RNA–Protein interactions for RNA: ENST00000425424.3

SAPCD1-209, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SAPCD1, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-209ENST00000425424 RIMS2Q9UQ26 1411 aa23.84■■□□□ 1.41
SAPCD1-209ENST00000425424 TONSLQ96HA7 1378 aa23.83■■□□□ 1.41
SAPCD1-209ENST00000425424 NEUROD1Q13562 356 aa23.83■■□□□ 1.41
SAPCD1-209ENST00000425424 POLR1AO95602 1720 aaPredicted RBP23.81■■□□□ 1.4
SAPCD1-209ENST00000425424 HDGFP51858 240 aaKnown RBP23.81■■□□□ 1.4
SAPCD1-209ENST00000425424 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.81■■□□□ 1.4
SAPCD1-209ENST00000425424 SCAF11Q99590 1463 aaKnown RBP23.81■■□□□ 1.4
SAPCD1-209ENST00000425424 NRXN1Q9ULB1 1477 aa23.81■■□□□ 1.4
SAPCD1-209ENST00000425424 ZNF326Q5BKZ1 582 aaKnown RBP23.8■■□□□ 1.4
SAPCD1-209ENST00000425424 RGL3Q3MIN7 710 aa23.78■■□□□ 1.4
SAPCD1-209ENST00000425424 MED14O60244 1454 aa23.77■■□□□ 1.4
SAPCD1-209ENST00000425424 VGFO15240 615 aaPredicted RBP23.76■■□□□ 1.39
SAPCD1-209ENST00000425424 L3MBTL2Q969R5 705 aa23.76■■□□□ 1.39
SAPCD1-209ENST00000425424 EID1Q9Y6B2 187 aa23.76■■□□□ 1.39
SAPCD1-209ENST00000425424 SETBP1Q9Y6X0 1596 aa23.75■■□□□ 1.39
SAPCD1-209ENST00000425424 AEBP2Q6ZN18 517 aaPredicted RBP23.75■■□□□ 1.39
SAPCD1-209ENST00000425424 ANKLE2Q86XL3 938 aa23.74■■□□□ 1.39
SAPCD1-209ENST00000425424 PLEKHG1Q9ULL1 1385 aa23.74■■□□□ 1.39
SAPCD1-209ENST00000425424 PIK3C2GO75747 1445 aa23.74■■□□□ 1.39
SAPCD1-209ENST00000425424 DCAF11Q8TEB1 546 aa23.72■■□□□ 1.39
SAPCD1-209ENST00000425424 LAMC1P11047 1609 aa23.72■■□□□ 1.39
SAPCD1-209ENST00000425424 DIP2AQ14689 1571 aa23.71■■□□□ 1.39
SAPCD1-209ENST00000425424 PRAG1Q86YV5 1406 aa23.71■■□□□ 1.39
SAPCD1-209ENST00000425424 LTKP29376 864 aa23.71■■□□□ 1.39
SAPCD1-209ENST00000425424 TXNDC2Q86VQ3 553 aa23.71■■□□□ 1.39
SAPCD1-209ENST00000425424 STRCQ7RTU9 1775 aa23.7■■□□□ 1.39
SAPCD1-209ENST00000425424 NRXN3Q9Y4C0 1643 aa23.7■■□□□ 1.38
SAPCD1-209ENST00000425424 KIAA1210Q9ULL0 1709 aa23.69■■□□□ 1.38
SAPCD1-209ENST00000425424 IQGAP1P46940 1657 aa23.69■■□□□ 1.38
SAPCD1-209ENST00000425424 PPP1R15AO75807 674 aaPredicted RBP23.68■■□□□ 1.38
SAPCD1-209ENST00000425424 HSPA2P54652 639 aa23.68■■□□□ 1.38
SAPCD1-209ENST00000425424 NPHP4O75161 1426 aaPredicted RBP23.67■■□□□ 1.38
SAPCD1-209ENST00000425424 ADGRF5Q8IZF2 1346 aa23.66■■□□□ 1.38
SAPCD1-209ENST00000425424 SETD1AO15047 1707 aaKnown RBP23.65■■□□□ 1.38
SAPCD1-209ENST00000425424 TRPM1Q7Z4N2 1603 aa23.63■■□□□ 1.37
SAPCD1-209ENST00000425424 ADAMTS13Q76LX8 1427 aa23.63■■□□□ 1.37
SAPCD1-209ENST00000425424 ALKQ9UM73 1620 aa23.62■■□□□ 1.37
SAPCD1-209ENST00000425424 ZEB1P37275 1124 aaPredicted RBP23.61■■□□□ 1.37
SAPCD1-209ENST00000425424 KDM2AQ9Y2K7 1162 aa23.61■■□□□ 1.37
SAPCD1-209ENST00000425424 NCKAP5LQ9HCH0 1330 aa23.6■■□□□ 1.37
SAPCD1-209ENST00000425424 NUTM2DQ5VT03 806 aaPredicted RBP23.6■■□□□ 1.37
SAPCD1-209ENST00000425424 RALGAPBQ86X10 1494 aa23.6■■□□□ 1.37
SAPCD1-209ENST00000425424 PIK3R4Q99570 1358 aa23.58■■□□□ 1.37
SAPCD1-209ENST00000425424 C14orf93Q9H972 538 aaKnown RBP23.58■■□□□ 1.37
SAPCD1-209ENST00000425424 TBX22Q9Y458 520 aa23.57■■□□□ 1.36
SAPCD1-209ENST00000425424 DMRT2Q9Y5R5 561 aa23.57■■□□□ 1.36
SAPCD1-209ENST00000425424 ADGRB1O14514 1584 aa23.56■■□□□ 1.36
SAPCD1-209ENST00000425424 ASXL1Q8IXJ9 1541 aa23.55■■□□□ 1.36
SAPCD1-209ENST00000425424 GPRASP1Q5JY77 1395 aa23.54■■□□□ 1.36
SAPCD1-209ENST00000425424 NBPF8Q3BBV2 869 aa23.54■■□□□ 1.36
SAPCD1-209ENST00000425424 NWD1Q149M9 1564 aa23.52■■□□□ 1.36
SAPCD1-209ENST00000425424 CFAP70Q5T0N1 1121 aa23.5■■□□□ 1.35
SAPCD1-209ENST00000425424 KNDC1Q76NI1 1749 aa23.5■■□□□ 1.35
SAPCD1-209ENST00000425424 BCANQ96GW7 911 aa23.49■■□□□ 1.35
SAPCD1-209ENST00000425424 XRN1Q8IZH2 1706 aaKnown RBP23.49■■□□□ 1.35
SAPCD1-209ENST00000425424 SLC26A8Q96RN1 970 aa23.48■■□□□ 1.35
SAPCD1-209ENST00000425424 ROCK2O75116 1388 aaKnown RBP23.48■■□□□ 1.35
SAPCD1-209ENST00000425424 METP08581 1390 aa23.48■■□□□ 1.35
SAPCD1-209ENST00000425424 CHD2O14647 1828 aaKnown RBP23.47■■□□□ 1.35
SAPCD1-209ENST00000425424 TECPR2O15040 1411 aa23.47■■□□□ 1.35
SAPCD1-209ENST00000425424 LRPPRCP42704 1394 aaKnown RBP23.46■■□□□ 1.35
SAPCD1-209ENST00000425424 CPS1P31327 1500 aa23.45■■□□□ 1.34
SAPCD1-209ENST00000425424 DLC1Q96QB1 1528 aa23.45■■□□□ 1.34
SAPCD1-209ENST00000425424 YTHDC2Q9H6S0 1430 aaKnown RBP23.45■■□□□ 1.34
SAPCD1-209ENST00000425424 NKTRP30414 1462 aaKnown RBP23.44■■□□□ 1.34
SAPCD1-209ENST00000425424 PTCH1Q13635 1447 aa23.43■■□□□ 1.34
SAPCD1-209ENST00000425424 PTPRUQ92729 1446 aa23.43■■□□□ 1.34
SAPCD1-209ENST00000425424 ABCC11Q96J66 1382 aa23.43■■□□□ 1.34
SAPCD1-209ENST00000425424 NBPF1Q3BBV0 1214 aa23.42■■□□□ 1.34
SAPCD1-209ENST00000425424 ARHGEF28Q8N1W1 1705 aaKnown RBP23.39■■□□□ 1.34
SAPCD1-209ENST00000425424 KCNA6P17658 529 aa23.39■■□□□ 1.33
SAPCD1-209ENST00000425424 FAM135BQ49AJ0 1406 aa23.39■■□□□ 1.33
SAPCD1-209ENST00000425424 TMEM132EQ6IEE7 984 aa23.38■■□□□ 1.33
SAPCD1-209ENST00000425424 SIRT1Q96EB6 747 aa23.38■■□□□ 1.33
SAPCD1-209ENST00000425424 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
SAPCD1-209ENST00000425424 CARD11Q9BXL7 1154 aa23.37■■□□□ 1.33
SAPCD1-209ENST00000425424 STRCP1A6NGW2 1772 aa23.37■■□□□ 1.33
SAPCD1-209ENST00000425424 EIF3AQ14152 1382 aaKnown RBP23.36■■□□□ 1.33
SAPCD1-209ENST00000425424 AMOTL2Q9Y2J4 779 aa23.35■■□□□ 1.33
SAPCD1-209ENST00000425424 NCOA3Q9Y6Q9 1424 aa23.32■■□□□ 1.32
SAPCD1-209ENST00000425424 USP47Q96K76 1375 aa23.31■■□□□ 1.32
SAPCD1-209ENST00000425424 ROBO2Q9HCK4 1378 aa23.31■■□□□ 1.32
SAPCD1-209ENST00000425424 LTBP4Q8N2S1 1624 aa23.31■■□□□ 1.32
SAPCD1-209ENST00000425424 ZNF335Q9H4Z2 1342 aaPredicted RBP23.3■■□□□ 1.32
SAPCD1-209ENST00000425424 SBNO2Q9Y2G9 1366 aa23.28■■□□□ 1.32
SAPCD1-209ENST00000425424 TRAK1Q9UPV9 953 aa23.28■■□□□ 1.32
SAPCD1-209ENST00000425424 STK26Q9P289 416 aa23.27■■□□□ 1.32
SAPCD1-209ENST00000425424 ADGRB2O60241 1585 aa23.27■■□□□ 1.32
SAPCD1-209ENST00000425424 QRICH2Q9H0J4 1663 aa23.26■■□□□ 1.31
SAPCD1-209ENST00000425424 LRRC7Q96NW7 1537 aa23.26■■□□□ 1.31
SAPCD1-209ENST00000425424 EIF4G2P78344 907 aaKnown RBP eCLIP23.24■■□□□ 1.31
SAPCD1-209ENST00000425424 CENPJQ9HC77 1338 aaPredicted RBP23.24■■□□□ 1.31
SAPCD1-209ENST00000425424 PRAM1Q96QH2 718 aa23.23■■□□□ 1.31
SAPCD1-209ENST00000425424 PLEKHH1Q9ULM0 1364 aa23.22■■□□□ 1.31
SAPCD1-209ENST00000425424 ADGRL3Q9HAR2 1447 aa23.22■■□□□ 1.31
SAPCD1-209ENST00000425424 NALCNQ8IZF0 1738 aa23.22■■□□□ 1.31
SAPCD1-209ENST00000425424 SLC24A1O60721 1099 aa23.21■■□□□ 1.31
SAPCD1-209ENST00000425424 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.21■■□□□ 1.31
SAPCD1-209ENST00000425424 XIRP1Q702N8 1843 aaKnown RBP23.21■■□□□ 1.31
SAPCD1-209ENST00000425424 CDC42BPGQ6DT37 1551 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms