RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 TXNDC2Q86VQ3 553 aa32.1■■■□□ 2.73
HMGA2-205ENST00000425208 MED14O60244 1454 aa32.09■■■□□ 2.73
HMGA2-205ENST00000425208 LTKP29376 864 aa32.09■■■□□ 2.73
HMGA2-205ENST00000425208 HDGFP51858 240 aaKnown RBP32.08■■■□□ 2.73
HMGA2-205ENST00000425208 IQGAP1P46940 1657 aa32.07■■■□□ 2.72
HMGA2-205ENST00000425208 NPHP4O75161 1426 aaPredicted RBP32.06■■■□□ 2.72
HMGA2-205ENST00000425208 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.05■■■□□ 2.72
HMGA2-205ENST00000425208 SPATA31E1Q6ZUB1 1445 aa32.05■■■□□ 2.72
HMGA2-205ENST00000425208 NEXMIFQ5QGS0 1516 aa32.03■■■□□ 2.72
HMGA2-205ENST00000425208 PPP1R15AO75807 674 aaPredicted RBP32.03■■■□□ 2.72
HMGA2-205ENST00000425208 RPGRIP1LQ68CZ1 1315 aa31.99■■■□□ 2.71
HMGA2-205ENST00000425208 PPLO60437 1756 aa31.98■■■□□ 2.71
HMGA2-205ENST00000425208 RGL3Q3MIN7 710 aa31.98■■■□□ 2.71
HMGA2-205ENST00000425208 NUTM2DQ5VT03 806 aaPredicted RBP31.97■■■□□ 2.71
HMGA2-205ENST00000425208 PLEKHG1Q9ULL1 1385 aa31.97■■■□□ 2.71
HMGA2-205ENST00000425208 IFT172Q9UG01 1749 aa31.94■■■□□ 2.7
HMGA2-205ENST00000425208 BCANQ96GW7 911 aa31.92■■■□□ 2.7
HMGA2-205ENST00000425208 VGFO15240 615 aaPredicted RBP31.89■■■□□ 2.7
HMGA2-205ENST00000425208 SENP3Q9H4L4 574 aaPredicted RBP31.86■■■□□ 2.69
HMGA2-205ENST00000425208 SETBP1Q9Y6X0 1596 aa31.86■■■□□ 2.69
HMGA2-205ENST00000425208 DIP2AQ14689 1571 aa31.85■■■□□ 2.69
HMGA2-205ENST00000425208 NRXN3Q9Y4C0 1643 aa31.84■■■□□ 2.69
HMGA2-205ENST00000425208 SLC26A8Q96RN1 970 aa31.83■■■□□ 2.69
HMGA2-205ENST00000425208 SIN3AQ96ST3 1273 aa31.83■■■□□ 2.69
HMGA2-205ENST00000425208 MYOM2P54296 1465 aa31.82■■■□□ 2.68
HMGA2-205ENST00000425208 ADAMTS13Q76LX8 1427 aa31.81■■■□□ 2.68
HMGA2-205ENST00000425208 NEUROD1Q13562 356 aa31.79■■■□□ 2.68
HMGA2-205ENST00000425208 ZNF335Q9H4Z2 1342 aaPredicted RBP31.79■■■□□ 2.68
HMGA2-205ENST00000425208 ADGRF5Q8IZF2 1346 aa31.77■■■□□ 2.68
HMGA2-205ENST00000425208 TBX22Q9Y458 520 aa31.76■■■□□ 2.68
HMGA2-205ENST00000425208 DCAF11Q8TEB1 546 aa31.75■■■□□ 2.67
HMGA2-205ENST00000425208 PIK3C2GO75747 1445 aa31.74■■■□□ 2.67
HMGA2-205ENST00000425208 NRXN1Q9ULB1 1477 aa31.74■■■□□ 2.67
HMGA2-205ENST00000425208 STAC3Q96MF2 364 aa31.74■■■□□ 2.67
HMGA2-205ENST00000425208 CLSPNQ9HAW4 1339 aa31.74■■■□□ 2.67
HMGA2-205ENST00000425208 LTBP4Q8N2S1 1624 aa31.73■■■□□ 2.67
HMGA2-205ENST00000425208 SETD1AO15047 1707 aaKnown RBP31.71■■■□□ 2.67
HMGA2-205ENST00000425208 ALKQ9UM73 1620 aa31.71■■■□□ 2.67
HMGA2-205ENST00000425208 CCER1Q8TC90 406 aaPredicted RBP31.71■■■□□ 2.67
HMGA2-205ENST00000425208 KDM2AQ9Y2K7 1162 aa31.71■■■□□ 2.67
HMGA2-205ENST00000425208 STRCP1A6NGW2 1772 aa31.7■■■□□ 2.67
HMGA2-205ENST00000425208 PIK3R4Q99570 1358 aa31.7■■■□□ 2.67
HMGA2-205ENST00000425208 CPS1P31327 1500 aa31.7■■■□□ 2.66
HMGA2-205ENST00000425208 CHD2O14647 1828 aaKnown RBP31.69■■■□□ 2.66
HMGA2-205ENST00000425208 NWD1Q149M9 1564 aa31.68■■■□□ 2.66
HMGA2-205ENST00000425208 LAMC1P11047 1609 aa31.67■■■□□ 2.66
HMGA2-205ENST00000425208 KCNA6P17658 529 aa31.66■■■□□ 2.66
HMGA2-205ENST00000425208 L3MBTL2Q969R5 705 aa31.65■■■□□ 2.66
HMGA2-205ENST00000425208 TONSLQ96HA7 1378 aa31.64■■■□□ 2.66
HMGA2-205ENST00000425208 METP08581 1390 aa31.64■■■□□ 2.65
HMGA2-205ENST00000425208 NKTRP30414 1462 aaKnown RBP31.62■■■□□ 2.65
HMGA2-205ENST00000425208 XRN1Q8IZH2 1706 aaKnown RBP31.59■■■□□ 2.65
HMGA2-205ENST00000425208 PTPRUQ92729 1446 aa31.58■■■□□ 2.65
HMGA2-205ENST00000425208 C14orf93Q9H972 538 aaKnown RBP31.58■■■□□ 2.65
HMGA2-205ENST00000425208 PRAG1Q86YV5 1406 aa31.57■■■□□ 2.64
HMGA2-205ENST00000425208 CFAP70Q5T0N1 1121 aa31.56■■■□□ 2.64
HMGA2-205ENST00000425208 AMOTL2Q9Y2J4 779 aa31.56■■■□□ 2.64
HMGA2-205ENST00000425208 ASXL1Q8IXJ9 1541 aa31.55■■■□□ 2.64
HMGA2-205ENST00000425208 LRRC7Q96NW7 1537 aa31.55■■■□□ 2.64
HMGA2-205ENST00000425208 CERKQ8TCT0 537 aa31.55■■■□□ 2.64
HMGA2-205ENST00000425208 KIAA1210Q9ULL0 1709 aa31.53■■■□□ 2.64
HMGA2-205ENST00000425208 IQSEC2Q5JU85 1478 aa31.52■■■□□ 2.64
HMGA2-205ENST00000425208 TMEM132EQ6IEE7 984 aa31.49■■■□□ 2.63
HMGA2-205ENST00000425208 PROSER2Q86WR7 435 aaPredicted RBP31.49■■■□□ 2.63
HMGA2-205ENST00000425208 XIRP1Q702N8 1843 aaKnown RBP31.48■■■□□ 2.63
HMGA2-205ENST00000425208 ADGRB1O14514 1584 aa31.48■■■□□ 2.63
HMGA2-205ENST00000425208 KNDC1Q76NI1 1749 aa31.47■■■□□ 2.63
HMGA2-205ENST00000425208 PTCH1Q13635 1447 aa31.47■■■□□ 2.63
HMGA2-205ENST00000425208 YTHDC2Q9H6S0 1430 aaKnown RBP31.46■■■□□ 2.63
HMGA2-205ENST00000425208 LRPPRCP42704 1394 aaKnown RBP31.46■■■□□ 2.63
HMGA2-205ENST00000425208 TMEM94Q12767 1356 aa31.46■■■□□ 2.63
HMGA2-205ENST00000425208 TIMELESSQ9UNS1 1208 aa31.44■■■□□ 2.62
HMGA2-205ENST00000425208 TECPR2O15040 1411 aa31.43■■■□□ 2.62
HMGA2-205ENST00000425208 STK26Q9P289 416 aa31.42■■■□□ 2.62
HMGA2-205ENST00000425208 TRPM1Q7Z4N2 1603 aa31.42■■■□□ 2.62
HMGA2-205ENST00000425208 ABCC11Q96J66 1382 aa31.41■■■□□ 2.62
HMGA2-205ENST00000425208 RBM33Q96EV2 1170 aaKnown RBP31.41■■■□□ 2.62
HMGA2-205ENST00000425208 NCOA3Q9Y6Q9 1424 aa31.4■■■□□ 2.62
HMGA2-205ENST00000425208 ROBO2Q9HCK4 1378 aa31.39■■■□□ 2.62
HMGA2-205ENST00000425208 NBPF8Q3BBV2 869 aa31.35■■■□□ 2.61
HMGA2-205ENST00000425208 C14orf37Q86TY3 774 aa31.35■■■□□ 2.61
HMGA2-205ENST00000425208 DLC1Q96QB1 1528 aa31.34■■■□□ 2.61
HMGA2-205ENST00000425208 NBPF1Q3BBV0 1214 aa31.34■■■□□ 2.61
HMGA2-205ENST00000425208 MSH6P52701 1360 aa31.34■■■□□ 2.61
HMGA2-205ENST00000425208 ROCK2O75116 1388 aaKnown RBP31.32■■■□□ 2.6
HMGA2-205ENST00000425208 FAM135BQ49AJ0 1406 aa31.32■■■□□ 2.6
HMGA2-205ENST00000425208 TRAK1Q9UPV9 953 aa31.31■■■□□ 2.6
HMGA2-205ENST00000425208 NALCNQ8IZF0 1738 aa31.3■■■□□ 2.6
HMGA2-205ENST00000425208 RALGAPBQ86X10 1494 aa31.3■■■□□ 2.6
HMGA2-205ENST00000425208 SIRT1Q96EB6 747 aa31.3■■■□□ 2.6
HMGA2-205ENST00000425208 ARHGEF28Q8N1W1 1705 aaKnown RBP31.29■■■□□ 2.6
HMGA2-205ENST00000425208 ADGRL3Q9HAR2 1447 aa31.29■■■□□ 2.6
HMGA2-205ENST00000425208 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.27■■■□□ 2.6
HMGA2-205ENST00000425208 WAPLQ7Z5K2 1190 aa31.26■■■□□ 2.6
HMGA2-205ENST00000425208 C19orf44Q9H6X5 657 aa31.26■■■□□ 2.6
HMGA2-205ENST00000425208 PLEKHH1Q9ULM0 1364 aa31.25■■■□□ 2.59
HMGA2-205ENST00000425208 UBAP1LF5GYI3 381 aa31.25■■■□□ 2.59
HMGA2-205ENST00000425208 ILDR1Q86SU0 546 aaPredicted RBP31.25■■■□□ 2.59
HMGA2-205ENST00000425208 GPRASP1Q5JY77 1395 aa31.25■■■□□ 2.59
HMGA2-205ENST00000425208 TOM1O60784 492 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms