RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 MYO5BQ9ULV0 1848 aa25.22■■□□□ 1.63
PPFIA3-202ENST00000421230 EIF4G2P78344 907 aaKnown RBP eCLIP25.22■■□□□ 1.634e-8■■■■■ 37.9
PPFIA3-202ENST00000421230 MADDQ8WXG6 1647 aa25.21■■□□□ 1.63
PPFIA3-202ENST00000421230 NBPF1Q3BBV0 1214 aa25.21■■□□□ 1.63
PPFIA3-202ENST00000421230 TMEM131LA2VDJ0 1609 aa25.2■■□□□ 1.62
PPFIA3-202ENST00000421230 ADGRF5Q8IZF2 1346 aa25.2■■□□□ 1.62
PPFIA3-202ENST00000421230 ROCK2O75116 1388 aaKnown RBP25.2■■□□□ 1.62
PPFIA3-202ENST00000421230 BCANQ96GW7 911 aa25.2■■□□□ 1.62
PPFIA3-202ENST00000421230 CARD11Q9BXL7 1154 aa25.2■■□□□ 1.62
PPFIA3-202ENST00000421230 C3P01024 1663 aa25.19■■□□□ 1.62
PPFIA3-202ENST00000421230 CCER2I3L3R5 266 aa25.19■■□□□ 1.62
PPFIA3-202ENST00000421230 NUTM2DQ5VT03 806 aaPredicted RBP25.18■■□□□ 1.62
PPFIA3-202ENST00000421230 STAC3Q96MF2 364 aa25.18■■□□□ 1.62
PPFIA3-202ENST00000421230 STAG3Q9UJ98 1225 aa25.18■■□□□ 1.62
PPFIA3-202ENST00000421230 PPLO60437 1756 aa25.18■■□□□ 1.62
PPFIA3-202ENST00000421230 TNRQ92752 1358 aa25.17■■□□□ 1.62
PPFIA3-202ENST00000421230 MYOM2P54296 1465 aa25.16■■□□□ 1.62
PPFIA3-202ENST00000421230 RPGRIP1LQ68CZ1 1315 aa25.16■■□□□ 1.62
PPFIA3-202ENST00000421230 USP47Q96K76 1375 aa25.14■■□□□ 1.61
PPFIA3-202ENST00000421230 NEXMIFQ5QGS0 1516 aa25.13■■□□□ 1.61
PPFIA3-202ENST00000421230 RIMS1Q86UR5 1692 aaKnown RBP25.13■■□□□ 1.61
PPFIA3-202ENST00000421230 ADAMTSL3P82987 1691 aa25.11■■□□□ 1.61
PPFIA3-202ENST00000421230 CFAP70Q5T0N1 1121 aa25.1■■□□□ 1.61
PPFIA3-202ENST00000421230 A2ML1A8K2U0 1454 aa25.1■■□□□ 1.61
PPFIA3-202ENST00000421230 NRXN1Q9ULB1 1477 aa25.1■■□□□ 1.61
PPFIA3-202ENST00000421230 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
PPFIA3-202ENST00000421230 GPRASP1Q5JY77 1395 aa25.09■■□□□ 1.61
PPFIA3-202ENST00000421230 VGFO15240 615 aaPredicted RBP25.08■■□□□ 1.6
PPFIA3-202ENST00000421230 NEFLP07196 543 aa25.08■■□□□ 1.6
PPFIA3-202ENST00000421230 RBM19Q9Y4C8 960 aaKnown RBP25.05■■□□□ 1.6
PPFIA3-202ENST00000421230 PIK3C2GO75747 1445 aa25.05■■□□□ 1.6
PPFIA3-202ENST00000421230 ANP32CO43423 234 aa25.05■■□□□ 1.6
PPFIA3-202ENST00000421230 KIAA1210Q9ULL0 1709 aa25.04■■□□□ 1.6
PPFIA3-202ENST00000421230 LAMC1P11047 1609 aa25.03■■□□□ 1.6
PPFIA3-202ENST00000421230 ST20-MTHFSA0A0A6YYL1 179 aa25.03■■□□□ 1.6
PPFIA3-202ENST00000421230 C11orf95C9JLR9 678 aaPredicted RBP25.02■■□□□ 1.6
PPFIA3-202ENST00000421230 UBR1Q8IWV7 1749 aa25.01■■□□□ 1.59
PPFIA3-202ENST00000421230 NLRP1Q9C000 1473 aa25.01■■□□□ 1.59
PPFIA3-202ENST00000421230 RIMS2Q9UQ26 1411 aa25.01■■□□□ 1.59
PPFIA3-202ENST00000421230 C14orf93Q9H972 538 aaKnown RBP25■■□□□ 1.59
PPFIA3-202ENST00000421230 ZFYVE9O95405 1425 aa25■■□□□ 1.59
PPFIA3-202ENST00000421230 WASHC2AQ641Q2 1341 aa24.99■■□□□ 1.59
PPFIA3-202ENST00000421230 KDM5AP29375 1690 aaKnown RBP24.96■■□□□ 1.59
PPFIA3-202ENST00000421230 TMEM132EQ6IEE7 984 aa24.96■■□□□ 1.59
PPFIA3-202ENST00000421230 IQGAP1P46940 1657 aa24.95■■□□□ 1.59
PPFIA3-202ENST00000421230 MYO3AQ8NEV4 1616 aa24.95■■□□□ 1.58
PPFIA3-202ENST00000421230 SCAF11Q99590 1463 aaKnown RBP24.94■■□□□ 1.58
PPFIA3-202ENST00000421230 TMEM2Q9UHN6 1383 aa24.93■■□□□ 1.58
PPFIA3-202ENST00000421230 CCDC7Q96M83 1385 aa24.92■■□□□ 1.58
PPFIA3-202ENST00000421230 SETBP1Q9Y6X0 1596 aa24.92■■□□□ 1.58
PPFIA3-202ENST00000421230 KIF7Q2M1P5 1343 aa24.91■■□□□ 1.58
PPFIA3-202ENST00000421230 ADGRB1O14514 1584 aa24.91■■□□□ 1.58
PPFIA3-202ENST00000421230 PTPRMP28827 1452 aa24.91■■□□□ 1.58
PPFIA3-202ENST00000421230 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.9■■□□□ 1.58
PPFIA3-202ENST00000421230 BCL11AQ9H165 835 aa24.89■■□□□ 1.58
PPFIA3-202ENST00000421230 POLR3GLQ9BT43 218 aa24.89■■□□□ 1.57
PPFIA3-202ENST00000421230 POLR1AO95602 1720 aaPredicted RBP24.88■■□□□ 1.57
PPFIA3-202ENST00000421230 HDGFP51858 240 aaKnown RBP24.88■■□□□ 1.57
PPFIA3-202ENST00000421230 TESK2Q96S53 571 aa24.88■■□□□ 1.57
PPFIA3-202ENST00000421230 TRAK1Q9UPV9 953 aa24.88■■□□□ 1.57
PPFIA3-202ENST00000421230 CEP170BQ9Y4F5 1589 aaPredicted RBP24.86■■□□□ 1.57
PPFIA3-202ENST00000421230 LTKP29376 864 aa24.86■■□□□ 1.57
PPFIA3-202ENST00000421230 ALKQ9UM73 1620 aa24.86■■□□□ 1.57
PPFIA3-202ENST00000421230 THEMISQ8N1K5 641 aaPredicted RBP24.86■■□□□ 1.57
PPFIA3-202ENST00000421230 ASXL1Q8IXJ9 1541 aa24.85■■□□□ 1.57
PPFIA3-202ENST00000421230 EIF3AQ14152 1382 aaKnown RBP24.84■■□□□ 1.57
PPFIA3-202ENST00000421230 TXNDC2Q86VQ3 553 aa24.84■■□□□ 1.57
PPFIA3-202ENST00000421230 SETD1BQ9UPS6 1966 aaKnown RBP24.84■■□□□ 1.57
PPFIA3-202ENST00000421230 STK26Q9P289 416 aa24.82■■□□□ 1.56
PPFIA3-202ENST00000421230 NRXN3Q9Y4C0 1643 aa24.82■■□□□ 1.56
PPFIA3-202ENST00000421230 SLIT1O75093 1534 aa24.81■■□□□ 1.56
PPFIA3-202ENST00000421230 DISP3Q9P2K9 1392 aa24.81■■□□□ 1.56
PPFIA3-202ENST00000421230 EID1Q9Y6B2 187 aa24.81■■□□□ 1.56
PPFIA3-202ENST00000421230 ARHGAP23Q9P227 1491 aa24.81■■□□□ 1.56
PPFIA3-202ENST00000421230 SETD1AO15047 1707 aaKnown RBP24.78■■□□□ 1.56
PPFIA3-202ENST00000421230 ZNF142P52746 1687 aaPredicted RBP24.78■■□□□ 1.56
PPFIA3-202ENST00000421230 TMF1P82094 1093 aa24.77■■□□□ 1.56
PPFIA3-202ENST00000421230 MSH5O43196 834 aa24.77■■□□□ 1.56
PPFIA3-202ENST00000421230 KDM4FA0A1W2PPD8 638 aa24.76■■□□□ 1.55
PPFIA3-202ENST00000421230 YTHDC2Q9H6S0 1430 aaKnown RBP24.76■■□□□ 1.55
PPFIA3-202ENST00000421230 CENPJQ9HC77 1338 aaPredicted RBP24.76■■□□□ 1.55
PPFIA3-202ENST00000421230 PLEKHG1Q9ULL1 1385 aa24.76■■□□□ 1.55
PPFIA3-202ENST00000421230 METP08581 1390 aa24.75■■□□□ 1.55
PPFIA3-202ENST00000421230 ARHGEF28Q8N1W1 1705 aaKnown RBP24.74■■□□□ 1.55
PPFIA3-202ENST00000421230 FANCIQ9NVI1 1328 aa24.74■■□□□ 1.55
PPFIA3-202ENST00000421230 ADAMTS13Q76LX8 1427 aa24.72■■□□□ 1.55
PPFIA3-202ENST00000421230 SAFB2Q14151 953 aaKnown RBP eCLIP24.71■■□□□ 1.55
PPFIA3-202ENST00000421230 SLC26A8Q96RN1 970 aa24.71■■□□□ 1.55
PPFIA3-202ENST00000421230 QRICH2Q9H0J4 1663 aa24.71■■□□□ 1.55
PPFIA3-202ENST00000421230 HNRNPUQ00839 825 aaKnown RBP eCLIP24.69■■□□□ 1.54
PPFIA3-202ENST00000421230 LRPPRCP42704 1394 aaKnown RBP24.68■■□□□ 1.54
PPFIA3-202ENST00000421230 ERICH6BQ5W0A0 696 aa24.67■■□□□ 1.54
PPFIA3-202ENST00000421230 PRAM1Q96QH2 718 aa24.67■■□□□ 1.54
PPFIA3-202ENST00000421230 ANKLE2Q86XL3 938 aa24.66■■□□□ 1.54
PPFIA3-202ENST00000421230 SBNO2Q9Y2G9 1366 aa24.66■■□□□ 1.54
PPFIA3-202ENST00000421230 POGKQ9P215 609 aa24.65■■□□□ 1.54
PPFIA3-202ENST00000421230 MED14O60244 1454 aa24.64■■□□□ 1.54
PPFIA3-202ENST00000421230 WAPLQ7Z5K2 1190 aa24.63■■□□□ 1.53
PPFIA3-202ENST00000421230 ABCC11Q96J66 1382 aa24.63■■□□□ 1.53
PPFIA3-202ENST00000421230 CDCA8Q53HL2 280 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms