RNA–Protein interactions for RNA: ENST00000424263.6

PRDM11-201, Transcript of PR/SET domain 11, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PRDM11, Length 1,858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11-201ENST00000424263 ZEB1P37275 1124 aaPredicted RBP28.9■■■□□ 2.22
PRDM11-201ENST00000424263 RGL3Q3MIN7 710 aa28.9■■■□□ 2.22
PRDM11-201ENST00000424263 ZNF326Q5BKZ1 582 aaKnown RBP28.89■■■□□ 2.22
PRDM11-201ENST00000424263 STRCQ7RTU9 1775 aa28.89■■■□□ 2.22
PRDM11-201ENST00000424263 HSPA2P54652 639 aa28.87■■■□□ 2.21
PRDM11-201ENST00000424263 RPGRIP1LQ68CZ1 1315 aa28.87■■■□□ 2.21
PRDM11-201ENST00000424263 SCAF11Q99590 1463 aaKnown RBP28.87■■■□□ 2.21
PRDM11-201ENST00000424263 MYOM2P54296 1465 aa28.86■■■□□ 2.21
PRDM11-201ENST00000424263 TONSLQ96HA7 1378 aa28.83■■■□□ 2.21
PRDM11-201ENST00000424263 IQGAP1P46940 1657 aa28.81■■■□□ 2.2
PRDM11-201ENST00000424263 NRXN1Q9ULB1 1477 aa28.81■■■□□ 2.2
PRDM11-201ENST00000424263 NRXN3Q9Y4C0 1643 aa28.81■■■□□ 2.2
PRDM11-201ENST00000424263 LTKP29376 864 aa28.8■■■□□ 2.2
PRDM11-201ENST00000424263 L3MBTL2Q969R5 705 aa28.8■■■□□ 2.2
PRDM11-201ENST00000424263 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.79■■■□□ 2.2
PRDM11-201ENST00000424263 MED14O60244 1454 aa28.79■■■□□ 2.2
PRDM11-201ENST00000424263 NUTM2DQ5VT03 806 aaPredicted RBP28.78■■■□□ 2.2
PRDM11-201ENST00000424263 TXNDC2Q86VQ3 553 aa28.78■■■□□ 2.2
PRDM11-201ENST00000424263 EID1Q9Y6B2 187 aa28.78■■■□□ 2.2
PRDM11-201ENST00000424263 SETBP1Q9Y6X0 1596 aa28.77■■■□□ 2.2
PRDM11-201ENST00000424263 ANKLE2Q86XL3 938 aa28.77■■■□□ 2.2
PRDM11-201ENST00000424263 DCAF11Q8TEB1 546 aa28.76■■■□□ 2.2
PRDM11-201ENST00000424263 HDGFP51858 240 aaKnown RBP28.76■■■□□ 2.19
PRDM11-201ENST00000424263 SETD1AO15047 1707 aaKnown RBP28.75■■■□□ 2.19
PRDM11-201ENST00000424263 PLEKHG1Q9ULL1 1385 aa28.75■■■□□ 2.19
PRDM11-201ENST00000424263 TIMELESSQ9UNS1 1208 aa28.74■■■□□ 2.19
PRDM11-201ENST00000424263 PIK3C2GO75747 1445 aa28.74■■■□□ 2.19
PRDM11-201ENST00000424263 VGFO15240 615 aaPredicted RBP28.74■■■□□ 2.19
PRDM11-201ENST00000424263 ADGRF5Q8IZF2 1346 aa28.73■■■□□ 2.19
PRDM11-201ENST00000424263 PPP1R15AO75807 674 aaPredicted RBP28.73■■■□□ 2.19
PRDM11-201ENST00000424263 LAMC1P11047 1609 aa28.73■■■□□ 2.19
PRDM11-201ENST00000424263 NCKAP5LQ9HCH0 1330 aa28.73■■■□□ 2.19
PRDM11-201ENST00000424263 STAC3Q96MF2 364 aa28.72■■■□□ 2.19
PRDM11-201ENST00000424263 NPHP4O75161 1426 aaPredicted RBP28.72■■■□□ 2.19
PRDM11-201ENST00000424263 PRAG1Q86YV5 1406 aa28.71■■■□□ 2.19
PRDM11-201ENST00000424263 KDM2AQ9Y2K7 1162 aa28.7■■■□□ 2.19
PRDM11-201ENST00000424263 KIAA1210Q9ULL0 1709 aa28.7■■■□□ 2.18
PRDM11-201ENST00000424263 DIP2AQ14689 1571 aa28.7■■■□□ 2.18
PRDM11-201ENST00000424263 ADAMTS13Q76LX8 1427 aa28.67■■■□□ 2.18
PRDM11-201ENST00000424263 TRPM1Q7Z4N2 1603 aa28.67■■■□□ 2.18
PRDM11-201ENST00000424263 ALKQ9UM73 1620 aa28.67■■■□□ 2.18
PRDM11-201ENST00000424263 SENP3Q9H4L4 574 aaPredicted RBP28.61■■■□□ 2.17
PRDM11-201ENST00000424263 ASXL1Q8IXJ9 1541 aa28.61■■■□□ 2.17
PRDM11-201ENST00000424263 NBPF8Q3BBV2 869 aa28.57■■■□□ 2.16
PRDM11-201ENST00000424263 CHD2O14647 1828 aaKnown RBP28.57■■■□□ 2.16
PRDM11-201ENST00000424263 ADGRB1O14514 1584 aa28.56■■■□□ 2.16
PRDM11-201ENST00000424263 BCANQ96GW7 911 aa28.56■■■□□ 2.16
PRDM11-201ENST00000424263 RALGAPBQ86X10 1494 aa28.56■■■□□ 2.16
PRDM11-201ENST00000424263 C14orf93Q9H972 538 aaKnown RBP28.55■■■□□ 2.16
PRDM11-201ENST00000424263 SLC26A8Q96RN1 970 aa28.55■■■□□ 2.16
PRDM11-201ENST00000424263 CFAP70Q5T0N1 1121 aa28.53■■■□□ 2.16
PRDM11-201ENST00000424263 TBX22Q9Y458 520 aa28.53■■■□□ 2.16
PRDM11-201ENST00000424263 DMRT2Q9Y5R5 561 aa28.52■■■□□ 2.16
PRDM11-201ENST00000424263 XRN1Q8IZH2 1706 aaKnown RBP28.52■■■□□ 2.16
PRDM11-201ENST00000424263 NWD1Q149M9 1564 aa28.51■■■□□ 2.16
PRDM11-201ENST00000424263 METP08581 1390 aa28.51■■■□□ 2.16
PRDM11-201ENST00000424263 KNDC1Q76NI1 1749 aa28.51■■■□□ 2.16
PRDM11-201ENST00000424263 STRCP1A6NGW2 1772 aa28.51■■■□□ 2.15
PRDM11-201ENST00000424263 PIK3R4Q99570 1358 aa28.49■■■□□ 2.15
PRDM11-201ENST00000424263 PTPRUQ92729 1446 aa28.46■■■□□ 2.15
PRDM11-201ENST00000424263 GPRASP1Q5JY77 1395 aa28.46■■■□□ 2.15
PRDM11-201ENST00000424263 NBPF1Q3BBV0 1214 aa28.44■■■□□ 2.14
PRDM11-201ENST00000424263 ROCK2O75116 1388 aaKnown RBP28.44■■■□□ 2.14
PRDM11-201ENST00000424263 ARHGEF28Q8N1W1 1705 aaKnown RBP28.43■■■□□ 2.14
PRDM11-201ENST00000424263 YTHDC2Q9H6S0 1430 aaKnown RBP28.43■■■□□ 2.14
PRDM11-201ENST00000424263 TMEM132EQ6IEE7 984 aa28.42■■■□□ 2.14
PRDM11-201ENST00000424263 CPS1P31327 1500 aa28.42■■■□□ 2.14
PRDM11-201ENST00000424263 LRPPRCP42704 1394 aaKnown RBP28.4■■■□□ 2.14
PRDM11-201ENST00000424263 TECPR2O15040 1411 aa28.4■■■□□ 2.14
PRDM11-201ENST00000424263 NKTRP30414 1462 aaKnown RBP28.38■■■□□ 2.13
PRDM11-201ENST00000424263 DLC1Q96QB1 1528 aa28.38■■■□□ 2.13
PRDM11-201ENST00000424263 PTCH1Q13635 1447 aa28.36■■■□□ 2.13
PRDM11-201ENST00000424263 ZNF335Q9H4Z2 1342 aaPredicted RBP28.35■■■□□ 2.13
PRDM11-201ENST00000424263 ABCC11Q96J66 1382 aa28.35■■■□□ 2.13
PRDM11-201ENST00000424263 KCNA6P17658 529 aa28.35■■■□□ 2.13
PRDM11-201ENST00000424263 AMOTL2Q9Y2J4 779 aa28.34■■■□□ 2.13
PRDM11-201ENST00000424263 LTBP4Q8N2S1 1624 aa28.33■■■□□ 2.13
PRDM11-201ENST00000424263 XIRP1Q702N8 1843 aaKnown RBP28.33■■■□□ 2.13
PRDM11-201ENST00000424263 CARD11Q9BXL7 1154 aa28.32■■■□□ 2.12
PRDM11-201ENST00000424263 STK26Q9P289 416 aa28.3■■■□□ 2.12
PRDM11-201ENST00000424263 ROBO2Q9HCK4 1378 aa28.3■■■□□ 2.12
PRDM11-201ENST00000424263 FAM135BQ49AJ0 1406 aa28.28■■■□□ 2.12
PRDM11-201ENST00000424263 QRICH2Q9H0J4 1663 aa28.28■■■□□ 2.12
PRDM11-201ENST00000424263 TRAK1Q9UPV9 953 aa28.27■■■□□ 2.12
PRDM11-201ENST00000424263 NALCNQ8IZF0 1738 aa28.25■■■□□ 2.11
PRDM11-201ENST00000424263 LRRC7Q96NW7 1537 aa28.24■■■□□ 2.11
PRDM11-201ENST00000424263 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.24■■■□□ 2.11
PRDM11-201ENST00000424263 USP47Q96K76 1375 aa28.24■■■□□ 2.11
PRDM11-201ENST00000424263 EIF3AQ14152 1382 aaKnown RBP28.23■■■□□ 2.11
PRDM11-201ENST00000424263 SIRT1Q96EB6 747 aa28.23■■■□□ 2.11
PRDM11-201ENST00000424263 PLEKHH1Q9ULM0 1364 aa28.22■■■□□ 2.11
PRDM11-201ENST00000424263 PRAM1Q96QH2 718 aa28.19■■■□□ 2.1
PRDM11-201ENST00000424263 ADGRB2O60241 1585 aa28.18■■■□□ 2.1
PRDM11-201ENST00000424263 WAPLQ7Z5K2 1190 aa28.17■■■□□ 2.1
PRDM11-201ENST00000424263 TMEM94Q12767 1356 aa28.17■■■□□ 2.1
PRDM11-201ENST00000424263 PROSER2Q86WR7 435 aaPredicted RBP28.16■■■□□ 2.1
PRDM11-201ENST00000424263 NCOA3Q9Y6Q9 1424 aa28.16■■■□□ 2.1
PRDM11-201ENST00000424263 CENPJQ9HC77 1338 aaPredicted RBP28.15■■■□□ 2.1
PRDM11-201ENST00000424263 ADGRL3Q9HAR2 1447 aa28.14■■■□□ 2.1
PRDM11-201ENST00000424263 POGKQ9P215 609 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms