RNA–Protein interactions for RNA: ENST00000425441.5

CCDC12-202, Transcript of coiled-coil domain containing 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC12, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-202ENST00000425441 U3KPZ7 1027 aaPredicted RBP20.36■□□□□ 0.85
CCDC12-202ENST00000425441 NOS1P29475 1434 aa20.34■□□□□ 0.85
CCDC12-202ENST00000425441 IDI1Q13907 227 aa20.33■□□□□ 0.85
CCDC12-202ENST00000425441 ADGRB3O60242 1522 aa20.32■□□□□ 0.84
CCDC12-202ENST00000425441 FAM50AQ14320 339 aaKnown RBP20.32■□□□□ 0.84
CCDC12-202ENST00000425441 RPRD2Q5VT52 1461 aaKnown RBP20.31■□□□□ 0.84
CCDC12-202ENST00000425441 ANKRD50Q9ULJ7 1429 aa20.31■□□□□ 0.84
CCDC12-202ENST00000425441 SLC52A1Q9NWF4 448 aa20.31■□□□□ 0.84
CCDC12-202ENST00000425441 XIRP1Q702N8 1843 aaKnown RBP20.3■□□□□ 0.84
CCDC12-202ENST00000425441 TET3O43151 1660 aa20.27■□□□□ 0.84
CCDC12-202ENST00000425441 KCNA6P17658 529 aa20.26■□□□□ 0.83
CCDC12-202ENST00000425441 GCC2Q8IWJ2 1684 aa20.25■□□□□ 0.83
CCDC12-202ENST00000425441 NKTRP30414 1462 aaKnown RBP20.24■□□□□ 0.83
CCDC12-202ENST00000425441 TMEM94Q12767 1356 aa20.23■□□□□ 0.83
CCDC12-202ENST00000425441 UNC13BO14795 1591 aa20.23■□□□□ 0.83
CCDC12-202ENST00000425441 HDGFP51858 240 aaKnown RBP20.23■□□□□ 0.83
CCDC12-202ENST00000425441 NWD1Q149M9 1564 aa20.23■□□□□ 0.83
CCDC12-202ENST00000425441 FAM135BQ49AJ0 1406 aa20.22■□□□□ 0.83
CCDC12-202ENST00000425441 BCANQ96GW7 911 aa20.22■□□□□ 0.83
CCDC12-202ENST00000425441 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
CCDC12-202ENST00000425441 PROSER2Q86WR7 435 aaPredicted RBP20.21■□□□□ 0.83
CCDC12-202ENST00000425441 ROCK1Q13464 1354 aa20.19■□□□□ 0.82
CCDC12-202ENST00000425441 PLEKHG1Q9ULL1 1385 aa20.19■□□□□ 0.82
CCDC12-202ENST00000425441 MYO5BQ9ULV0 1848 aa20.18■□□□□ 0.82
CCDC12-202ENST00000425441 TMEM131LA2VDJ0 1609 aa20.18■□□□□ 0.82
CCDC12-202ENST00000425441 ZFYVE9O95405 1425 aa20.18■□□□□ 0.82
CCDC12-202ENST00000425441 PPP1R15AO75807 674 aaPredicted RBP20.17■□□□□ 0.82
CCDC12-202ENST00000425441 RIMS2Q9UQ26 1411 aa20.17■□□□□ 0.82
CCDC12-202ENST00000425441 KCNA4P22459 653 aa20.15■□□□□ 0.82
CCDC12-202ENST00000425441 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.15■□□□□ 0.82
CCDC12-202ENST00000425441 MSH6P52701 1360 aa20.15■□□□□ 0.82
CCDC12-202ENST00000425441 IQGAP3Q86VI3 1631 aa20.15■□□□□ 0.82
CCDC12-202ENST00000425441 E9PCH4 1651 aa20.15■□□□□ 0.82
CCDC12-202ENST00000425441 ROBO1Q9Y6N7 1651 aa20.15■□□□□ 0.82
CCDC12-202ENST00000425441 CHD2O14647 1828 aaKnown RBP20.14■□□□□ 0.81
CCDC12-202ENST00000425441 CAPN15O75808 1086 aa20.13■□□□□ 0.81
CCDC12-202ENST00000425441 SPINK5Q9NQ38 1064 aaPredicted RBP20.13■□□□□ 0.81
CCDC12-202ENST00000425441 CHGAP10645 457 aaKnown RBP20.12■□□□□ 0.81
CCDC12-202ENST00000425441 TBX22Q9Y458 520 aa20.11■□□□□ 0.81
CCDC12-202ENST00000425441 DIP2AQ14689 1571 aa20.11■□□□□ 0.81
CCDC12-202ENST00000425441 DSG3P32926 999 aa20.1■□□□□ 0.81
CCDC12-202ENST00000425441 NCOA3Q9Y6Q9 1424 aa20.1■□□□□ 0.81
CCDC12-202ENST00000425441 RBM33Q96EV2 1170 aaKnown RBP20.09■□□□□ 0.81
CCDC12-202ENST00000425441 NUP155O75694 1391 aa20.08■□□□□ 0.8
CCDC12-202ENST00000425441 PIK3R4Q99570 1358 aa20.07■□□□□ 0.8
CCDC12-202ENST00000425441 PHLPP1O60346 1717 aa20.05■□□□□ 0.8
CCDC12-202ENST00000425441 SLAIN2Q9P270 581 aa20.05■□□□□ 0.8
CCDC12-202ENST00000425441 ADAMTS13Q76LX8 1427 aa20.04■□□□□ 0.8
CCDC12-202ENST00000425441 ITGAEP38570 1179 aa20.04■□□□□ 0.8
CCDC12-202ENST00000425441 TRPM2O94759 1503 aa20.03■□□□□ 0.8
CCDC12-202ENST00000425441 C14orf37Q86TY3 774 aa20.02■□□□□ 0.8
CCDC12-202ENST00000425441 RGS17Q9UGC6 210 aaPredicted RBP20.02■□□□□ 0.8
CCDC12-202ENST00000425441 JCADQ9P266 1359 aa20.01■□□□□ 0.79
CCDC12-202ENST00000425441 SPHKAPQ2M3C7 1700 aa20.01■□□□□ 0.79
CCDC12-202ENST00000425441 NUTM2DQ5VT03 806 aaPredicted RBP20■□□□□ 0.79
CCDC12-202ENST00000425441 CADPS2Q86UW7 1296 aa19.99■□□□□ 0.79
CCDC12-202ENST00000425441 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.98■□□□□ 0.79
CCDC12-202ENST00000425441 SLC4A2P04920 1241 aa19.97■□□□□ 0.79
CCDC12-202ENST00000425441 C19orf44Q9H6X5 657 aa19.97■□□□□ 0.79
CCDC12-202ENST00000425441 COL16A1Q07092 1604 aaPredicted RBP19.96■□□□□ 0.79
CCDC12-202ENST00000425441 ATF3P18847 181 aa19.96■□□□□ 0.79
CCDC12-202ENST00000425441 AMOTL2Q9Y2J4 779 aa19.95■□□□□ 0.78
CCDC12-202ENST00000425441 SETBP1Q9Y6X0 1596 aa19.95■□□□□ 0.78
CCDC12-202ENST00000425441 AHDC1Q5TGY3 1603 aaPredicted RBP19.94■□□□□ 0.78
CCDC12-202ENST00000425441 POTEAQ6S8J7 498 aa19.93■□□□□ 0.78
CCDC12-202ENST00000425441 NRXN3Q9Y4C0 1643 aa19.92■□□□□ 0.78
CCDC12-202ENST00000425441 ZNF326Q5BKZ1 582 aaKnown RBP19.92■□□□□ 0.78
CCDC12-202ENST00000425441 PPARGC1BQ86YN6 1023 aaKnown RBP19.92■□□□□ 0.78
CCDC12-202ENST00000425441 SPATA31A6Q5VVP1 1343 aa19.92■□□□□ 0.78
CCDC12-202ENST00000425441 DCCP43146 1447 aa19.92■□□□□ 0.78
CCDC12-202ENST00000425441 PTPRUQ92729 1446 aa19.92■□□□□ 0.78
CCDC12-202ENST00000425441 XRN1Q8IZH2 1706 aaKnown RBP19.91■□□□□ 0.78
CCDC12-202ENST00000425441 RRBP1Q9P2E9 1410 aaKnown RBP19.9■□□□□ 0.78
CCDC12-202ENST00000425441 SHPRHQ149N8 1683 aa19.89■□□□□ 0.77
CCDC12-202ENST00000425441 KIF1BO60333 1816 aa19.88■□□□□ 0.77
CCDC12-202ENST00000425441 CLTCL1P53675 1640 aa19.87■□□□□ 0.77
CCDC12-202ENST00000425441 NEXMIFQ5QGS0 1516 aa19.86■□□□□ 0.77
CCDC12-202ENST00000425441 NAIPQ13075 1403 aa19.85■□□□□ 0.77
CCDC12-202ENST00000425441 MEX3CQ5U5Q3 659 aaKnown RBP19.85■□□□□ 0.77
CCDC12-202ENST00000425441 BRINP3Q76B58 766 aa19.84■□□□□ 0.77
CCDC12-202ENST00000425441 LRP6O75581 1613 aa19.84■□□□□ 0.77
CCDC12-202ENST00000425441 ZNF772Q68DY9 489 aaPredicted RBP19.83■□□□□ 0.77
CCDC12-202ENST00000425441 METP08581 1390 aa19.83■□□□□ 0.76
CCDC12-202ENST00000425441 ASXL1Q8IXJ9 1541 aa19.82■□□□□ 0.76
CCDC12-202ENST00000425441 MST1RQ04912 1400 aa19.82■□□□□ 0.76
CCDC12-202ENST00000425441 ADGRL3Q9HAR2 1447 aa19.81■□□□□ 0.76
CCDC12-202ENST00000425441 NHSL1Q5SYE7 1610 aa19.8■□□□□ 0.76
CCDC12-202ENST00000425441 TRIM52Q96A61 297 aa19.79■□□□□ 0.76
CCDC12-202ENST00000425441 SETD5Q9C0A6 1442 aa19.78■□□□□ 0.76
CCDC12-202ENST00000425441 VGFO15240 615 aaPredicted RBP19.78■□□□□ 0.76
CCDC12-202ENST00000425441 SETD1AO15047 1707 aaKnown RBP19.78■□□□□ 0.76
CCDC12-202ENST00000425441 NALCNQ8IZF0 1738 aa19.78■□□□□ 0.76
CCDC12-202ENST00000425441 HFM1A2PYH4 1435 aa19.77■□□□□ 0.76
CCDC12-202ENST00000425441 LRRC59Q96AG4 307 aaKnown RBP19.76■□□□□ 0.75
CCDC12-202ENST00000425441 RPGRIP1LQ68CZ1 1315 aa19.76■□□□□ 0.75
CCDC12-202ENST00000425441 PTCH1Q13635 1447 aa19.75■□□□□ 0.75
CCDC12-202ENST00000425441 ZNF219Q9P2Y4 722 aaPredicted RBP19.74■□□□□ 0.75
CCDC12-202ENST00000425441 NUTM2BA6NNL0 878 aaPredicted RBP19.73■□□□□ 0.75
CCDC12-202ENST00000425441 NUTM2EB1AL46 878 aaPredicted RBP19.73■□□□□ 0.75
CCDC12-202ENST00000425441 NUTM2AQ8IVF1 878 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms