RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 MYO5BQ9ULV0 1848 aa26.11■■□□□ 1.77
UPF3AP3-201ENST00000420996 BCANQ96GW7 911 aa26.11■■□□□ 1.77
UPF3AP3-201ENST00000420996 RBM33Q96EV2 1170 aaKnown RBP26.1■■□□□ 1.77
UPF3AP3-201ENST00000420996 ZFYVE9O95405 1425 aa26.1■■□□□ 1.77
UPF3AP3-201ENST00000420996 ROBO1Q9Y6N7 1651 aa26.09■■□□□ 1.77
UPF3AP3-201ENST00000420996 HDGFP51858 240 aaKnown RBP26.09■■□□□ 1.77
UPF3AP3-201ENST00000420996 RGS17Q9UGC6 210 aaPredicted RBP26.09■■□□□ 1.77
UPF3AP3-201ENST00000420996 GCC2Q8IWJ2 1684 aa26.09■■□□□ 1.77
UPF3AP3-201ENST00000420996 PLEKHG1Q9ULL1 1385 aa26.07■■□□□ 1.76
UPF3AP3-201ENST00000420996 TMEM131LA2VDJ0 1609 aa26.07■■□□□ 1.76
UPF3AP3-201ENST00000420996 CHD2O14647 1828 aaKnown RBP26.07■■□□□ 1.76
UPF3AP3-201ENST00000420996 UNC13BO14795 1591 aa26.06■■□□□ 1.76
UPF3AP3-201ENST00000420996 MSH6P52701 1360 aa26.06■■□□□ 1.76
UPF3AP3-201ENST00000420996 RIMS2Q9UQ26 1411 aa26.05■■□□□ 1.76
UPF3AP3-201ENST00000420996 PPP1R15AO75807 674 aaPredicted RBP26.03■■□□□ 1.76
UPF3AP3-201ENST00000420996 SLAIN2Q9P270 581 aa26.01■■□□□ 1.75
UPF3AP3-201ENST00000420996 TBX22Q9Y458 520 aa26.01■■□□□ 1.75
UPF3AP3-201ENST00000420996 E9PCH4 1651 aa26■■□□□ 1.75
UPF3AP3-201ENST00000420996 ABCF1Q8NE71 845 aaKnown RBP eCLIP26■■□□□ 1.75
UPF3AP3-201ENST00000420996 ROCK1Q13464 1354 aa25.99■■□□□ 1.75
UPF3AP3-201ENST00000420996 CHGAP10645 457 aaKnown RBP25.98■■□□□ 1.75
UPF3AP3-201ENST00000420996 IQGAP3Q86VI3 1631 aa25.96■■□□□ 1.75
UPF3AP3-201ENST00000420996 NCOA3Q9Y6Q9 1424 aa25.96■■□□□ 1.75
UPF3AP3-201ENST00000420996 PHLPP1O60346 1717 aa25.95■■□□□ 1.74
UPF3AP3-201ENST00000420996 DIP2AQ14689 1571 aa25.92■■□□□ 1.74
UPF3AP3-201ENST00000420996 ADAMTS13Q76LX8 1427 aa25.92■■□□□ 1.74
UPF3AP3-201ENST00000420996 POTEAQ6S8J7 498 aa25.92■■□□□ 1.74
UPF3AP3-201ENST00000420996 PIK3R4Q99570 1358 aa25.91■■□□□ 1.74
UPF3AP3-201ENST00000420996 NUTM2DQ5VT03 806 aaPredicted RBP25.9■■□□□ 1.74
UPF3AP3-201ENST00000420996 NUP155O75694 1391 aa25.9■■□□□ 1.74
UPF3AP3-201ENST00000420996 JCADQ9P266 1359 aa25.89■■□□□ 1.74
UPF3AP3-201ENST00000420996 C14orf37Q86TY3 774 aa25.87■■□□□ 1.73
UPF3AP3-201ENST00000420996 C19orf44Q9H6X5 657 aa25.86■■□□□ 1.73
UPF3AP3-201ENST00000420996 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.85■■□□□ 1.73
UPF3AP3-201ENST00000420996 COL16A1Q07092 1604 aaPredicted RBP25.85■■□□□ 1.73
UPF3AP3-201ENST00000420996 CADPS2Q86UW7 1296 aa25.85■■□□□ 1.73
UPF3AP3-201ENST00000420996 TRPM2O94759 1503 aa25.83■■□□□ 1.73
UPF3AP3-201ENST00000420996 ITGAEP38570 1179 aa25.83■■□□□ 1.73
UPF3AP3-201ENST00000420996 ATF3P18847 181 aa25.82■■□□□ 1.72
UPF3AP3-201ENST00000420996 AMOTL2Q9Y2J4 779 aa25.81■■□□□ 1.72
UPF3AP3-201ENST00000420996 PTPRUQ92729 1446 aa25.79■■□□□ 1.72
UPF3AP3-201ENST00000420996 AHDC1Q5TGY3 1603 aaPredicted RBP25.78■■□□□ 1.72
UPF3AP3-201ENST00000420996 SPHKAPQ2M3C7 1700 aa25.78■■□□□ 1.72
UPF3AP3-201ENST00000420996 SPATA31A6Q5VVP1 1343 aa25.78■■□□□ 1.72
UPF3AP3-201ENST00000420996 NRXN3Q9Y4C0 1643 aa25.74■■□□□ 1.71
UPF3AP3-201ENST00000420996 SETBP1Q9Y6X0 1596 aa25.74■■□□□ 1.71
UPF3AP3-201ENST00000420996 SHPRHQ149N8 1683 aa25.74■■□□□ 1.71
UPF3AP3-201ENST00000420996 LRP6O75581 1613 aa25.73■■□□□ 1.71
UPF3AP3-201ENST00000420996 DCCP43146 1447 aa25.72■■□□□ 1.71
UPF3AP3-201ENST00000420996 XRN1Q8IZH2 1706 aaKnown RBP25.72■■□□□ 1.71
UPF3AP3-201ENST00000420996 PPARGC1BQ86YN6 1023 aaKnown RBP25.72■■□□□ 1.71
UPF3AP3-201ENST00000420996 ZNF326Q5BKZ1 582 aaKnown RBP25.71■■□□□ 1.71
UPF3AP3-201ENST00000420996 BRINP3Q76B58 766 aa25.71■■□□□ 1.71
UPF3AP3-201ENST00000420996 SETD1AO15047 1707 aaKnown RBP25.69■■□□□ 1.7
UPF3AP3-201ENST00000420996 MEX3CQ5U5Q3 659 aaKnown RBP25.69■■□□□ 1.7
UPF3AP3-201ENST00000420996 ZNF772Q68DY9 489 aaPredicted RBP25.67■■□□□ 1.7
UPF3AP3-201ENST00000420996 METP08581 1390 aa25.66■■□□□ 1.7
UPF3AP3-201ENST00000420996 CLTCL1P53675 1640 aa25.64■■□□□ 1.7
UPF3AP3-201ENST00000420996 MST1RQ04912 1400 aa25.63■■□□□ 1.69
UPF3AP3-201ENST00000420996 ASXL1Q8IXJ9 1541 aa25.63■■□□□ 1.69
UPF3AP3-201ENST00000420996 NEXMIFQ5QGS0 1516 aa25.63■■□□□ 1.69
UPF3AP3-201ENST00000420996 KIF1BO60333 1816 aa25.61■■□□□ 1.69
UPF3AP3-201ENST00000420996 NHSL1Q5SYE7 1610 aa25.61■■□□□ 1.69
UPF3AP3-201ENST00000420996 SETD5Q9C0A6 1442 aa25.61■■□□□ 1.69
UPF3AP3-201ENST00000420996 ADGRL3Q9HAR2 1447 aa25.59■■□□□ 1.69
UPF3AP3-201ENST00000420996 NAIPQ13075 1403 aa25.58■■□□□ 1.69
UPF3AP3-201ENST00000420996 RRBP1Q9P2E9 1410 aaKnown RBP25.58■■□□□ 1.69
UPF3AP3-201ENST00000420996 NUTM2BA6NNL0 878 aaPredicted RBP25.58■■□□□ 1.69
UPF3AP3-201ENST00000420996 NUTM2EB1AL46 878 aaPredicted RBP25.58■■□□□ 1.69
UPF3AP3-201ENST00000420996 NUTM2AQ8IVF1 878 aaPredicted RBP25.58■■□□□ 1.69
UPF3AP3-201ENST00000420996 LRRC59Q96AG4 307 aaKnown RBP25.56■■□□□ 1.68
UPF3AP3-201ENST00000420996 NALCNQ8IZF0 1738 aa25.55■■□□□ 1.68
UPF3AP3-201ENST00000420996 TRIM52Q96A61 297 aa25.55■■□□□ 1.68
UPF3AP3-201ENST00000420996 RXRBP28702 533 aa25.54■■□□□ 1.68
UPF3AP3-201ENST00000420996 VGFO15240 615 aaPredicted RBP25.52■■□□□ 1.68
UPF3AP3-201ENST00000420996 UPF1Q92900 1129 aaKnown RBP eCLIP25.51■■□□□ 1.67
UPF3AP3-201ENST00000420996 AFF2P51816 1311 aa25.5■■□□□ 1.67
UPF3AP3-201ENST00000420996 CDK12Q9NYV4 1490 aaPredicted RBP25.49■■□□□ 1.67
UPF3AP3-201ENST00000420996 DDX17Q92841 729 aaKnown RBP25.49■■□□□ 1.67
UPF3AP3-201ENST00000420996 PTCH1Q13635 1447 aa25.48■■□□□ 1.67
UPF3AP3-201ENST00000420996 C1orf167Q5SNV9 1468 aa25.47■■□□□ 1.67
UPF3AP3-201ENST00000420996 PNPLA6Q8IY17 1366 aa25.47■■□□□ 1.67
UPF3AP3-201ENST00000420996 RPGRIP1LQ68CZ1 1315 aa25.47■■□□□ 1.67
UPF3AP3-201ENST00000420996 HFM1A2PYH4 1435 aa25.46■■□□□ 1.67
UPF3AP3-201ENST00000420996 LAMC1P11047 1609 aa25.45■■□□□ 1.66
UPF3AP3-201ENST00000420996 ROBO2Q9HCK4 1378 aa25.44■■□□□ 1.66
UPF3AP3-201ENST00000420996 PRAG1Q86YV5 1406 aa25.44■■□□□ 1.66
UPF3AP3-201ENST00000420996 C8orf37Q96NL8 207 aa25.43■■□□□ 1.66
UPF3AP3-201ENST00000420996 SLC4A1APQ9BWU0 796 aaKnown RBP25.43■■□□□ 1.66
UPF3AP3-201ENST00000420996 PPLO60437 1756 aa25.42■■□□□ 1.66
UPF3AP3-201ENST00000420996 QTRT2Q9H974 415 aaKnown RBP25.4■■□□□ 1.66
UPF3AP3-201ENST00000420996 SOS2Q07890 1332 aaPredicted RBP25.39■■□□□ 1.66
UPF3AP3-201ENST00000420996 ORAI2Q96SN7 254 aa25.39■■□□□ 1.66
UPF3AP3-201ENST00000420996 RBM6P78332 1123 aaKnown RBP25.38■■□□□ 1.65
UPF3AP3-201ENST00000420996 NGLY1Q96IV0 654 aa25.36■■□□□ 1.65
UPF3AP3-201ENST00000420996 ADAMTS2O95450 1211 aa25.35■■□□□ 1.65
UPF3AP3-201ENST00000420996 RGS12O14924 1447 aa25.33■■□□□ 1.65
UPF3AP3-201ENST00000420996 FOXD1Q16676 465 aa25.29■■□□□ 1.64
UPF3AP3-201ENST00000420996 CDC42BPGQ6DT37 1551 aa25.29■■□□□ 1.64
UPF3AP3-201ENST00000420996 COL22A1Q8NFW1 1626 aaPredicted RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms