RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 CCDC144AA2RUR9 1427 aa28.52■■■□□ 2.16
GCDH-202ENST00000421816 ANKRD30BQ9BXX2 1392 aa28.5■■■□□ 2.15
GCDH-202ENST00000421816 HDGFP51858 240 aaKnown RBP28.47■■■□□ 2.15
GCDH-202ENST00000421816 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.46■■■□□ 2.15
GCDH-202ENST00000421816 NEXMIFQ5QGS0 1516 aa28.44■■■□□ 2.14
GCDH-202ENST00000421816 SPATA31E1Q6ZUB1 1445 aa28.43■■■□□ 2.14
GCDH-202ENST00000421816 ZNF326Q5BKZ1 582 aaKnown RBP28.43■■■□□ 2.14
GCDH-202ENST00000421816 PLEKHG1Q9ULL1 1385 aa28.42■■■□□ 2.14
GCDH-202ENST00000421816 PPP1R15AO75807 674 aaPredicted RBP28.39■■■□□ 2.14
GCDH-202ENST00000421816 PPLO60437 1756 aa28.39■■■□□ 2.13
GCDH-202ENST00000421816 NUTM2DQ5VT03 806 aaPredicted RBP28.38■■■□□ 2.13
GCDH-202ENST00000421816 LTBP4Q8N2S1 1624 aa28.38■■■□□ 2.13
GCDH-202ENST00000421816 RPGRIP1LQ68CZ1 1315 aa28.38■■■□□ 2.13
GCDH-202ENST00000421816 ZNF335Q9H4Z2 1342 aaPredicted RBP28.36■■■□□ 2.13
GCDH-202ENST00000421816 IFT172Q9UG01 1749 aa28.35■■■□□ 2.13
GCDH-202ENST00000421816 PCGF6Q9BYE7 350 aa28.35■■■□□ 2.13
GCDH-202ENST00000421816 DHX57Q6P158 1386 aaKnown RBP28.35■■■□□ 2.13
GCDH-202ENST00000421816 SETBP1Q9Y6X0 1596 aa28.32■■■□□ 2.12
GCDH-202ENST00000421816 NRXN3Q9Y4C0 1643 aa28.32■■■□□ 2.12
GCDH-202ENST00000421816 RGL3Q3MIN7 710 aa28.31■■■□□ 2.12
GCDH-202ENST00000421816 ADAMTS13Q76LX8 1427 aa28.31■■■□□ 2.12
GCDH-202ENST00000421816 DIP2AQ14689 1571 aa28.3■■■□□ 2.12
GCDH-202ENST00000421816 SLC26A8Q96RN1 970 aa28.3■■■□□ 2.12
GCDH-202ENST00000421816 STRCP1A6NGW2 1772 aa28.29■■■□□ 2.12
GCDH-202ENST00000421816 VGFO15240 615 aaPredicted RBP28.29■■■□□ 2.12
GCDH-202ENST00000421816 BCANQ96GW7 911 aa28.29■■■□□ 2.12
GCDH-202ENST00000421816 TBX22Q9Y458 520 aa28.27■■■□□ 2.12
GCDH-202ENST00000421816 SENP3Q9H4L4 574 aaPredicted RBP28.26■■■□□ 2.11
GCDH-202ENST00000421816 CPS1P31327 1500 aa28.25■■■□□ 2.11
GCDH-202ENST00000421816 CERKQ8TCT0 537 aa28.23■■■□□ 2.11
GCDH-202ENST00000421816 CHD2O14647 1828 aaKnown RBP28.22■■■□□ 2.11
GCDH-202ENST00000421816 NWD1Q149M9 1564 aa28.22■■■□□ 2.11
GCDH-202ENST00000421816 SETD1AO15047 1707 aaKnown RBP28.2■■■□□ 2.1
GCDH-202ENST00000421816 MYOM2P54296 1465 aa28.2■■■□□ 2.1
GCDH-202ENST00000421816 ADGRF5Q8IZF2 1346 aa28.19■■■□□ 2.1
GCDH-202ENST00000421816 PIK3R4Q99570 1358 aa28.19■■■□□ 2.1
GCDH-202ENST00000421816 KCNA6P17658 529 aa28.18■■■□□ 2.1
GCDH-202ENST00000421816 IQSEC2Q5JU85 1478 aa28.18■■■□□ 2.1
GCDH-202ENST00000421816 ALKQ9UM73 1620 aa28.18■■■□□ 2.1
GCDH-202ENST00000421816 NRXN1Q9ULB1 1477 aa28.17■■■□□ 2.1
GCDH-202ENST00000421816 PIK3C2GO75747 1445 aa28.15■■■□□ 2.1
GCDH-202ENST00000421816 LRRC7Q96NW7 1537 aa28.14■■■□□ 2.1
GCDH-202ENST00000421816 SIN3AQ96ST3 1273 aa28.13■■■□□ 2.09
GCDH-202ENST00000421816 NKTRP30414 1462 aaKnown RBP28.13■■■□□ 2.09
GCDH-202ENST00000421816 METP08581 1390 aa28.12■■■□□ 2.09
GCDH-202ENST00000421816 PTPRUQ92729 1446 aa28.12■■■□□ 2.09
GCDH-202ENST00000421816 STAC3Q96MF2 364 aa28.11■■■□□ 2.09
GCDH-202ENST00000421816 XRN1Q8IZH2 1706 aaKnown RBP28.1■■■□□ 2.09
GCDH-202ENST00000421816 DCAF11Q8TEB1 546 aa28.1■■■□□ 2.09
GCDH-202ENST00000421816 XIRP1Q702N8 1843 aaKnown RBP28.1■■■□□ 2.09
GCDH-202ENST00000421816 LAMC1P11047 1609 aa28.07■■■□□ 2.08
GCDH-202ENST00000421816 AMOTL2Q9Y2J4 779 aa28.05■■■□□ 2.08
GCDH-202ENST00000421816 NEUROD1Q13562 356 aa28.04■■■□□ 2.08
GCDH-202ENST00000421816 KDM2AQ9Y2K7 1162 aa28.04■■■□□ 2.08
GCDH-202ENST00000421816 C14orf93Q9H972 538 aaKnown RBP28.03■■■□□ 2.08
GCDH-202ENST00000421816 ASXL1Q8IXJ9 1541 aa28.02■■■□□ 2.08
GCDH-202ENST00000421816 PROSER2Q86WR7 435 aaPredicted RBP28.02■■■□□ 2.08
GCDH-202ENST00000421816 TMEM94Q12767 1356 aa28.01■■■□□ 2.07
GCDH-202ENST00000421816 PRAG1Q86YV5 1406 aa28.01■■■□□ 2.07
GCDH-202ENST00000421816 CFAP70Q5T0N1 1121 aa27.99■■■□□ 2.07
GCDH-202ENST00000421816 L3MBTL2Q969R5 705 aa27.99■■■□□ 2.07
GCDH-202ENST00000421816 FBXO41Q8TF61 875 aa27.97■■■□□ 2.07
GCDH-202ENST00000421816 NCOA3Q9Y6Q9 1424 aa27.96■■■□□ 2.07
GCDH-202ENST00000421816 KNDC1Q76NI1 1749 aa27.95■■■□□ 2.06
GCDH-202ENST00000421816 CLSPNQ9HAW4 1339 aa27.94■■■□□ 2.06
GCDH-202ENST00000421816 PTCH1Q13635 1447 aa27.94■■■□□ 2.06
GCDH-202ENST00000421816 TMEM132EQ6IEE7 984 aa27.94■■■□□ 2.06
GCDH-202ENST00000421816 RBM33Q96EV2 1170 aaKnown RBP27.94■■■□□ 2.06
GCDH-202ENST00000421816 KIAA1210Q9ULL0 1709 aa27.94■■■□□ 2.06
GCDH-202ENST00000421816 LRPPRCP42704 1394 aaKnown RBP27.94■■■□□ 2.06
GCDH-202ENST00000421816 ADGRB1O14514 1584 aa27.93■■■□□ 2.06
GCDH-202ENST00000421816 TECPR2O15040 1411 aa27.92■■■□□ 2.06
GCDH-202ENST00000421816 YTHDC2Q9H6S0 1430 aaKnown RBP27.92■■■□□ 2.06
GCDH-202ENST00000421816 ABCC11Q96J66 1382 aa27.9■■■□□ 2.06
GCDH-202ENST00000421816 ROBO2Q9HCK4 1378 aa27.9■■■□□ 2.06
GCDH-202ENST00000421816 UBAP1LF5GYI3 381 aa27.88■■■□□ 2.05
GCDH-202ENST00000421816 TONSLQ96HA7 1378 aa27.87■■■□□ 2.05
GCDH-202ENST00000421816 MSH6P52701 1360 aa27.86■■■□□ 2.05
GCDH-202ENST00000421816 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.85■■■□□ 2.05
GCDH-202ENST00000421816 TOM1O60784 492 aa27.85■■■□□ 2.05
GCDH-202ENST00000421816 STK26Q9P289 416 aa27.85■■■□□ 2.05
GCDH-202ENST00000421816 NALCNQ8IZF0 1738 aa27.84■■■□□ 2.05
GCDH-202ENST00000421816 CCER1Q8TC90 406 aaPredicted RBP27.83■■■□□ 2.05
GCDH-202ENST00000421816 DLC1Q96QB1 1528 aa27.82■■■□□ 2.04
GCDH-202ENST00000421816 TRPM1Q7Z4N2 1603 aa27.82■■■□□ 2.04
GCDH-202ENST00000421816 ILDR1Q86SU0 546 aaPredicted RBP27.82■■■□□ 2.04
GCDH-202ENST00000421816 SIRT1Q96EB6 747 aa27.82■■■□□ 2.04
GCDH-202ENST00000421816 C19orf44Q9H6X5 657 aa27.82■■■□□ 2.04
GCDH-202ENST00000421816 ADGRL3Q9HAR2 1447 aa27.82■■■□□ 2.04
GCDH-202ENST00000421816 FAM135BQ49AJ0 1406 aa27.81■■■□□ 2.04
GCDH-202ENST00000421816 C14orf37Q86TY3 774 aa27.8■■■□□ 2.04
GCDH-202ENST00000421816 DCCP43146 1447 aa27.79■■■□□ 2.04
GCDH-202ENST00000421816 NBPF1Q3BBV0 1214 aa27.77■■■□□ 2.04
GCDH-202ENST00000421816 PLEKHH1Q9ULM0 1364 aa27.76■■■□□ 2.03
GCDH-202ENST00000421816 NBPF8Q3BBV2 869 aa27.76■■■□□ 2.03
GCDH-202ENST00000421816 WAPLQ7Z5K2 1190 aa27.76■■■□□ 2.03
GCDH-202ENST00000421816 ARHGEF28Q8N1W1 1705 aaKnown RBP27.75■■■□□ 2.03
GCDH-202ENST00000421816 CADPS2Q86UW7 1296 aa27.74■■■□□ 2.03
GCDH-202ENST00000421816 TIMELESSQ9UNS1 1208 aa27.74■■■□□ 2.03
GCDH-202ENST00000421816 TRAK1Q9UPV9 953 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms