RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 SCAF11Q99590 1463 aaKnown RBP11.8□□□□□ -0.52
TRIM49D1-201ENST00000420869 SIGLEC1Q9BZZ2 1709 aa11.8□□□□□ -0.52
TRIM49D1-201ENST00000420869 NLRP13Q86W25 1043 aa11.8□□□□□ -0.52
TRIM49D1-201ENST00000420869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRIM49D1-201ENST00000420869 CAMSAP1Q5T5Y3 1602 aa11.8□□□□□ -0.52
TRIM49D1-201ENST00000420869 SPAG9O60271 1321 aaKnown RBP11.79□□□□□ -0.52
TRIM49D1-201ENST00000420869 FRMPD1Q5SYB0 1578 aa11.79□□□□□ -0.52
TRIM49D1-201ENST00000420869 UGGT1Q9NYU2 1555 aa11.79□□□□□ -0.52
TRIM49D1-201ENST00000420869 NRXN1Q9ULB1 1477 aa11.78□□□□□ -0.52
TRIM49D1-201ENST00000420869 PIK3C2BO00750 1634 aa11.78□□□□□ -0.52
TRIM49D1-201ENST00000420869 RGL3Q3MIN7 710 aa11.78□□□□□ -0.52
TRIM49D1-201ENST00000420869 RICTORQ6R327 1708 aa11.78□□□□□ -0.52
TRIM49D1-201ENST00000420869 USP32Q8NFA0 1604 aa11.78□□□□□ -0.52
TRIM49D1-201ENST00000420869 ARHGEF28Q8N1W1 1705 aaKnown RBP11.78□□□□□ -0.52
TRIM49D1-201ENST00000420869 STAC3Q96MF2 364 aa11.78□□□□□ -0.52
TRIM49D1-201ENST00000420869 ASXL1Q8IXJ9 1541 aa11.77□□□□□ -0.52
TRIM49D1-201ENST00000420869 SHPRHQ149N8 1683 aa11.77□□□□□ -0.53
TRIM49D1-201ENST00000420869 ASXL2Q76L83 1435 aa11.76□□□□□ -0.53
TRIM49D1-201ENST00000420869 B4GALNT3Q6L9W6 998 aa11.75□□□□□ -0.53
TRIM49D1-201ENST00000420869 ZNF518AQ6AHZ1 1483 aa11.75□□□□□ -0.53
TRIM49D1-201ENST00000420869 TMF1P82094 1093 aa11.75□□□□□ -0.53
TRIM49D1-201ENST00000420869 KANK1Q14678 1352 aa11.75□□□□□ -0.53
TRIM49D1-201ENST00000420869 PDE3BQ13370 1112 aa11.74□□□□□ -0.53
TRIM49D1-201ENST00000420869 ANKRD26Q9UPS8 1709 aa11.74□□□□□ -0.53
TRIM49D1-201ENST00000420869 ERVK-7P63135 1459 aa11.73□□□□□ -0.53
TRIM49D1-201ENST00000420869 NPC1L1Q9UHC9 1359 aa11.73□□□□□ -0.53
TRIM49D1-201ENST00000420869 MSH5O43196 834 aa11.73□□□□□ -0.53
TRIM49D1-201ENST00000420869 CNGB1Q14028 1251 aaPredicted RBP11.73□□□□□ -0.53
TRIM49D1-201ENST00000420869 PIK3C2GO75747 1445 aa11.73□□□□□ -0.53
TRIM49D1-201ENST00000420869 AFAP1Q8N556 730 aa11.72□□□□□ -0.53
TRIM49D1-201ENST00000420869 MLH3Q9UHC1 1453 aa11.71□□□□□ -0.53
TRIM49D1-201ENST00000420869 EIF3AQ14152 1382 aaKnown RBP11.71□□□□□ -0.53
TRIM49D1-201ENST00000420869 POGZQ7Z3K3 1410 aa11.71□□□□□ -0.54
TRIM49D1-201ENST00000420869 PANK3Q9H999 370 aa11.71□□□□□ -0.54
TRIM49D1-201ENST00000420869 DIP2CQ9Y2E4 1556 aa11.7□□□□□ -0.54
TRIM49D1-201ENST00000420869 SBNO2Q9Y2G9 1366 aa11.7□□□□□ -0.54
TRIM49D1-201ENST00000420869 ADGRB1O14514 1584 aa11.7□□□□□ -0.54
TRIM49D1-201ENST00000420869 RRP1P56182 461 aaKnown RBP11.69□□□□□ -0.54
TRIM49D1-201ENST00000420869 ABCC3O15438 1527 aa11.69□□□□□ -0.54
TRIM49D1-201ENST00000420869 GLI2P10070 1586 aa11.69□□□□□ -0.54
TRIM49D1-201ENST00000420869 PREX1Q8TCU6 1659 aa11.69□□□□□ -0.54
TRIM49D1-201ENST00000420869 CLTCQ00610 1675 aaKnown RBP11.67□□□□□ -0.54
TRIM49D1-201ENST00000420869 CDCA8Q53HL2 280 aa11.66□□□□□ -0.54
TRIM49D1-201ENST00000420869 AMER1Q5JTC6 1135 aaPredicted RBP11.66□□□□□ -0.54
TRIM49D1-201ENST00000420869 CC2D1BQ5T0F9 858 aaKnown RBP11.66□□□□□ -0.54
TRIM49D1-201ENST00000420869 NEXMIFQ5QGS0 1516 aa11.66□□□□□ -0.54
TRIM49D1-201ENST00000420869 CCDC136Q96JN2 1154 aa11.65□□□□□ -0.54
TRIM49D1-201ENST00000420869 RCAN3Q9UKA8 241 aa11.65□□□□□ -0.54
TRIM49D1-201ENST00000420869 NEO1Q92859 1461 aa11.65□□□□□ -0.55
TRIM49D1-201ENST00000420869 KIF20BQ96Q89 1820 aa11.64□□□□□ -0.55
TRIM49D1-201ENST00000420869 NPATQ14207 1427 aa11.64□□□□□ -0.55
TRIM49D1-201ENST00000420869 KIF3BO15066 747 aa11.64□□□□□ -0.55
TRIM49D1-201ENST00000420869 SENP3-EIF4A1A0A087X0R7 540 aa11.63□□□□□ -0.55
TRIM49D1-201ENST00000420869 PPP2R1AP30153 589 aa11.63□□□□□ -0.55
TRIM49D1-201ENST00000420869 NOS1P29475 1434 aa11.62□□□□□ -0.55
TRIM49D1-201ENST00000420869 ZNF521Q96K83 1311 aa11.62□□□□□ -0.55
TRIM49D1-201ENST00000420869 PLEKHH1Q9ULM0 1364 aa11.61□□□□□ -0.55
TRIM49D1-201ENST00000420869 TMEM131LA2VDJ0 1609 aa11.61□□□□□ -0.55
TRIM49D1-201ENST00000420869 SLC24A1O60721 1099 aa11.61□□□□□ -0.55
TRIM49D1-201ENST00000420869 CDCA7LQ96GN5 454 aa11.61□□□□□ -0.55
TRIM49D1-201ENST00000420869 CD109Q6YHK3 1445 aa11.61□□□□□ -0.55
TRIM49D1-201ENST00000420869 ADGRF5Q8IZF2 1346 aa11.6□□□□□ -0.55
TRIM49D1-201ENST00000420869 SETD1AO15047 1707 aaKnown RBP11.6□□□□□ -0.55
TRIM49D1-201ENST00000420869 KNSTRNQ9Y448 316 aa11.6□□□□□ -0.55
TRIM49D1-201ENST00000420869 EXOC6Q8TAG9 804 aa11.59□□□□□ -0.55
TRIM49D1-201ENST00000420869 PHF23Q9BUL5 403 aaPredicted RBP11.59□□□□□ -0.55
TRIM49D1-201ENST00000420869 TULP4Q9NRJ4 1543 aa11.59□□□□□ -0.55
TRIM49D1-201ENST00000420869 ADGRB2O60241 1585 aa11.58□□□□□ -0.56
TRIM49D1-201ENST00000420869 ARHGAP31Q2M1Z3 1444 aa11.58□□□□□ -0.56
TRIM49D1-201ENST00000420869 ADAMTS8Q9UP79 889 aa11.58□□□□□ -0.56
TRIM49D1-201ENST00000420869 IQSEC2Q5JU85 1478 aa11.57□□□□□ -0.56
TRIM49D1-201ENST00000420869 CFAP70Q5T0N1 1121 aa11.57□□□□□ -0.56
TRIM49D1-201ENST00000420869 REREQ9P2R6 1566 aa11.56□□□□□ -0.56
TRIM49D1-201ENST00000420869 SALL2Q9Y467 1007 aaPredicted RBP11.55□□□□□ -0.56
TRIM49D1-201ENST00000420869 POLR3AO14802 1390 aaPredicted RBP11.55□□□□□ -0.56
TRIM49D1-201ENST00000420869 TSPOAP1O95153 1857 aa11.54□□□□□ -0.56
TRIM49D1-201ENST00000420869 TCERG1O14776 1098 aaKnown RBP11.54□□□□□ -0.56
TRIM49D1-201ENST00000420869 WDR43Q15061 677 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRIM49D1-201ENST00000420869 DUSP27Q5VZP5 1158 aa11.54□□□□□ -0.56
TRIM49D1-201ENST00000420869 TRMT2AQ8IZ69 625 aaKnown RBP11.54□□□□□ -0.56
TRIM49D1-201ENST00000420869 RPGRIP1LQ68CZ1 1315 aa11.54□□□□□ -0.56
TRIM49D1-201ENST00000420869 NKTRP30414 1462 aaKnown RBP11.53□□□□□ -0.56
TRIM49D1-201ENST00000420869 ZFYVE9O95405 1425 aa11.53□□□□□ -0.56
TRIM49D1-201ENST00000420869 CENPJQ9HC77 1338 aaPredicted RBP11.53□□□□□ -0.56
TRIM49D1-201ENST00000420869 MS4A1P11836 297 aa11.52□□□□□ -0.56
TRIM49D1-201ENST00000420869 MAP2P11137 1827 aaKnown RBP11.52□□□□□ -0.56
TRIM49D1-201ENST00000420869 RIMBP3CA6NJZ7 1639 aa11.52□□□□□ -0.57
TRIM49D1-201ENST00000420869 RIMBP3BA6NNM3 1639 aa11.52□□□□□ -0.57
TRIM49D1-201ENST00000420869 RIMBP3Q9UFD9 1639 aa11.52□□□□□ -0.57
TRIM49D1-201ENST00000420869 ERICH6Q7L0X2 663 aa11.52□□□□□ -0.57
TRIM49D1-201ENST00000420869 CARD14Q9BXL6 1004 aa11.52□□□□□ -0.57
TRIM49D1-201ENST00000420869 NSD3Q9BZ95 1437 aa11.52□□□□□ -0.57
TRIM49D1-201ENST00000420869 C14orf93Q9H972 538 aaKnown RBP11.52□□□□□ -0.57
TRIM49D1-201ENST00000420869 DIP2BQ9P265 1576 aa11.51□□□□□ -0.57
TRIM49D1-201ENST00000420869 NGEFQ8N5V2 710 aa11.51□□□□□ -0.57
TRIM49D1-201ENST00000420869 CRBNQ96SW2 442 aa11.51□□□□□ -0.57
TRIM49D1-201ENST00000420869 MYT1LQ9UL68 1186 aa11.51□□□□□ -0.57
TRIM49D1-201ENST00000420869 NOP58Q9Y2X3 529 aaKnown RBP11.51□□□□□ -0.57
TRIM49D1-201ENST00000420869 KNDC1Q76NI1 1749 aa11.51□□□□□ -0.57
TRIM49D1-201ENST00000420869 GOLGA2Q08379 1002 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms