ -0.25
LINC01006-203ENST00000425712 LTKP29376 864 aa13.48□□□□□ -0.25
LINC01006-203ENST00000425712 NUTM2DQ5VT03 806 aaPredicted RBP13.48□□□□□ -0.25
LINC01006-203ENST00000425712 ALKQ9UM73 1620 aa13.48□□□□□ -0.25
LINC01006-203ENST00000425712 NPHP4O75161 1426 aaPredicted RBP13.47□□□□□ -0.25
LINC01006-203ENST00000425712 NBPF8Q3BBV2 869 aa13.47□□□□□ -0.25
LINC01006-203ENST00000425712 ROCK2O75116 1388 aaKnown RBP13.46□□□□□ -0.25
LINC01006-203ENST00000425712 GPRASP1Q5JY77 1395 aa13.46□□□□□ -0.25
LINC01006-203ENST00000425712 ADAMTS13Q76LX8 1427 aa13.46□□□□□ -0.26
LINC01006-203ENST00000425712 HSPA2P54652 639 aa13.45□□□□□ -0.26
LINC01006-203ENST00000425712 BCANQ96GW7 911 aa13.45□□□□□ -0.26
LINC01006-203ENST00000425712 C14orf93Q9H972 538 aaKnown RBP13.45□□□□□ -0.26
LINC01006-203ENST00000425712 ADGRB1O14514 1584 aa13.45□□□□□ -0.26
LINC01006-203ENST00000425712 ASXL1Q8IXJ9 1541 aa13.44□□□□□ -0.26
LINC01006-203ENST00000425712 STRCQ7RTU9 1775 aa13.43□□□□□ -0.26
LINC01006-203ENST00000425712 CFAP70Q5T0N1 1121 aa13.43□□□□□ -0.26
LINC01006-203ENST00000425712 PIK3R4Q99570 1358 aa13.43□□□□□ -0.26
LINC01006-203ENST00000425712 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
LINC01006-203ENST00000425712 KNDC1Q76NI1 1749 aa13.42□□□□□ -0.26
LINC01006-203ENST00000425712 CARD11Q9BXL7 1154 aa13.41□□□□□ -0.26
LINC01006-203ENST00000425712 TBX22Q9Y458 520 aa13.41□□□□□ -0.26
LINC01006-203ENST00000425712 EIF3AQ14152 1382 aaKnown RBP13.41□□□□□ -0.26
LINC01006-203ENST00000425712 YTHDC2Q9H6S0 1430 aaKnown RBP13.39□□□□□ -0.27
LINC01006-203ENST00000425712 DLC1Q96QB1 1528 aa13.39□□□□□ -0.27
LINC01006-203ENST00000425712 DMRT2Q9Y5R5 561 aa13.39□□□□□ -0.27
LINC01006-203ENST00000425712 LRPPRCP42704 1394 aaKnown RBP13.39□□□□□ -0.27
LINC01006-203ENST00000425712 NWD1Q149M9 1564 aa13.39□□□□□ -0.27
LINC01006-203ENST00000425712 XRN1Q8IZH2 1706 aaKnown RBP13.39□□□□□ -0.27
LINC01006-203ENST00000425712 CPS1P31327 1500 aa13.39□□□□□ -0.27
LINC01006-203ENST00000425712 TECPR2O15040 1411 aa13.39□□□□□ -0.27
LINC01006-203ENST00000425712 METP08581 1390 aa13.38□□□□□ -0.27
LINC01006-203ENST00000425712 USP47Q96K76 1375 aa13.38□□□□□ -0.27
LINC01006-203ENST00000425712 NBPF1Q3BBV0 1214 aa13.38□□□□□ -0.27
LINC01006-203ENST00000425712 SLC26A8Q96RN1 970 aa13.38□□□□□ -0.27
LINC01006-203ENST00000425712 ARHGEF28Q8N1W1 1705 aaKnown RBP13.38□□□□□ -0.27
LINC01006-203ENST00000425712 SENP3Q9H4L4 574 aaPredicted RBP13.37□□□□□ -0.27
LINC01006-203ENST00000425712 PTCH1Q13635 1447 aa13.37□□□□□ -0.27
LINC01006-203ENST00000425712 ABCC11Q96J66 1382 aa13.36□□□□□ -0.27
LINC01006-203ENST00000425712 CHD2O14647 1828 aaKnown RBP13.36□□□□□ -0.27
LINC01006-203ENST00000425712 NKTRP30414 1462 aaKnown RBP13.36□□□□□ -0.27
LINC01006-203ENST00000425712 EIF4G2P78344 907 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC01006-203ENST00000425712 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
LINC01006-203ENST00000425712 FAM135BQ49AJ0 1406 aa13.34□□□□□ -0.27
LINC01006-203ENST00000425712 PTPRUQ92729 1446 aa13.34□□□□□ -0.27
LINC01006-203ENST00000425712 QRICH2Q9H0J4 1663 aa13.32□□□□□ -0.28
LINC01006-203ENST00000425712 TRAK1Q9UPV9 953 aa13.32□□□□□ -0.28
LINC01006-203ENST00000425712 SBNO2Q9Y2G9 1366 aa13.32□□□□□ -0.28
LINC01006-203ENST00000425712 KCNA6P17658 529 aa13.31□□□□□ -0.28
LINC01006-203ENST00000425712 SIRT1Q96EB6 747 aa13.31□□□□□ -0.28
LINC01006-203ENST00000425712 STK26Q9P289 416 aa13.31□□□□□ -0.28
LINC01006-203ENST00000425712 AMOTL2Q9Y2J4 779 aa13.31□□□□□ -0.28
LINC01006-203ENST00000425712 CENPJQ9HC77 1338 aaPredicted RBP13.31□□□□□ -0.28
LINC01006-203ENST00000425712 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
LINC01006-203ENST00000425712 HSPA5P11021 654 aaKnown RBP13.29□□□□□ -0.28
LINC01006-203ENST00000425712 ROBO2Q9HCK4 1378 aa13.29□□□□□ -0.28
LINC01006-203ENST00000425712 ADGRB2O60241 1585 aa13.28□□□□□ -0.28
LINC01006-203ENST00000425712 POGKQ9P215 609 aa13.28□□□□□ -0.28
LINC01006-203ENST00000425712 ST20-MTHFSA0A0A6YYL1 179 aa13.27□□□□□ -0.29
LINC01006-203ENST00000425712 PRAM1Q96QH2 718 aa13.27□□□□□ -0.29
LINC01006-203ENST00000425712 STRCP1A6NGW2 1772 aa13.27□□□□□ -0.29
LINC01006-203ENST00000425712 NCOA3Q9Y6Q9 1424 aa13.26□□□□□ -0.29
LINC01006-203ENST00000425712 ADGRL3Q9HAR2 1447 aa13.24□□□□□ -0.29
LINC01006-203ENST00000425712 PLEKHH1Q9ULM0 1364 aa13.24□□□□□ -0.29
LINC01006-203ENST00000425712 ZNF335Q9H4Z2 1342 aaPredicted RBP13.24□□□□□ -0.29
LINC01006-203ENST00000425712 NALCNQ8IZF0 1738 aa13.24□□□□□ -0.29
LINC01006-203ENST00000425712 CDC42BPGQ6DT37 1551 aa13.24□□□□□ -0.29
LINC01006-203ENST00000425712 TMF1P82094 1093 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms