RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 CHMP4BQ9H444 224 aaKnown RBP13.36□□□□□ -0.27
SEMA4D-208ENST00000422704 CAMSAP2Q08AD1 1489 aa13.36□□□□□ -0.27
SEMA4D-208ENST00000422704 TRIM6-TRIM34B2RNG4 842 aa13.36□□□□□ -0.27
SEMA4D-208ENST00000422704 ABCC10Q5T3U5 1492 aa13.35□□□□□ -0.27
SEMA4D-208ENST00000422704 ADGBQ8N7X0 1667 aa13.35□□□□□ -0.27
SEMA4D-208ENST00000422704 ABCC2Q92887 1545 aa13.35□□□□□ -0.27
SEMA4D-208ENST00000422704 ABCC5O15440 1437 aa13.35□□□□□ -0.27
SEMA4D-208ENST00000422704 DRC7Q8IY82 874 aa13.34□□□□□ -0.27
SEMA4D-208ENST00000422704 CCDC9Q9Y3X0 531 aaKnown RBP13.34□□□□□ -0.27
SEMA4D-208ENST00000422704 CROCC2H7BZ55 1655 aa13.34□□□□□ -0.27
SEMA4D-208ENST00000422704 WASHC2CQ9Y4E1 1318 aa13.33□□□□□ -0.27
SEMA4D-208ENST00000422704 RRP1P56182 461 aaKnown RBP13.33□□□□□ -0.28
SEMA4D-208ENST00000422704 SPAG9O60271 1321 aaKnown RBP13.33□□□□□ -0.28
SEMA4D-208ENST00000422704 CDCA7LQ96GN5 454 aa13.33□□□□□ -0.28
SEMA4D-208ENST00000422704 UHRF1BP1LA0JNW5 1464 aa13.33□□□□□ -0.28
SEMA4D-208ENST00000422704 L1TD1Q5T7N2 865 aaKnown RBP13.32□□□□□ -0.28
SEMA4D-208ENST00000422704 KIAA1211Q6ZU35 1233 aa13.32□□□□□ -0.28
SEMA4D-208ENST00000422704 ADGRL2O95490 1459 aa13.32□□□□□ -0.28
SEMA4D-208ENST00000422704 SHANK2Q9UPX8 1470 aa13.32□□□□□ -0.28
SEMA4D-208ENST00000422704 CDC42BPAQ5VT25 1732 aa13.32□□□□□ -0.28
SEMA4D-208ENST00000422704 MYBBP1AQ9BQG0 1328 aaKnown RBP13.31□□□□□ -0.28
SEMA4D-208ENST00000422704 CHMP3Q9Y3E7 222 aa13.31□□□□□ -0.28
SEMA4D-208ENST00000422704 NECTIN2Q92692 538 aa13.31□□□□□ -0.28
SEMA4D-208ENST00000422704 MCCP23508 829 aa13.3□□□□□ -0.28
SEMA4D-208ENST00000422704 ANKRD45Q5TZF3 282 aa13.3□□□□□ -0.28
SEMA4D-208ENST00000422704 USP47Q96K76 1375 aa13.3□□□□□ -0.28
SEMA4D-208ENST00000422704 CSB-PGBD3P0DP91 1061 aa13.3□□□□□ -0.28
SEMA4D-208ENST00000422704 GBP4Q96PP9 640 aa13.3□□□□□ -0.28
SEMA4D-208ENST00000422704 ZBED9Q6R2W3 1325 aa13.29□□□□□ -0.28
SEMA4D-208ENST00000422704 MINK1Q8N4C8 1332 aaPredicted RBP13.29□□□□□ -0.28
SEMA4D-208ENST00000422704 CCDC184Q52MB2 194 aa13.29□□□□□ -0.28
SEMA4D-208ENST00000422704 PMFBP1Q8TBY8 1022 aa13.29□□□□□ -0.28
SEMA4D-208ENST00000422704 ARHGEF5Q12774 1597 aa13.29□□□□□ -0.28
SEMA4D-208ENST00000422704 KIF7Q2M1P5 1343 aa13.29□□□□□ -0.28
SEMA4D-208ENST00000422704 PDE3BQ13370 1112 aa13.29□□□□□ -0.28
SEMA4D-208ENST00000422704 ISY1Q9ULR0 285 aaKnown RBP13.29□□□□□ -0.28
SEMA4D-208ENST00000422704 GOLGA6L3A6NEY3 463 aa13.28□□□□□ -0.28
SEMA4D-208ENST00000422704 NGDNQ8NEJ9 315 aaKnown RBP13.28□□□□□ -0.28
SEMA4D-208ENST00000422704 STK31Q9BXU1 1019 aa13.28□□□□□ -0.28
SEMA4D-208ENST00000422704 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
SEMA4D-208ENST00000422704 WASHC2AQ641Q2 1341 aa13.27□□□□□ -0.28
SEMA4D-208ENST00000422704 TERF2IPQ9NYB0 399 aa13.27□□□□□ -0.29
SEMA4D-208ENST00000422704 ERCC6L2Q5T890 1561 aa13.27□□□□□ -0.29
SEMA4D-208ENST00000422704 KIF15Q9NS87 1388 aa13.26□□□□□ -0.29
SEMA4D-208ENST00000422704 AMPHP49418 695 aa13.25□□□□□ -0.29
SEMA4D-208ENST00000422704 CALD1Q05682 793 aaKnown RBP13.25□□□□□ -0.29
SEMA4D-208ENST00000422704 RILPL2Q969X0 211 aa13.25□□□□□ -0.29
SEMA4D-208ENST00000422704 FAM161AQ3B820 660 aa13.25□□□□□ -0.29
SEMA4D-208ENST00000422704 KDM6BO15054 1643 aa13.25□□□□□ -0.29
SEMA4D-208ENST00000422704 PANK1Q8TE04 598 aa13.25□□□□□ -0.29
SEMA4D-208ENST00000422704 RSPH4AQ5TD94 716 aa13.24□□□□□ -0.29
SEMA4D-208ENST00000422704 NGEFQ8N5V2 710 aa13.24□□□□□ -0.29
SEMA4D-208ENST00000422704 NCOA1Q15788 1441 aa13.24□□□□□ -0.29
SEMA4D-208ENST00000422704 KDM5BQ9UGL1 1544 aa13.24□□□□□ -0.29
SEMA4D-208ENST00000422704 TMEM132EQ6IEE7 984 aa13.24□□□□□ -0.29
SEMA4D-208ENST00000422704 PLEKHH2Q8IVE3 1493 aa13.24□□□□□ -0.29
SEMA4D-208ENST00000422704 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.23□□□□□ -0.29
SEMA4D-208ENST00000422704 HDGFP51858 240 aaKnown RBP13.23□□□□□ -0.29
SEMA4D-208ENST00000422704 ZCCHC11Q5TAX3 1644 aaKnown RBP13.23□□□□□ -0.29
SEMA4D-208ENST00000422704 CCDC144AA2RUR9 1427 aa13.23□□□□□ -0.29
SEMA4D-208ENST00000422704 ADAMTS8Q9UP79 889 aa13.23□□□□□ -0.29
SEMA4D-208ENST00000422704 GNL2Q13823 731 aaKnown RBP13.22□□□□□ -0.29
SEMA4D-208ENST00000422704 CENPQQ7L2Z9 268 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-208ENST00000422704 LNPKQ9C0E8 428 aa13.22□□□□□ -0.29
SEMA4D-208ENST00000422704 CHAF1AQ13111 956 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-208ENST00000422704 HMOX1P09601 288 aa13.21□□□□□ -0.29
SEMA4D-208ENST00000422704 GSE1Q14687 1217 aa13.21□□□□□ -0.29
SEMA4D-208ENST00000422704 MYO5CQ9NQX4 1742 aa13.21□□□□□ -0.29
SEMA4D-208ENST00000422704 DDX49Q9Y6V7 483 aaKnown RBP13.21□□□□□ -0.29
SEMA4D-208ENST00000422704 C9orf84Q5VXU9 1444 aa13.21□□□□□ -0.29
SEMA4D-208ENST00000422704 CDC42BPBQ9Y5S2 1711 aa13.21□□□□□ -0.29
SEMA4D-208ENST00000422704 NBPF1Q3BBV0 1214 aa13.21□□□□□ -0.3
SEMA4D-208ENST00000422704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.21□□□□□ -0.3
SEMA4D-208ENST00000422704 GGNBP2Q9H3C7 697 aa13.2□□□□□ -0.3
SEMA4D-208ENST00000422704 CCDC141Q6ZP82 1450 aa13.2□□□□□ -0.3
SEMA4D-208ENST00000422704 GORABQ5T7V8 394 aa13.2□□□□□ -0.3
SEMA4D-208ENST00000422704 ZKSCAN2Q63HK3 967 aa13.2□□□□□ -0.3
SEMA4D-208ENST00000422704 SAMD9LQ8IVG5 1584 aa13.2□□□□□ -0.3
SEMA4D-208ENST00000422704 MAST1Q9Y2H9 1570 aa13.2□□□□□ -0.3
SEMA4D-208ENST00000422704 EIF2S2P20042 333 aaKnown RBP13.2□□□□□ -0.3
SEMA4D-208ENST00000422704 SKAP1Q86WV1 359 aa13.2□□□□□ -0.3
SEMA4D-208ENST00000422704 NCBP3Q53F19 620 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-208ENST00000422704 ZNF428Q96B54 188 aa13.19□□□□□ -0.3
SEMA4D-208ENST00000422704 TTC37Q6PGP7 1564 aa13.19□□□□□ -0.3
SEMA4D-208ENST00000422704 KIAA2012Q0VF49 1180 aa13.19□□□□□ -0.3
SEMA4D-208ENST00000422704 E9PSI1 815 aa13.19□□□□□ -0.3
SEMA4D-208ENST00000422704 NRDCO43847 1150 aa13.18□□□□□ -0.3
SEMA4D-208ENST00000422704 ARHGAP5Q13017 1502 aa13.18□□□□□ -0.3
SEMA4D-208ENST00000422704 DENND4BO75064 1496 aaPredicted RBP13.18□□□□□ -0.3
SEMA4D-208ENST00000422704 CCDC7Q96M83 1385 aa13.18□□□□□ -0.3
SEMA4D-208ENST00000422704 RIPK4P57078 832 aa13.18□□□□□ -0.3
SEMA4D-208ENST00000422704 KIAA1107Q9UPP5 1409 aa13.18□□□□□ -0.3
SEMA4D-208ENST00000422704 NBPF8Q3BBV2 869 aa13.18□□□□□ -0.3
SEMA4D-208ENST00000422704 CYB5RLQ6IPT4 315 aa13.18□□□□□ -0.3
SEMA4D-208ENST00000422704 CREBRFQ8IUR6 639 aa13.18□□□□□ -0.3
SEMA4D-208ENST00000422704 MBD5Q9P267 1494 aa13.18□□□□□ -0.3
SEMA4D-208ENST00000422704 HMMRO75330 724 aa13.18□□□□□ -0.3
SEMA4D-208ENST00000422704 HSP90B1P14625 803 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-208ENST00000422704 ARAP3Q8WWN8 1544 aa13.17□□□□□ -0.3
SEMA4D-208ENST00000422704 KDM5DQ9BY66 1539 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms