RNA–Protein interactions for RNA: ENST00000423572.6

SCN5A-205, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN5A, Length 8,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-205ENST00000423572 TRIM21P19474 475 aaKnown RBP13.57□□□□□ -0.24
SCN5A-205ENST00000423572 HNRNPMP52272 730 aaKnown RBP eCLIP13.57□□□□□ -0.24
SCN5A-205ENST00000423572 RWDD1Q9H446 243 aaPredicted RBP13.57□□□□□ -0.24
SCN5A-205ENST00000423572 CARMIL1Q5VZK9 1371 aa13.57□□□□□ -0.24
SCN5A-205ENST00000423572 MCTP1Q6DN14 999 aa13.56□□□□□ -0.24
SCN5A-205ENST00000423572 IPO7O95373 1038 aaKnown RBP13.56□□□□□ -0.24
SCN5A-205ENST00000423572 RBM42Q9BTD8 480 aaKnown RBP13.56□□□□□ -0.24
SCN5A-205ENST00000423572 CPLX1O14810 134 aa13.56□□□□□ -0.24
SCN5A-205ENST00000423572 SLC3A2P08195 630 aaKnown RBP13.56□□□□□ -0.24
SCN5A-205ENST00000423572 TIMELESSQ9UNS1 1208 aa13.56□□□□□ -0.24
SCN5A-205ENST00000423572 GRM1Q13255 1194 aa13.56□□□□□ -0.24
SCN5A-205ENST00000423572 ARHGAP35Q9NRY4 1499 aa13.55□□□□□ -0.24
SCN5A-205ENST00000423572 RILPL2Q969X0 211 aa13.55□□□□□ -0.24
SCN5A-205ENST00000423572 HOOK1Q9UJC3 728 aaKnown RBP13.55□□□□□ -0.24
SCN5A-205ENST00000423572 GBP4Q96PP9 640 aa13.54□□□□□ -0.24
SCN5A-205ENST00000423572 SOGA1O94964 1423 aa13.54□□□□□ -0.24
SCN5A-205ENST00000423572 BRMS1Q9HCU9 246 aa13.54□□□□□ -0.24
SCN5A-205ENST00000423572 RSPH4AQ5TD94 716 aa13.54□□□□□ -0.24
SCN5A-205ENST00000423572 EVC2Q86UK5 1308 aa13.53□□□□□ -0.24
SCN5A-205ENST00000423572 ESCO1Q5FWF5 840 aa13.53□□□□□ -0.24
SCN5A-205ENST00000423572 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
SCN5A-205ENST00000423572 CHMP4BP1P59074 171 aa13.53□□□□□ -0.24
SCN5A-205ENST00000423572 DIAPH3Q9NSV4 1193 aa13.53□□□□□ -0.24
SCN5A-205ENST00000423572 RIC3Q7Z5B4 369 aa13.52□□□□□ -0.24
SCN5A-205ENST00000423572 NECTIN2Q92692 538 aa13.52□□□□□ -0.24
SCN5A-205ENST00000423572 ZNF710Q8N1W2 664 aa13.52□□□□□ -0.25
SCN5A-205ENST00000423572 SMG6Q86US8 1419 aaKnown RBP13.52□□□□□ -0.25
SCN5A-205ENST00000423572 IFIT2P09913 472 aaKnown RBP13.51□□□□□ -0.25
SCN5A-205ENST00000423572 HSP90AB2PQ58FF8 381 aa13.51□□□□□ -0.25
SCN5A-205ENST00000423572 ZSCAN29Q8IWY8 852 aaPredicted RBP13.51□□□□□ -0.25
SCN5A-205ENST00000423572 MINK1Q8N4C8 1332 aaPredicted RBP13.51□□□□□ -0.25
SCN5A-205ENST00000423572 G3BP1Q13283 466 aaKnown RBP eCLIP13.51□□□□□ -0.25
SCN5A-205ENST00000423572 SLKQ9H2G2 1235 aaPredicted RBP13.51□□□□□ -0.25
SCN5A-205ENST00000423572 GNL3LQ9NVN8 582 aaKnown RBP13.51□□□□□ -0.25
SCN5A-205ENST00000423572 SUPT16HQ9Y5B9 1047 aaKnown RBP13.51□□□□□ -0.25
SCN5A-205ENST00000423572 TMOD2Q9NZR1 351 aa13.5□□□□□ -0.25
SCN5A-205ENST00000423572 CA8P35219 290 aa13.5□□□□□ -0.25
SCN5A-205ENST00000423572 SAFBQ15424 915 aaKnown RBP eCLIP13.5□□□□□ -0.25
SCN5A-205ENST00000423572 TOM1L2Q6ZVM7 507 aa13.5□□□□□ -0.25
SCN5A-205ENST00000423572 PHF14O94880 888 aa13.5□□□□□ -0.25
SCN5A-205ENST00000423572 NUTM2GQ5VZR2 741 aa13.49□□□□□ -0.25
SCN5A-205ENST00000423572 NEBLO76041 1014 aa13.49□□□□□ -0.25
SCN5A-205ENST00000423572 DRC1Q96MC2 740 aa13.49□□□□□ -0.25
SCN5A-205ENST00000423572 ST18O60284 1047 aa13.49□□□□□ -0.25
SCN5A-205ENST00000423572 PLCD3Q8N3E9 789 aa13.49□□□□□ -0.25
SCN5A-205ENST00000423572 RUFY2Q8WXA3 655 aa13.49□□□□□ -0.25
SCN5A-205ENST00000423572 XBP1P17861 261 aa13.49□□□□□ -0.25
SCN5A-205ENST00000423572 PMFBP1Q8TBY8 1022 aa13.49□□□□□ -0.25
SCN5A-205ENST00000423572 CRBNQ96SW2 442 aa13.48□□□□□ -0.25
SCN5A-205ENST00000423572 RRP12Q5JTH9 1297 aaKnown RBP13.48□□□□□ -0.25
SCN5A-205ENST00000423572 NAP1L1P55209 391 aaKnown RBP13.48□□□□□ -0.25
SCN5A-205ENST00000423572 PATL2C9JE40 543 aaKnown RBP13.48□□□□□ -0.25
SCN5A-205ENST00000423572 DNAI2Q9GZS0 605 aa13.48□□□□□ -0.25
SCN5A-205ENST00000423572 RTN4Q9NQC3 1192 aaKnown RBP13.48□□□□□ -0.25
SCN5A-205ENST00000423572 CCDC18Q5T9S5 1454 aa13.48□□□□□ -0.25
SCN5A-205ENST00000423572 MATR3P43243 847 aaKnown RBP eCLIP13.48□□□□□ -0.25
SCN5A-205ENST00000423572 CGNL1Q0VF96 1302 aa13.48□□□□□ -0.25
SCN5A-205ENST00000423572 AIMP1Q12904 312 aaKnown RBP13.48□□□□□ -0.25
SCN5A-205ENST00000423572 NEUROD6Q96NK8 337 aa13.47□□□□□ -0.25
SCN5A-205ENST00000423572 TBC1D2BQ9UPU7 963 aa13.47□□□□□ -0.25
SCN5A-205ENST00000423572 WDR78Q5VTH9 848 aa13.47□□□□□ -0.25
SCN5A-205ENST00000423572 SYCP1Q15431 976 aa13.47□□□□□ -0.25
SCN5A-205ENST00000423572 GOLGA6L19H0YKK7 550 aa13.46□□□□□ -0.25
SCN5A-205ENST00000423572 RALYLQ86SE5 291 aaKnown RBP13.46□□□□□ -0.25
SCN5A-205ENST00000423572 ABTB2Q8N961 1025 aa13.46□□□□□ -0.25
SCN5A-205ENST00000423572 CDK5RAP3Q96JB5 506 aa13.46□□□□□ -0.25
SCN5A-205ENST00000423572 TNIKQ9UKE5 1360 aa13.46□□□□□ -0.25
SCN5A-205ENST00000423572 DESP17661 470 aa13.46□□□□□ -0.26
SCN5A-205ENST00000423572 WASHC4Q2M389 1173 aa13.46□□□□□ -0.26
SCN5A-205ENST00000423572 JPH4Q96JJ6 628 aa13.46□□□□□ -0.26
SCN5A-205ENST00000423572 OFD1O75665 1012 aa13.45□□□□□ -0.26
SCN5A-205ENST00000423572 BEGAINQ9BUH8 593 aa13.45□□□□□ -0.26
SCN5A-205ENST00000423572 CCAR2Q8N163 923 aaKnown RBP13.45□□□□□ -0.26
SCN5A-205ENST00000423572 SCLT1Q96NL6 688 aa13.45□□□□□ -0.26
SCN5A-205ENST00000423572 PHLDB1Q86UU1 1377 aa13.45□□□□□ -0.26
SCN5A-205ENST00000423572 HSP90AB4PQ58FF6 505 aa13.45□□□□□ -0.26
SCN5A-205ENST00000423572 RFX1P22670 979 aa13.45□□□□□ -0.26
SCN5A-205ENST00000423572 DDX54Q8TDD1 881 aaKnown RBP13.44□□□□□ -0.26
SCN5A-205ENST00000423572 TCERG1O14776 1098 aaKnown RBP13.44□□□□□ -0.26
SCN5A-205ENST00000423572 SART3Q15020 963 aaKnown RBP13.44□□□□□ -0.26
SCN5A-205ENST00000423572 TDRD9Q8NDG6 1382 aaKnown RBP13.44□□□□□ -0.26
SCN5A-205ENST00000423572 NOP58Q9Y2X3 529 aaKnown RBP13.44□□□□□ -0.26
SCN5A-205ENST00000423572 ZKSCAN1P17029 563 aaPredicted RBP13.44□□□□□ -0.26
SCN5A-205ENST00000423572 KRT18P05783 430 aaKnown RBP13.43□□□□□ -0.26
SCN5A-205ENST00000423572 RNF20Q5VTR2 975 aa13.43□□□□□ -0.26
SCN5A-205ENST00000423572 AK7Q96M32 723 aa13.43□□□□□ -0.26
SCN5A-205ENST00000423572 CNNM1Q9NRU3 951 aa13.42□□□□□ -0.26
SCN5A-205ENST00000423572 CLEC11AQ9Y240 323 aa13.42□□□□□ -0.26
SCN5A-205ENST00000423572 FMN1Q68DA7 1419 aa13.42□□□□□ -0.26
SCN5A-205ENST00000423572 MFAP1P55081 439 aaKnown RBP13.42□□□□□ -0.26
SCN5A-205ENST00000423572 TNNT3P45378 269 aaPredicted RBP13.42□□□□□ -0.26
SCN5A-205ENST00000423572 NGLY1Q96IV0 654 aa13.42□□□□□ -0.26
SCN5A-205ENST00000423572 BECN2A8MW95 431 aa13.42□□□□□ -0.26
SCN5A-205ENST00000423572 CCDC146Q8IYE0 955 aa13.42□□□□□ -0.26
SCN5A-205ENST00000423572 POGZQ7Z3K3 1410 aa13.42□□□□□ -0.26
SCN5A-205ENST00000423572 ELL2O00472 640 aaPredicted RBP13.42□□□□□ -0.26
SCN5A-205ENST00000423572 ZPR1O75312 459 aa13.42□□□□□ -0.26
SCN5A-205ENST00000423572 ATP6V1DQ9Y5K8 247 aa13.41□□□□□ -0.26
SCN5A-205ENST00000423572 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.41□□□□□ -0.26
SCN5A-205ENST00000423572 CCDC173Q0VFZ6 552 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms