RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 MSH6P52701 1360 aa24.41■■□□□ 1.5
RPUSD3-204ENST00000424438 LOC105371045A0A1W2PR82 267 aa24.4■■□□□ 1.5
RPUSD3-204ENST00000424438 SLC26A8Q96RN1 970 aa24.39■■□□□ 1.49
RPUSD3-204ENST00000424438 PLEKHG1Q9ULL1 1385 aa24.39■■□□□ 1.49
RPUSD3-204ENST00000424438 APLP2Q06481 763 aa24.38■■□□□ 1.49
RPUSD3-204ENST00000424438 SETD1AO15047 1707 aaKnown RBP24.35■■□□□ 1.49
RPUSD3-204ENST00000424438 PHLPP1O60346 1717 aa24.35■■□□□ 1.49
RPUSD3-204ENST00000424438 JCADQ9P266 1359 aa24.35■■□□□ 1.49
RPUSD3-204ENST00000424438 HDGFP51858 240 aaKnown RBP24.35■■□□□ 1.49
RPUSD3-204ENST00000424438 SLAIN2Q9P270 581 aa24.34■■□□□ 1.49
RPUSD3-204ENST00000424438 MYO5BQ9ULV0 1848 aa24.33■■□□□ 1.49
RPUSD3-204ENST00000424438 TMEM131LA2VDJ0 1609 aa24.33■■□□□ 1.49
RPUSD3-204ENST00000424438 UPF1Q92900 1129 aaKnown RBP eCLIP24.33■■□□□ 1.49
RPUSD3-204ENST00000424438 ANKRD50Q9ULJ7 1429 aa24.33■■□□□ 1.49
RPUSD3-204ENST00000424438 GCC2Q8IWJ2 1684 aa24.33■■□□□ 1.49
RPUSD3-204ENST00000424438 DIP2AQ14689 1571 aa24.31■■□□□ 1.48
RPUSD3-204ENST00000424438 CHIC2Q9UKJ5 165 aa24.31■■□□□ 1.48
RPUSD3-204ENST00000424438 TBX22Q9Y458 520 aa24.31■■□□□ 1.48
RPUSD3-204ENST00000424438 COL16A1Q07092 1604 aaPredicted RBP24.31■■□□□ 1.48
RPUSD3-204ENST00000424438 RIMS2Q9UQ26 1411 aa24.3■■□□□ 1.48
RPUSD3-204ENST00000424438 MEX3CQ5U5Q3 659 aaKnown RBP24.3■■□□□ 1.48
RPUSD3-204ENST00000424438 ZNF772Q68DY9 489 aaPredicted RBP24.3■■□□□ 1.48
RPUSD3-204ENST00000424438 PIK3R4Q99570 1358 aa24.29■■□□□ 1.48
RPUSD3-204ENST00000424438 RBM33Q96EV2 1170 aaKnown RBP24.29■■□□□ 1.48
RPUSD3-204ENST00000424438 TRIM52Q96A61 297 aa24.28■■□□□ 1.48
RPUSD3-204ENST00000424438 UNC13BO14795 1591 aa24.28■■□□□ 1.48
RPUSD3-204ENST00000424438 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.27■■□□□ 1.48
RPUSD3-204ENST00000424438 AHDC1Q5TGY3 1603 aaPredicted RBP24.26■■□□□ 1.47
RPUSD3-204ENST00000424438 SPATA31A6Q5VVP1 1343 aa24.25■■□□□ 1.47
RPUSD3-204ENST00000424438 BCANQ96GW7 911 aa24.23■■□□□ 1.47
RPUSD3-204ENST00000424438 ADAMTS13Q76LX8 1427 aa24.23■■□□□ 1.47
RPUSD3-204ENST00000424438 SHPRHQ149N8 1683 aa24.22■■□□□ 1.47
RPUSD3-204ENST00000424438 PPP1R15AO75807 674 aaPredicted RBP24.21■■□□□ 1.47
RPUSD3-204ENST00000424438 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.21■■□□□ 1.47
RPUSD3-204ENST00000424438 CADPS2Q86UW7 1296 aa24.2■■□□□ 1.46
RPUSD3-204ENST00000424438 E9PCH4 1651 aa24.2■■□□□ 1.46
RPUSD3-204ENST00000424438 C19orf44Q9H6X5 657 aa24.19■■□□□ 1.46
RPUSD3-204ENST00000424438 IQGAP3Q86VI3 1631 aa24.18■■□□□ 1.46
RPUSD3-204ENST00000424438 RXRBP28702 533 aa24.18■■□□□ 1.46
RPUSD3-204ENST00000424438 DCCP43146 1447 aa24.18■■□□□ 1.46
RPUSD3-204ENST00000424438 LRP6O75581 1613 aa24.17■■□□□ 1.46
RPUSD3-204ENST00000424438 ROCK1Q13464 1354 aa24.16■■□□□ 1.46
RPUSD3-204ENST00000424438 TRPM2O94759 1503 aa24.16■■□□□ 1.46
RPUSD3-204ENST00000424438 C14orf37Q86TY3 774 aa24.13■■□□□ 1.45
RPUSD3-204ENST00000424438 FAM50AQ14320 339 aaKnown RBP24.12■■□□□ 1.45
RPUSD3-204ENST00000424438 ATF3P18847 181 aa24.11■■□□□ 1.45
RPUSD3-204ENST00000424438 CDK12Q9NYV4 1490 aaPredicted RBP24.11■■□□□ 1.45
RPUSD3-204ENST00000424438 XRN1Q8IZH2 1706 aaKnown RBP24.1■■□□□ 1.45
RPUSD3-204ENST00000424438 SETBP1Q9Y6X0 1596 aa24.08■■□□□ 1.45
RPUSD3-204ENST00000424438 PTPRUQ92729 1446 aa24.06■■□□□ 1.44
RPUSD3-204ENST00000424438 SETD5Q9C0A6 1442 aa24.06■■□□□ 1.44
RPUSD3-204ENST00000424438 BRINP3Q76B58 766 aa24.05■■□□□ 1.44
RPUSD3-204ENST00000424438 AMOTL2Q9Y2J4 779 aa24.05■■□□□ 1.44
RPUSD3-204ENST00000424438 NHSL1Q5SYE7 1610 aa24.05■■□□□ 1.44
RPUSD3-204ENST00000424438 NRXN3Q9Y4C0 1643 aa24.05■■□□□ 1.44
RPUSD3-204ENST00000424438 SRCAPQ6ZRS2 3230 aa24.05■■□□□ 1.44
RPUSD3-204ENST00000424438 NUTM2BA6NNL0 878 aaPredicted RBP24.04■■□□□ 1.44
RPUSD3-204ENST00000424438 NUTM2EB1AL46 878 aaPredicted RBP24.04■■□□□ 1.44
RPUSD3-204ENST00000424438 CHGAP10645 457 aaKnown RBP24.04■■□□□ 1.44
RPUSD3-204ENST00000424438 NUTM2AQ8IVF1 878 aaPredicted RBP24.04■■□□□ 1.44
RPUSD3-204ENST00000424438 ASXL1Q8IXJ9 1541 aa24.03■■□□□ 1.44
RPUSD3-204ENST00000424438 MST1RQ04912 1400 aa24.01■■□□□ 1.43
RPUSD3-204ENST00000424438 FOXD1Q16676 465 aa24■■□□□ 1.43
RPUSD3-204ENST00000424438 SPHKAPQ2M3C7 1700 aa24■■□□□ 1.43
RPUSD3-204ENST00000424438 AFF2P51816 1311 aa24■■□□□ 1.43
RPUSD3-204ENST00000424438 NUP155O75694 1391 aa24■■□□□ 1.43
RPUSD3-204ENST00000424438 NUTM2DQ5VT03 806 aaPredicted RBP23.97■■□□□ 1.43
RPUSD3-204ENST00000424438 ADGRL3Q9HAR2 1447 aa23.95■■□□□ 1.42
RPUSD3-204ENST00000424438 LAMC1P11047 1609 aa23.95■■□□□ 1.42
RPUSD3-204ENST00000424438 LRRC59Q96AG4 307 aaKnown RBP23.94■■□□□ 1.42
RPUSD3-204ENST00000424438 RBM6P78332 1123 aaKnown RBP23.93■■□□□ 1.42
RPUSD3-204ENST00000424438 QTRT2Q9H974 415 aaKnown RBP23.91■■□□□ 1.42
RPUSD3-204ENST00000424438 C8orf37Q96NL8 207 aa23.9■■□□□ 1.42
RPUSD3-204ENST00000424438 RGS12O14924 1447 aa23.9■■□□□ 1.42
RPUSD3-204ENST00000424438 PRAG1Q86YV5 1406 aa23.9■■□□□ 1.42
RPUSD3-204ENST00000424438 NALCNQ8IZF0 1738 aa23.9■■□□□ 1.42
RPUSD3-204ENST00000424438 METP08581 1390 aa23.9■■□□□ 1.42
RPUSD3-204ENST00000424438 ZRANB1Q9UGI0 708 aa23.89■■□□□ 1.41
RPUSD3-204ENST00000424438 PNPLA6Q8IY17 1366 aa23.89■■□□□ 1.41
RPUSD3-204ENST00000424438 NEXMIFQ5QGS0 1516 aa23.89■■□□□ 1.41
RPUSD3-204ENST00000424438 NGLY1Q96IV0 654 aa23.88■■□□□ 1.41
RPUSD3-204ENST00000424438 PTCH1Q13635 1447 aa23.86■■□□□ 1.41
RPUSD3-204ENST00000424438 ATAD2Q6PL18 1390 aa23.86■■□□□ 1.41
RPUSD3-204ENST00000424438 KIF1BO60333 1816 aa23.84■■□□□ 1.41
RPUSD3-204ENST00000424438 CLTCL1P53675 1640 aa23.84■■□□□ 1.41
RPUSD3-204ENST00000424438 C1orf167Q5SNV9 1468 aa23.82■■□□□ 1.4
RPUSD3-204ENST00000424438 ZNF326Q5BKZ1 582 aaKnown RBP23.81■■□□□ 1.4
RPUSD3-204ENST00000424438 SOS2Q07890 1332 aaPredicted RBP23.79■■□□□ 1.4
RPUSD3-204ENST00000424438 COL22A1Q8NFW1 1626 aaPredicted RBP23.77■■□□□ 1.4
RPUSD3-204ENST00000424438 ADAMTS2O95450 1211 aa23.75■■□□□ 1.39
RPUSD3-204ENST00000424438 VGFO15240 615 aaPredicted RBP23.74■■□□□ 1.39
RPUSD3-204ENST00000424438 HFM1A2PYH4 1435 aa23.74■■□□□ 1.39
RPUSD3-204ENST00000424438 RPGRIP1LQ68CZ1 1315 aa23.73■■□□□ 1.39
RPUSD3-204ENST00000424438 DDX17Q92841 729 aaKnown RBP23.72■■□□□ 1.39
RPUSD3-204ENST00000424438 ROBO2Q9HCK4 1378 aa23.71■■□□□ 1.39
RPUSD3-204ENST00000424438 FNBP4Q8N3X1 1017 aaPredicted RBP23.71■■□□□ 1.39
RPUSD3-204ENST00000424438 USP21Q9UK80 565 aa23.71■■□□□ 1.39
RPUSD3-204ENST00000424438 TRPC5Q9UL62 973 aaPredicted RBP23.71■■□□□ 1.39
RPUSD3-204ENST00000424438 CCDC125Q86Z20 511 aa23.69■■□□□ 1.38
RPUSD3-204ENST00000424438 CDC42BPGQ6DT37 1551 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms