RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 HSPA2P54652 639 aa17.07■□□□□ 0.32
CAST-208ENST00000421689 RIMS2Q9UQ26 1411 aa17.06■□□□□ 0.32
CAST-208ENST00000421689 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.06■□□□□ 0.32
CAST-208ENST00000421689 PPLO60437 1756 aa17.06■□□□□ 0.32
CAST-208ENST00000421689 NEXMIFQ5QGS0 1516 aa17.06■□□□□ 0.32
CAST-208ENST00000421689 IFT172Q9UG01 1749 aa17.05■□□□□ 0.32
CAST-208ENST00000421689 EID1Q9Y6B2 187 aa17.05■□□□□ 0.32
CAST-208ENST00000421689 ZFYVE9O95405 1425 aa17.04■□□□□ 0.32
CAST-208ENST00000421689 TXNDC2Q86VQ3 553 aa17.04■□□□□ 0.32
CAST-208ENST00000421689 ANKLE2Q86XL3 938 aa17.04■□□□□ 0.32
CAST-208ENST00000421689 TONSLQ96HA7 1378 aa17.03■□□□□ 0.32
CAST-208ENST00000421689 POLR1AO95602 1720 aaPredicted RBP17.03■□□□□ 0.32
CAST-208ENST00000421689 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.32
CAST-208ENST00000421689 STAC3Q96MF2 364 aa17.02■□□□□ 0.32
CAST-208ENST00000421689 TIMELESSQ9UNS1 1208 aa17.02■□□□□ 0.32
CAST-208ENST00000421689 SCAF11Q99590 1463 aaKnown RBP17.01■□□□□ 0.31
CAST-208ENST00000421689 PPP1R15AO75807 674 aaPredicted RBP17.01■□□□□ 0.31
CAST-208ENST00000421689 LTKP29376 864 aa17.01■□□□□ 0.31
CAST-208ENST00000421689 DCAF11Q8TEB1 546 aa17.01■□□□□ 0.31
CAST-208ENST00000421689 L3MBTL2Q969R5 705 aa17.01■□□□□ 0.31
CAST-208ENST00000421689 NUTM2DQ5VT03 806 aaPredicted RBP17■□□□□ 0.31
CAST-208ENST00000421689 STRCQ7RTU9 1775 aa17■□□□□ 0.31
CAST-208ENST00000421689 MYOM2P54296 1465 aa16.99■□□□□ 0.31
CAST-208ENST00000421689 NCKAP5LQ9HCH0 1330 aa16.98■□□□□ 0.31
CAST-208ENST00000421689 KDM2AQ9Y2K7 1162 aa16.98■□□□□ 0.31
CAST-208ENST00000421689 PLEKHG1Q9ULL1 1385 aa16.97■□□□□ 0.31
CAST-208ENST00000421689 MED14O60244 1454 aa16.97■□□□□ 0.31
CAST-208ENST00000421689 NPHP4O75161 1426 aaPredicted RBP16.96■□□□□ 0.3
CAST-208ENST00000421689 ADGRF5Q8IZF2 1346 aa16.96■□□□□ 0.3
CAST-208ENST00000421689 IQGAP1P46940 1657 aa16.94■□□□□ 0.3
CAST-208ENST00000421689 NRXN1Q9ULB1 1477 aa16.94■□□□□ 0.3
CAST-208ENST00000421689 BCANQ96GW7 911 aa16.94■□□□□ 0.3
CAST-208ENST00000421689 DMRT2Q9Y5R5 561 aa16.93■□□□□ 0.3
CAST-208ENST00000421689 SETBP1Q9Y6X0 1596 aa16.93■□□□□ 0.3
CAST-208ENST00000421689 PIK3C2GO75747 1445 aa16.92■□□□□ 0.3
CAST-208ENST00000421689 NRXN3Q9Y4C0 1643 aa16.92■□□□□ 0.3
CAST-208ENST00000421689 PRAG1Q86YV5 1406 aa16.9■□□□□ 0.3
CAST-208ENST00000421689 DIP2AQ14689 1571 aa16.89■□□□□ 0.3
CAST-208ENST00000421689 ALKQ9UM73 1620 aa16.89■□□□□ 0.29
CAST-208ENST00000421689 TBX22Q9Y458 520 aa16.89■□□□□ 0.29
CAST-208ENST00000421689 LAMC1P11047 1609 aa16.88■□□□□ 0.29
CAST-208ENST00000421689 ADAMTS13Q76LX8 1427 aa16.88■□□□□ 0.29
CAST-208ENST00000421689 KIAA1210Q9ULL0 1709 aa16.88■□□□□ 0.29
CAST-208ENST00000421689 SLC26A8Q96RN1 970 aa16.88■□□□□ 0.29
CAST-208ENST00000421689 C14orf93Q9H972 538 aaKnown RBP16.88■□□□□ 0.29
CAST-208ENST00000421689 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
CAST-208ENST00000421689 NBPF8Q3BBV2 869 aa16.86■□□□□ 0.29
CAST-208ENST00000421689 CFAP70Q5T0N1 1121 aa16.86■□□□□ 0.29
CAST-208ENST00000421689 TRPM1Q7Z4N2 1603 aa16.85■□□□□ 0.29
CAST-208ENST00000421689 ZEB1P37275 1124 aaPredicted RBP16.83■□□□□ 0.28
CAST-208ENST00000421689 PIK3R4Q99570 1358 aa16.83■□□□□ 0.28
CAST-208ENST00000421689 METP08581 1390 aa16.82■□□□□ 0.28
CAST-208ENST00000421689 CHD2O14647 1828 aaKnown RBP16.82■□□□□ 0.28
CAST-208ENST00000421689 TMEM132EQ6IEE7 984 aa16.8■□□□□ 0.28
CAST-208ENST00000421689 ASXL1Q8IXJ9 1541 aa16.8■□□□□ 0.28
CAST-208ENST00000421689 RALGAPBQ86X10 1494 aa16.8■□□□□ 0.28
CAST-208ENST00000421689 NBPF1Q3BBV0 1214 aa16.79■□□□□ 0.28
CAST-208ENST00000421689 ADGRB1O14514 1584 aa16.79■□□□□ 0.28
CAST-208ENST00000421689 ROCK2O75116 1388 aaKnown RBP16.78■□□□□ 0.28
CAST-208ENST00000421689 KCNA6P17658 529 aa16.78■□□□□ 0.28
CAST-208ENST00000421689 AMOTL2Q9Y2J4 779 aa16.77■□□□□ 0.28
CAST-208ENST00000421689 PTPRUQ92729 1446 aa16.77■□□□□ 0.27
CAST-208ENST00000421689 YTHDC2Q9H6S0 1430 aaKnown RBP16.77■□□□□ 0.27
CAST-208ENST00000421689 NWD1Q149M9 1564 aa16.77■□□□□ 0.27
CAST-208ENST00000421689 LRPPRCP42704 1394 aaKnown RBP16.77■□□□□ 0.27
CAST-208ENST00000421689 GPRASP1Q5JY77 1395 aa16.77■□□□□ 0.27
CAST-208ENST00000421689 XRN1Q8IZH2 1706 aaKnown RBP16.76■□□□□ 0.27
CAST-208ENST00000421689 STRCP1A6NGW2 1772 aa16.75■□□□□ 0.27
CAST-208ENST00000421689 KNDC1Q76NI1 1749 aa16.75■□□□□ 0.27
CAST-208ENST00000421689 ABCC11Q96J66 1382 aa16.75■□□□□ 0.27
CAST-208ENST00000421689 CARD11Q9BXL7 1154 aa16.74■□□□□ 0.27
CAST-208ENST00000421689 STK26Q9P289 416 aa16.74■□□□□ 0.27
CAST-208ENST00000421689 ZNF335Q9H4Z2 1342 aaPredicted RBP16.73■□□□□ 0.27
CAST-208ENST00000421689 TECPR2O15040 1411 aa16.72■□□□□ 0.27
CAST-208ENST00000421689 TRAK1Q9UPV9 953 aa16.72■□□□□ 0.27
CAST-208ENST00000421689 NKTRP30414 1462 aaKnown RBP16.72■□□□□ 0.27
CAST-208ENST00000421689 CPS1P31327 1500 aa16.71■□□□□ 0.27
CAST-208ENST00000421689 DLC1Q96QB1 1528 aa16.71■□□□□ 0.27
CAST-208ENST00000421689 SIRT1Q96EB6 747 aa16.71■□□□□ 0.27
CAST-208ENST00000421689 ARHGEF28Q8N1W1 1705 aaKnown RBP16.7■□□□□ 0.26
CAST-208ENST00000421689 PTCH1Q13635 1447 aa16.7■□□□□ 0.26
CAST-208ENST00000421689 LTBP4Q8N2S1 1624 aa16.68■□□□□ 0.26
CAST-208ENST00000421689 PROSER2Q86WR7 435 aaPredicted RBP16.68■□□□□ 0.26
CAST-208ENST00000421689 FAM135BQ49AJ0 1406 aa16.68■□□□□ 0.26
CAST-208ENST00000421689 EIF3AQ14152 1382 aaKnown RBP16.67■□□□□ 0.26
CAST-208ENST00000421689 ROBO2Q9HCK4 1378 aa16.67■□□□□ 0.26
CAST-208ENST00000421689 POGKQ9P215 609 aa16.66■□□□□ 0.26
CAST-208ENST00000421689 WAPLQ7Z5K2 1190 aa16.65■□□□□ 0.26
CAST-208ENST00000421689 PRAM1Q96QH2 718 aa16.65■□□□□ 0.26
CAST-208ENST00000421689 LRRC7Q96NW7 1537 aa16.65■□□□□ 0.26
CAST-208ENST00000421689 NCOA3Q9Y6Q9 1424 aa16.64■□□□□ 0.25
CAST-208ENST00000421689 USP47Q96K76 1375 aa16.64■□□□□ 0.25
CAST-208ENST00000421689 PLEKHH1Q9ULM0 1364 aa16.64■□□□□ 0.25
CAST-208ENST00000421689 XIRP1Q702N8 1843 aaKnown RBP16.63■□□□□ 0.25
CAST-208ENST00000421689 CENPJQ9HC77 1338 aaPredicted RBP16.63■□□□□ 0.25
CAST-208ENST00000421689 TMEM94Q12767 1356 aa16.63■□□□□ 0.25
CAST-208ENST00000421689 EIF4G2P78344 907 aaKnown RBP eCLIP16.62■□□□□ 0.25
CAST-208ENST00000421689 RBM33Q96EV2 1170 aaKnown RBP16.62■□□□□ 0.25
CAST-208ENST00000421689 QRICH2Q9H0J4 1663 aa16.62■□□□□ 0.25
CAST-208ENST00000421689 SAFB2Q14151 953 aaKnown RBP eCLIP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms