RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 AEBP2Q6ZN18 517 aaPredicted RBP11.23□□□□□ -0.61
CD109-202ENST00000422508 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
CD109-202ENST00000422508 DCAF11Q8TEB1 546 aa11.23□□□□□ -0.61
CD109-202ENST00000422508 CHMP5Q9NZZ3 219 aa11.23□□□□□ -0.61
CD109-202ENST00000422508 TRIM34Q9BYJ4 488 aa11.22□□□□□ -0.61
CD109-202ENST00000422508 FAM107BQ9H098 131 aa11.22□□□□□ -0.61
CD109-202ENST00000422508 VPS53Q5VIR6 699 aa11.22□□□□□ -0.61
CD109-202ENST00000422508 CCDC43Q96MW1 224 aaKnown RBP11.22□□□□□ -0.61
CD109-202ENST00000422508 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.21□□□□□ -0.61
CD109-202ENST00000422508 E9PSI1 815 aa11.21□□□□□ -0.61
CD109-202ENST00000422508 MBD3O95983 291 aa11.21□□□□□ -0.61
CD109-202ENST00000422508 TRDNQ13061 729 aa11.21□□□□□ -0.61
CD109-202ENST00000422508 CREBRFQ8IUR6 639 aa11.21□□□□□ -0.61
CD109-202ENST00000422508 PCMTD1Q96MG8 357 aaPredicted RBP11.21□□□□□ -0.61
CD109-202ENST00000422508 ERICH2A1L162 156 aa11.21□□□□□ -0.62
CD109-202ENST00000422508 MYBBP1AQ9BQG0 1328 aaKnown RBP11.2□□□□□ -0.62
CD109-202ENST00000422508 MCM3P25205 808 aa11.2□□□□□ -0.62
CD109-202ENST00000422508 POLR3GO15318 223 aaPredicted RBP11.2□□□□□ -0.62
CD109-202ENST00000422508 HSP90AB4PQ58FF6 505 aa11.2□□□□□ -0.62
CD109-202ENST00000422508 CCDC73Q6ZRK6 1079 aa11.2□□□□□ -0.62
CD109-202ENST00000422508 LMOD2Q6P5Q4 547 aa11.2□□□□□ -0.62
CD109-202ENST00000422508 HMGB1P09429 215 aaKnown RBP11.2□□□□□ -0.62
CD109-202ENST00000422508 DDX19BQ9UMR2 479 aa11.2□□□□□ -0.62
CD109-202ENST00000422508 PDCL2Q8N4E4 241 aa11.19□□□□□ -0.62
CD109-202ENST00000422508 ERLIN1O75477 346 aa11.19□□□□□ -0.62
CD109-202ENST00000422508 U2AF1L5P0DN76 240 aaPredicted RBP11.19□□□□□ -0.62
CD109-202ENST00000422508 U2AF1Q01081 240 aaKnown RBP eCLIP11.19□□□□□ -0.62
CD109-202ENST00000422508 DYDC1Q8WWB3 177 aa11.19□□□□□ -0.62
CD109-202ENST00000422508 ABCC8Q09428 1581 aa11.19□□□□□ -0.62
CD109-202ENST00000422508 DESP17661 470 aa11.19□□□□□ -0.62
CD109-202ENST00000422508 NF2P35240 595 aa11.19□□□□□ -0.62
CD109-202ENST00000422508 HIP1O00291 1037 aa11.18□□□□□ -0.62
CD109-202ENST00000422508 CPLX1O14810 134 aa11.18□□□□□ -0.62
CD109-202ENST00000422508 ERC2O15083 957 aa11.18□□□□□ -0.62
CD109-202ENST00000422508 PSMA5P28066 241 aa11.18□□□□□ -0.62
CD109-202ENST00000422508 DNAI2Q9GZS0 605 aa11.18□□□□□ -0.62
CD109-202ENST00000422508 MIA2Q96PC5 1412 aa11.18□□□□□ -0.62
CD109-202ENST00000422508 MRE11P49959 708 aa11.18□□□□□ -0.62
CD109-202ENST00000422508 TOP2AP11388 1531 aaKnown RBP11.18□□□□□ -0.62
CD109-202ENST00000422508 NEFHP12036 1026 aa11.18□□□□□ -0.62
CD109-202ENST00000422508 CHMP3Q9Y3E7 222 aa11.18□□□□□ -0.62
CD109-202ENST00000422508 DHX16O60231 1041 aaKnown RBP11.18□□□□□ -0.62
CD109-202ENST00000422508 GBP2P32456 591 aaPredicted RBP11.18□□□□□ -0.62
CD109-202ENST00000422508 INTS3Q68E01 1043 aaKnown RBP11.18□□□□□ -0.62
CD109-202ENST00000422508 VSIG10Q8N0Z9 540 aa11.18□□□□□ -0.62
CD109-202ENST00000422508 DEF6Q9H4E7 631 aa11.18□□□□□ -0.62
CD109-202ENST00000422508 PKNOX2Q96KN3 472 aa11.17□□□□□ -0.62
CD109-202ENST00000422508 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.17□□□□□ -0.62
CD109-202ENST00000422508 TRIM21P19474 475 aaKnown RBP11.17□□□□□ -0.62
CD109-202ENST00000422508 DDX11Q96FC9 970 aa11.17□□□□□ -0.62
CD109-202ENST00000422508 HMGB2P26583 209 aaKnown RBP11.17□□□□□ -0.62
CD109-202ENST00000422508 TXLNAP40222 546 aa11.17□□□□□ -0.62
CD109-202ENST00000422508 HSP90AB2PQ58FF8 381 aa11.17□□□□□ -0.62
CD109-202ENST00000422508 CTDP1Q9Y5B0 961 aaPredicted RBP11.17□□□□□ -0.62
CD109-202ENST00000422508 HMGB1P1B2RPK0 211 aaPredicted RBP11.17□□□□□ -0.62
CD109-202ENST00000422508 CCDC144AA2RUR9 1427 aa11.17□□□□□ -0.62
CD109-202ENST00000422508 KIF2AO00139 706 aaPredicted RBP11.17□□□□□ -0.62
CD109-202ENST00000422508 KIF3BO15066 747 aa11.16□□□□□ -0.62
CD109-202ENST00000422508 IFT57Q9NWB7 429 aa11.16□□□□□ -0.62
CD109-202ENST00000422508 R3HCC1Q9Y3T6 440 aaKnown RBP11.16□□□□□ -0.62
CD109-202ENST00000422508 SLC26A8Q96RN1 970 aa11.16□□□□□ -0.62
CD109-202ENST00000422508 DACH1Q9UI36 760 aa11.16□□□□□ -0.62
CD109-202ENST00000422508 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.16□□□□□ -0.62
CD109-202ENST00000422508 GOLGA6L10A0A0M3HER8 536 aa11.16□□□□□ -0.62
CD109-202ENST00000422508 NASPP49321 788 aaPredicted RBP11.16□□□□□ -0.62
CD109-202ENST00000422508 IL27Q8NEV9 243 aa11.16□□□□□ -0.62
CD109-202ENST00000422508 ARID3AQ99856 593 aa11.16□□□□□ -0.62
CD109-202ENST00000422508 KIF21BO75037 1637 aa11.16□□□□□ -0.62
CD109-202ENST00000422508 WWC2Q6AWC2 1192 aa11.16□□□□□ -0.62
CD109-202ENST00000422508 HIRIP3Q9BW71 556 aaPredicted RBP11.16□□□□□ -0.62
CD109-202ENST00000422508 CCDC7Q96M83 1385 aa11.16□□□□□ -0.62
CD109-202ENST00000422508 PATL2C9JE40 543 aaKnown RBP11.16□□□□□ -0.62
CD109-202ENST00000422508 FILIP1LQ4L180 1135 aa11.16□□□□□ -0.62
CD109-202ENST00000422508 ZNF592Q92610 1267 aa11.16□□□□□ -0.62
CD109-202ENST00000422508 STAC3Q96MF2 364 aa11.16□□□□□ -0.62
CD109-202ENST00000422508 SEPT7Q16181 437 aaKnown RBP11.15□□□□□ -0.62
CD109-202ENST00000422508 JMYQ8N9B5 988 aa11.15□□□□□ -0.62
CD109-202ENST00000422508 KCNH8Q96L42 1107 aa11.15□□□□□ -0.62
CD109-202ENST00000422508 ZNHIT6Q9NWK9 470 aaKnown RBP11.15□□□□□ -0.63
CD109-202ENST00000422508 ZKSCAN2Q63HK3 967 aa11.14□□□□□ -0.63
CD109-202ENST00000422508 FRAT2O75474 233 aaPredicted RBP11.14□□□□□ -0.63
CD109-202ENST00000422508 DDX58O95786 925 aaKnown RBP11.14□□□□□ -0.63
CD109-202ENST00000422508 NAP1L1P55209 391 aaKnown RBP11.14□□□□□ -0.63
CD109-202ENST00000422508 MCTP1Q6DN14 999 aa11.14□□□□□ -0.63
CD109-202ENST00000422508 SPATA24Q86W54 205 aa11.14□□□□□ -0.63
CD109-202ENST00000422508 OFD1O75665 1012 aa11.14□□□□□ -0.63
CD109-202ENST00000422508 STIM1Q13586 685 aa11.14□□□□□ -0.63
CD109-202ENST00000422508 RRP9O43818 475 aaKnown RBP11.14□□□□□ -0.63
CD109-202ENST00000422508 BICD2Q8TD16 824 aa11.13□□□□□ -0.63
CD109-202ENST00000422508 CNKSR2Q8WXI2 1034 aa11.13□□□□□ -0.63
CD109-202ENST00000422508 SART3Q15020 963 aaKnown RBP11.13□□□□□ -0.63
CD109-202ENST00000422508 MYO15BQ96JP2 1530 aa11.13□□□□□ -0.63
CD109-202ENST00000422508 SYCP1Q15431 976 aa11.13□□□□□ -0.63
CD109-202ENST00000422508 MAGEC2Q9UBF1 373 aaPredicted RBP11.13□□□□□ -0.63
CD109-202ENST00000422508 CCDC91Q7Z6B0 441 aa11.12□□□□□ -0.63
CD109-202ENST00000422508 FAM13BQ9NYF5 915 aa11.12□□□□□ -0.63
CD109-202ENST00000422508 EID1Q9Y6B2 187 aa11.12□□□□□ -0.63
CD109-202ENST00000422508 MAP9Q49MG5 647 aa11.12□□□□□ -0.63
CD109-202ENST00000422508 CNTLNQ9NXG0 1405 aa11.12□□□□□ -0.63
CD109-202ENST00000422508 KINO60870 393 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms