RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 WASHC2CQ9Y4E1 1318 aa16.55■□□□□ 0.24
COL20A1-203ENST00000422202 VSIG10Q8N0Z9 540 aa16.55■□□□□ 0.24
COL20A1-203ENST00000422202 AK7Q96M32 723 aa16.55■□□□□ 0.24
COL20A1-203ENST00000422202 FHAD1B1AJZ9 1412 aa16.54■□□□□ 0.24
COL20A1-203ENST00000422202 SKIDA1Q1XH10 827 aa16.54■□□□□ 0.24
COL20A1-203ENST00000422202 ARHGAP35Q9NRY4 1499 aa16.54■□□□□ 0.24
COL20A1-203ENST00000422202 RBM19Q9Y4C8 960 aaKnown RBP16.54■□□□□ 0.24
COL20A1-203ENST00000422202 MAP7D2Q96T17 732 aa16.54■□□□□ 0.24
COL20A1-203ENST00000422202 RALBP1Q15311 655 aa16.53■□□□□ 0.24
COL20A1-203ENST00000422202 DDX11L8A8MPP1 907 aa16.53■□□□□ 0.24
COL20A1-203ENST00000422202 TEX35Q5T0J7 233 aa16.52■□□□□ 0.24
COL20A1-203ENST00000422202 KIF3BO15066 747 aa16.52■□□□□ 0.24
COL20A1-203ENST00000422202 PSME1Q06323 249 aa16.52■□□□□ 0.23
COL20A1-203ENST00000422202 KDM4AO75164 1064 aa16.51■□□□□ 0.23
COL20A1-203ENST00000422202 DDX49Q9Y6V7 483 aaKnown RBP16.51■□□□□ 0.23
COL20A1-203ENST00000422202 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
COL20A1-203ENST00000422202 IFIT2P09913 472 aaKnown RBP16.51■□□□□ 0.23
COL20A1-203ENST00000422202 PRDM2Q13029 1718 aa16.51■□□□□ 0.23
COL20A1-203ENST00000422202 BICD2Q8TD16 824 aa16.5■□□□□ 0.23
COL20A1-203ENST00000422202 RUFY2Q8WXA3 655 aa16.5■□□□□ 0.23
COL20A1-203ENST00000422202 PLIN1O60240 522 aa16.5■□□□□ 0.23
COL20A1-203ENST00000422202 TRAK1Q9UPV9 953 aa16.5■□□□□ 0.23
COL20A1-203ENST00000422202 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
COL20A1-203ENST00000422202 COG3Q96JB2 828 aa16.49■□□□□ 0.23
COL20A1-203ENST00000422202 CYB5RLQ6IPT4 315 aa16.49■□□□□ 0.23
COL20A1-203ENST00000422202 RDXP35241 583 aaKnown RBP16.49■□□□□ 0.23
COL20A1-203ENST00000422202 CDR1P51861 262 aa16.49■□□□□ 0.23
COL20A1-203ENST00000422202 BCL2L13Q9BXK5 485 aa16.48■□□□□ 0.23
COL20A1-203ENST00000422202 OFD1O75665 1012 aa16.48■□□□□ 0.23
COL20A1-203ENST00000422202 NUP155O75694 1391 aa16.48■□□□□ 0.23
COL20A1-203ENST00000422202 WRNQ14191 1432 aaPredicted RBP eCLIP16.48■□□□□ 0.23
COL20A1-203ENST00000422202 CCDC173Q0VFZ6 552 aa16.47■□□□□ 0.23
COL20A1-203ENST00000422202 TTLL5Q6EMB2 1281 aa16.47■□□□□ 0.23
COL20A1-203ENST00000422202 ZKSCAN1P17029 563 aaPredicted RBP16.47■□□□□ 0.23
COL20A1-203ENST00000422202 SAFBQ15424 915 aaKnown RBP eCLIP16.47■□□□□ 0.23
COL20A1-203ENST00000422202 EEA1Q15075 1411 aa16.47■□□□□ 0.23
COL20A1-203ENST00000422202 CAGE1Q8TC20 777 aa16.46■□□□□ 0.23
COL20A1-203ENST00000422202 CCDC97Q96F63 343 aaPredicted RBP16.46■□□□□ 0.23
COL20A1-203ENST00000422202 BRMS1Q9HCU9 246 aa16.46■□□□□ 0.22
COL20A1-203ENST00000422202 PPM1FP49593 454 aaPredicted RBP16.45■□□□□ 0.22
COL20A1-203ENST00000422202 SASS6Q6UVJ0 657 aa16.45■□□□□ 0.22
COL20A1-203ENST00000422202 DDX58O95786 925 aaKnown RBP16.45■□□□□ 0.22
COL20A1-203ENST00000422202 CARMIL2Q6F5E8 1435 aa16.45■□□□□ 0.22
COL20A1-203ENST00000422202 PDILTQ8N807 584 aa16.44■□□□□ 0.22
COL20A1-203ENST00000422202 NEFHP12036 1026 aa16.44■□□□□ 0.22
COL20A1-203ENST00000422202 G3BP1Q13283 466 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL20A1-203ENST00000422202 RNF20Q5VTR2 975 aa16.43■□□□□ 0.22
COL20A1-203ENST00000422202 HNRNPMP52272 730 aaKnown RBP eCLIP16.42■□□□□ 0.22
COL20A1-203ENST00000422202 SYCP1Q15431 976 aa16.42■□□□□ 0.22
COL20A1-203ENST00000422202 MYO6Q9UM54 1294 aa16.42■□□□□ 0.22
COL20A1-203ENST00000422202 SETD5Q9C0A6 1442 aa16.41■□□□□ 0.22
COL20A1-203ENST00000422202 IBSPP21815 317 aaPredicted RBP16.41■□□□□ 0.22
COL20A1-203ENST00000422202 ANKRD62A6NC57 917 aa16.41■□□□□ 0.22
COL20A1-203ENST00000422202 OLFM4Q6UX06 510 aa16.41■□□□□ 0.22
COL20A1-203ENST00000422202 ATP2B2Q01814 1243 aa16.41■□□□□ 0.22
COL20A1-203ENST00000422202 WASHC4Q2M389 1173 aa16.41■□□□□ 0.22
COL20A1-203ENST00000422202 NEUROD6Q96NK8 337 aa16.41■□□□□ 0.22
COL20A1-203ENST00000422202 VPS37CA5D8V6 355 aaPredicted RBP16.4■□□□□ 0.22
COL20A1-203ENST00000422202 CCER2I3L3R5 266 aa16.4■□□□□ 0.22
COL20A1-203ENST00000422202 EFCAB2Q5VUJ9 269 aa16.4■□□□□ 0.22
COL20A1-203ENST00000422202 IPO9Q96P70 1041 aaKnown RBP16.4■□□□□ 0.22
COL20A1-203ENST00000422202 FAM177BA6PVY3 158 aa16.4■□□□□ 0.22
COL20A1-203ENST00000422202 RALYLQ86SE5 291 aaKnown RBP16.4■□□□□ 0.22
COL20A1-203ENST00000422202 CDK5RAP3Q96JB5 506 aa16.4■□□□□ 0.22
COL20A1-203ENST00000422202 PLCD4Q9BRC7 762 aa16.4■□□□□ 0.22
COL20A1-203ENST00000422202 ATF3P18847 181 aa16.4■□□□□ 0.22
COL20A1-203ENST00000422202 AIMP1Q12904 312 aaKnown RBP16.4■□□□□ 0.22
COL20A1-203ENST00000422202 ZRSR2Q15696 482 aaKnown RBP16.4■□□□□ 0.22
COL20A1-203ENST00000422202 RIC3Q7Z5B4 369 aa16.39■□□□□ 0.21
COL20A1-203ENST00000422202 XBP1P17861 261 aa16.39■□□□□ 0.21
COL20A1-203ENST00000422202 CCDC191Q8NCU4 936 aa16.39■□□□□ 0.21
COL20A1-203ENST00000422202 MPHOSPH9Q99550 1183 aa16.38■□□□□ 0.21
COL20A1-203ENST00000422202 SKOR2Q2VWA4 1001 aaPredicted RBP16.38■□□□□ 0.21
COL20A1-203ENST00000422202 CGNL1Q0VF96 1302 aa16.38■□□□□ 0.21
COL20A1-203ENST00000422202 DCTN1Q14203 1278 aa16.38■□□□□ 0.21
COL20A1-203ENST00000422202 SEPT7Q16181 437 aaKnown RBP16.38■□□□□ 0.21
COL20A1-203ENST00000422202 PIP4K2BP78356 416 aa16.38■□□□□ 0.21
COL20A1-203ENST00000422202 NOM1Q5C9Z4 860 aaKnown RBP16.38■□□□□ 0.21
COL20A1-203ENST00000422202 ACBD3Q9H3P7 528 aa16.37■□□□□ 0.21
COL20A1-203ENST00000422202 CUX2O14529 1486 aa16.37■□□□□ 0.21
COL20A1-203ENST00000422202 IFT57Q9NWB7 429 aa16.36■□□□□ 0.21
COL20A1-203ENST00000422202 ANKRD30AQ9BXX3 1397 aa16.36■□□□□ 0.21
COL20A1-203ENST00000422202 REC8O95072 547 aa16.36■□□□□ 0.21
COL20A1-203ENST00000422202 MNS1Q8NEH6 495 aa16.36■□□□□ 0.21
COL20A1-203ENST00000422202 SMC3Q9UQE7 1217 aa16.36■□□□□ 0.21
COL20A1-203ENST00000422202 PAXIP1Q6ZW49 1069 aaPredicted RBP16.36■□□□□ 0.21
COL20A1-203ENST00000422202 NUTM2BA6NNL0 878 aaPredicted RBP16.35■□□□□ 0.21
COL20A1-203ENST00000422202 NUTM2EB1AL46 878 aaPredicted RBP16.35■□□□□ 0.21
COL20A1-203ENST00000422202 NUTM2AQ8IVF1 878 aaPredicted RBP16.35■□□□□ 0.21
COL20A1-203ENST00000422202 HSP90B2PQ58FF3 399 aa16.35■□□□□ 0.21
COL20A1-203ENST00000422202 WASHC2AQ641Q2 1341 aa16.35■□□□□ 0.21
COL20A1-203ENST00000422202 KRT18P05783 430 aaKnown RBP16.34■□□□□ 0.21
COL20A1-203ENST00000422202 MATR3P43243 847 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL20A1-203ENST00000422202 FKBP5Q13451 457 aaPredicted RBP16.34■□□□□ 0.21
COL20A1-203ENST00000422202 BRPF1P55201 1214 aaPredicted RBP16.34■□□□□ 0.21
COL20A1-203ENST00000422202 MAGEC2Q9UBF1 373 aaPredicted RBP16.33■□□□□ 0.21
COL20A1-203ENST00000422202 H0YHG0 523 aa16.33■□□□□ 0.21
COL20A1-203ENST00000422202 MINK1Q8N4C8 1332 aaPredicted RBP16.33■□□□□ 0.2
COL20A1-203ENST00000422202 CARMIL1Q5VZK9 1371 aa16.32■□□□□ 0.2
COL20A1-203ENST00000422202 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms