RNA–Protein interactions for RNA: ENST00000425174.1

HLA-S-202, Transcript of major histocompatibility complex, class I, S (pseudogene), humanhuman

BASIC

Gene HLA-S, Length 53 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-S-202ENST00000425174 TRIM42Q8IWZ5 723 aa-0.42□□□□□ -2.48
HLA-S-202ENST00000425174 WBP2Q969T9 261 aa-0.42□□□□□ -2.48
HLA-S-202ENST00000425174 VWCEQ96DN2 955 aa-0.42□□□□□ -2.48
HLA-S-202ENST00000425174 PPP1R10Q96QC0 940 aaKnown RBP-0.42□□□□□ -2.48
HLA-S-202ENST00000425174 SPAG8Q99932 426 aaPredicted RBP-0.42□□□□□ -2.48
HLA-S-202ENST00000425174 GAR1Q9NY12 217 aaKnown RBP-0.42□□□□□ -2.48
HLA-S-202ENST00000425174 PRR13Q9NZ81 148 aa-0.42□□□□□ -2.48
HLA-S-202ENST00000425174 CEP290O15078 2479 aa-0.42□□□□□ -2.48
HLA-S-202ENST00000425174 A0A0C4DFX4 3053 aa-0.42□□□□□ -2.48
HLA-S-202ENST00000425174 WNK1Q9H4A3 2382 aa-0.42□□□□□ -2.48
HLA-S-202ENST00000425174 CELSR1Q9NYQ6 3014 aa-0.43□□□□□ -2.48
HLA-S-202ENST00000425174 HNRNPA3P51991 378 aaKnown RBP-0.43□□□□□ -2.48
HLA-S-202ENST00000425174 KRTAP10-10P60014 251 aa-0.43□□□□□ -2.48
HLA-S-202ENST00000425174 MEGF10Q96KG7 1140 aa-0.43□□□□□ -2.48
HLA-S-202ENST00000425174 ZNF282Q9UDV7 671 aaPredicted RBP-0.43□□□□□ -2.48
HLA-S-202ENST00000425174 VPS9D1Q9Y2B5 631 aa-0.43□□□□□ -2.48
HLA-S-202ENST00000425174 CACNA1BQ00975 2339 aa-0.43□□□□□ -2.48
HLA-S-202ENST00000425174 ZDBF2Q9HCK1 2354 aa-0.43□□□□□ -2.48
HLA-S-202ENST00000425174 RTTNQ86VV8 2226 aa-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 NBEAQ8NFP9 2946 aa-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 URB1O60287 2271 aaKnown RBP-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 MAP1AP78559 2803 aaPredicted RBP-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 SRCAPQ6ZRS2 3230 aa-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 CYSRT1A8MQ03 144 aa-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 IGHA2P01877 340 aa-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 HNRNPA1P09651 372 aaKnown RBP eCLIP-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 TXKP42681 527 aa-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 KRTAP19-8Q3LI54 63 aa-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 ZNF764Q96H86 408 aaPredicted RBP-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 KCNK12Q9HB15 430 aa-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 JAG2Q9Y219 1238 aa-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 DNAH7Q8WXX0 4024 aa-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 CUBNO60494 3623 aa-0.44□□□□□ -2.48
HLA-S-202ENST00000425174 GVINP1Q7Z2Y8 2422 aa-0.45□□□□□ -2.48
HLA-S-202ENST00000425174 FLGP20930 4061 aaPredicted RBP-0.45□□□□□ -2.48
HLA-S-202ENST00000425174 PRKDCP78527 4128 aaKnown RBP-0.45□□□□□ -2.48
HLA-S-202ENST00000425174 CFAP46Q8IYW2 2715 aa-0.45□□□□□ -2.48
HLA-S-202ENST00000425174 YBX3P16989 372 aaKnown RBP eCLIP-0.45□□□□□ -2.48
HLA-S-202ENST00000425174 PEAR1Q5VY43 1037 aaPredicted RBP-0.45□□□□□ -2.48
HLA-S-202ENST00000425174 KRT35Q92764 455 aa-0.45□□□□□ -2.48
HLA-S-202ENST00000425174 NELL2Q99435 816 aa-0.45□□□□□ -2.48
HLA-S-202ENST00000425174 CDCA7Q9BWT1 371 aaPredicted RBP-0.45□□□□□ -2.48
HLA-S-202ENST00000425174 CSRNP2Q9H175 543 aa-0.45□□□□□ -2.48
HLA-S-202ENST00000425174 UNKLQ9H9P5 680 aaKnown RBP-0.45□□□□□ -2.48
HLA-S-202ENST00000425174 RGS17Q9UGC6 210 aaPredicted RBP-0.45□□□□□ -2.48
HLA-S-202ENST00000425174 POLEQ07864 2286 aa-0.45□□□□□ -2.48
HLA-S-202ENST00000425174 AGRNO00468 2067 aa-0.45□□□□□ -2.48
HLA-S-202ENST00000425174 NBPF19A0A087WUL8 3843 aa-0.46□□□□□ -2.48
HLA-S-202ENST00000425174 SOX1O00570 391 aaPredicted RBP-0.46□□□□□ -2.48
HLA-S-202ENST00000425174 PRB4P10163 310 aaPredicted RBP-0.46□□□□□ -2.48
HLA-S-202ENST00000425174 ARP10275 920 aa-0.46□□□□□ -2.48
HLA-S-202ENST00000425174 KRT2P35908 639 aa-0.46□□□□□ -2.48
HLA-S-202ENST00000425174 SSBP2P81877 361 aaPredicted RBP-0.46□□□□□ -2.48
HLA-S-202ENST00000425174 COL10A1Q03692 680 aa-0.46□□□□□ -2.48
HLA-S-202ENST00000425174 XKR4Q5GH76 650 aa-0.46□□□□□ -2.48
HLA-S-202ENST00000425174 NAA40Q86UY6 237 aa-0.46□□□□□ -2.48
HLA-S-202ENST00000425174 NTN4Q9HB63 628 aa-0.46□□□□□ -2.48
HLA-S-202ENST00000425174 SCRT2Q9NQ03 307 aa-0.46□□□□□ -2.48
HLA-S-202ENST00000425174 STK17AQ9UEE5 414 aa-0.46□□□□□ -2.48
HLA-S-202ENST00000425174 PTPRQQ9UMZ3 2332 aa-0.46□□□□□ -2.48
HLA-S-202ENST00000425174 MXRA5Q9NR99 2828 aa-0.46□□□□□ -2.48
HLA-S-202ENST00000425174 MUC4Q99102 2169 aa-0.47□□□□□ -2.48
HLA-S-202ENST00000425174 OVOL3O00110 214 aa-0.47□□□□□ -2.48
HLA-S-202ENST00000425174 LCE2BO14633 110 aa-0.47□□□□□ -2.48
HLA-S-202ENST00000425174 ONECUT3O60422 494 aaPredicted RBP-0.47□□□□□ -2.48
HLA-S-202ENST00000425174 ATXN1P54253 815 aaKnown RBP-0.47□□□□□ -2.48
HLA-S-202ENST00000425174 C11orf87Q6NUJ2 197 aa-0.47□□□□□ -2.48
HLA-S-202ENST00000425174 CDAN1Q8IWY9 1227 aa-0.47□□□□□ -2.48
HLA-S-202ENST00000425174 Q8N3U1 123 aa-0.47□□□□□ -2.48
HLA-S-202ENST00000425174 TNFRSF18Q9Y5U5 241 aa-0.47□□□□□ -2.48
HLA-S-202ENST00000425174 DNAH1Q9P2D7 4330 aa-0.47□□□□□ -2.48
HLA-S-202ENST00000425174 CNOT1A5YKK6 2376 aaKnown RBP-0.47□□□□□ -2.49
HLA-S-202ENST00000425174 FREM1Q5H8C1 2179 aa-0.47□□□□□ -2.49
HLA-S-202ENST00000425174 NOTCH4Q99466 2003 aa-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 HNRNPA2B1P22626 353 aaKnown RBP-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 PI4KAP42356 2102 aa-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 DHX9Q08211 1270 aaKnown RBP-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 NFATC3Q12968 1075 aa-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 KRTAP19-6Q3LI70 58 aa-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 DMRTA1Q5VZB9 504 aa-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 BHLHA9Q7RTU4 235 aa-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 KRTAP19-3Q7Z4W3 81 aa-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 SPNS2Q8IVW8 549 aa-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 TRPM4Q8TD43 1214 aa-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 STAG1Q8WVM7 1258 aa-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 EMID1Q96A84 441 aaPredicted RBP-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 TSG101Q99816 390 aa-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 PDE4DIPQ5VU43 2346 aa-0.48□□□□□ -2.49
HLA-S-202ENST00000425174 MYCBP2O75592 4640 aa-0.49□□□□□ -2.49
HLA-S-202ENST00000425174 COL22A1Q8NFW1 1626 aaPredicted RBP-0.49□□□□□ -2.49
HLA-S-202ENST00000425174 SUV39H1O43463 412 aa-0.49□□□□□ -2.49
HLA-S-202ENST00000425174 UBXN11Q5T124 520 aa-0.49□□□□□ -2.49
HLA-S-202ENST00000425174 Q7L0L9 218 aa-0.49□□□□□ -2.49
HLA-S-202ENST00000425174 COL23A1Q86Y22 540 aaPredicted RBP-0.49□□□□□ -2.49
HLA-S-202ENST00000425174 TYMSOSQ8TAI1 123 aa-0.49□□□□□ -2.49
HLA-S-202ENST00000425174 CSRNP1Q96S65 589 aa-0.49□□□□□ -2.49
HLA-S-202ENST00000425174 PHOX2BQ99453 314 aa-0.49□□□□□ -2.49
HLA-S-202ENST00000425174 HNRNPABQ99729 332 aaKnown RBP-0.49□□□□□ -2.49
HLA-S-202ENST00000425174 METTL14Q9HCE5 456 aaKnown RBP-0.49□□□□□ -2.49
HLA-S-202ENST00000425174 EMILIN3Q9NT22 766 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms