RNA–Protein interactions for RNA: ENST00000420709.5

PRAME-207, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 2

Gene PRAME, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-207ENST00000420709 KCNA6P17658 529 aa19.78■□□□□ 0.76
PRAME-207ENST00000420709 ITGAEP38570 1179 aa19.78■□□□□ 0.76
PRAME-207ENST00000420709 E9PCH4 1651 aa19.77■□□□□ 0.76
PRAME-207ENST00000420709 PHF23Q9BUL5 403 aaPredicted RBP19.76■□□□□ 0.75
PRAME-207ENST00000420709 TMEM131LA2VDJ0 1609 aa19.76■□□□□ 0.75
PRAME-207ENST00000420709 ZFYVE9O95405 1425 aa19.76■□□□□ 0.75
PRAME-207ENST00000420709 RIMS2Q9UQ26 1411 aa19.76■□□□□ 0.75
PRAME-207ENST00000420709 ROCK1Q13464 1354 aa19.75■□□□□ 0.75
PRAME-207ENST00000420709 CHGAP10645 457 aaKnown RBP19.75■□□□□ 0.75
PRAME-207ENST00000420709 PROSER2Q86WR7 435 aaPredicted RBP19.75■□□□□ 0.75
PRAME-207ENST00000420709 NWD1Q149M9 1564 aa19.74■□□□□ 0.75
PRAME-207ENST00000420709 PPP1R15AO75807 674 aaPredicted RBP19.74■□□□□ 0.75
PRAME-207ENST00000420709 IQGAP3Q86VI3 1631 aa19.73■□□□□ 0.75
PRAME-207ENST00000420709 PLEKHG1Q9ULL1 1385 aa19.72■□□□□ 0.75
PRAME-207ENST00000420709 NKTRP30414 1462 aaKnown RBP19.72■□□□□ 0.75
PRAME-207ENST00000420709 NUTM2DQ5VT03 806 aaPredicted RBP19.71■□□□□ 0.75
PRAME-207ENST00000420709 NUP155O75694 1391 aa19.7■□□□□ 0.74
PRAME-207ENST00000420709 FAM135BQ49AJ0 1406 aa19.69■□□□□ 0.74
PRAME-207ENST00000420709 ROBO1Q9Y6N7 1651 aa19.69■□□□□ 0.74
PRAME-207ENST00000420709 CHD2O14647 1828 aaKnown RBP19.68■□□□□ 0.74
PRAME-207ENST00000420709 HDGFP51858 240 aaKnown RBP19.66■□□□□ 0.74
PRAME-207ENST00000420709 MSH6P52701 1360 aa19.66■□□□□ 0.74
PRAME-207ENST00000420709 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.64■□□□□ 0.73
PRAME-207ENST00000420709 ADAMTS13Q76LX8 1427 aa19.63■□□□□ 0.73
PRAME-207ENST00000420709 TBX22Q9Y458 520 aa19.62■□□□□ 0.73
PRAME-207ENST00000420709 RGS17Q9UGC6 210 aaPredicted RBP19.61■□□□□ 0.73
PRAME-207ENST00000420709 DIP2AQ14689 1571 aa19.6■□□□□ 0.73
PRAME-207ENST00000420709 SPHKAPQ2M3C7 1700 aa19.59■□□□□ 0.73
PRAME-207ENST00000420709 SLAIN2Q9P270 581 aa19.59■□□□□ 0.73
PRAME-207ENST00000420709 C14orf37Q86TY3 774 aa19.58■□□□□ 0.72
PRAME-207ENST00000420709 PHLPP1O60346 1717 aa19.58■□□□□ 0.72
PRAME-207ENST00000420709 PTPRUQ92729 1446 aa19.56■□□□□ 0.72
PRAME-207ENST00000420709 TRPM2O94759 1503 aa19.56■□□□□ 0.72
PRAME-207ENST00000420709 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.54■□□□□ 0.72
PRAME-207ENST00000420709 RRBP1Q9P2E9 1410 aaKnown RBP19.54■□□□□ 0.72
PRAME-207ENST00000420709 ZNF326Q5BKZ1 582 aaKnown RBP19.54■□□□□ 0.72
PRAME-207ENST00000420709 NRXN3Q9Y4C0 1643 aa19.54■□□□□ 0.72
PRAME-207ENST00000420709 AMOTL2Q9Y2J4 779 aa19.53■□□□□ 0.72
PRAME-207ENST00000420709 PIK3R4Q99570 1358 aa19.53■□□□□ 0.72
PRAME-207ENST00000420709 NCOA3Q9Y6Q9 1424 aa19.52■□□□□ 0.72
PRAME-207ENST00000420709 CLTCL1P53675 1640 aa19.52■□□□□ 0.72
PRAME-207ENST00000420709 COL16A1Q07092 1604 aaPredicted RBP19.51■□□□□ 0.71
PRAME-207ENST00000420709 NAIPQ13075 1403 aa19.51■□□□□ 0.71
PRAME-207ENST00000420709 POTEAQ6S8J7 498 aa19.5■□□□□ 0.71
PRAME-207ENST00000420709 SETBP1Q9Y6X0 1596 aa19.49■□□□□ 0.71
PRAME-207ENST00000420709 ATF3P18847 181 aa19.49■□□□□ 0.71
PRAME-207ENST00000420709 XRN1Q8IZH2 1706 aaKnown RBP19.48■□□□□ 0.71
PRAME-207ENST00000420709 JCADQ9P266 1359 aa19.48■□□□□ 0.71
PRAME-207ENST00000420709 CADPS2Q86UW7 1296 aa19.48■□□□□ 0.71
PRAME-207ENST00000420709 C19orf44Q9H6X5 657 aa19.48■□□□□ 0.71
PRAME-207ENST00000420709 NEXMIFQ5QGS0 1516 aa19.46■□□□□ 0.71
PRAME-207ENST00000420709 METP08581 1390 aa19.46■□□□□ 0.71
PRAME-207ENST00000420709 TRIM52Q96A61 297 aa19.45■□□□□ 0.7
PRAME-207ENST00000420709 KIF1BO60333 1816 aa19.44■□□□□ 0.7
PRAME-207ENST00000420709 AHDC1Q5TGY3 1603 aaPredicted RBP19.44■□□□□ 0.7
PRAME-207ENST00000420709 LRP6O75581 1613 aa19.43■□□□□ 0.7
PRAME-207ENST00000420709 BRINP3Q76B58 766 aa19.42■□□□□ 0.7
PRAME-207ENST00000420709 HFM1A2PYH4 1435 aa19.41■□□□□ 0.7
PRAME-207ENST00000420709 DCCP43146 1447 aa19.4■□□□□ 0.7
PRAME-207ENST00000420709 ASXL1Q8IXJ9 1541 aa19.39■□□□□ 0.69
PRAME-207ENST00000420709 SHPRHQ149N8 1683 aa19.39■□□□□ 0.69
PRAME-207ENST00000420709 SETD1AO15047 1707 aaKnown RBP19.39■□□□□ 0.69
PRAME-207ENST00000420709 MST1RQ04912 1400 aa19.38■□□□□ 0.69
PRAME-207ENST00000420709 MEX3CQ5U5Q3 659 aaKnown RBP19.38■□□□□ 0.69
PRAME-207ENST00000420709 NALCNQ8IZF0 1738 aa19.38■□□□□ 0.69
PRAME-207ENST00000420709 SPATA31A6Q5VVP1 1343 aa19.37■□□□□ 0.69
PRAME-207ENST00000420709 SLC4A1APQ9BWU0 796 aaKnown RBP19.37■□□□□ 0.69
PRAME-207ENST00000420709 ADGRL3Q9HAR2 1447 aa19.35■□□□□ 0.69
PRAME-207ENST00000420709 NHSL1Q5SYE7 1610 aa19.34■□□□□ 0.69
PRAME-207ENST00000420709 NUTM2BA6NNL0 878 aaPredicted RBP19.34■□□□□ 0.69
PRAME-207ENST00000420709 NUTM2EB1AL46 878 aaPredicted RBP19.34■□□□□ 0.69
PRAME-207ENST00000420709 FOXD1Q16676 465 aa19.34■□□□□ 0.69
PRAME-207ENST00000420709 NUTM2AQ8IVF1 878 aaPredicted RBP19.34■□□□□ 0.69
PRAME-207ENST00000420709 DDX17Q92841 729 aaKnown RBP19.34■□□□□ 0.69
PRAME-207ENST00000420709 VGFO15240 615 aaPredicted RBP19.32■□□□□ 0.68
PRAME-207ENST00000420709 PPLO60437 1756 aa19.31■□□□□ 0.68
PRAME-207ENST00000420709 ROBO2Q9HCK4 1378 aa19.3■□□□□ 0.68
PRAME-207ENST00000420709 PTCH1Q13635 1447 aa19.29■□□□□ 0.68
PRAME-207ENST00000420709 SETD5Q9C0A6 1442 aa19.29■□□□□ 0.68
PRAME-207ENST00000420709 RPGRIP1LQ68CZ1 1315 aa19.27■□□□□ 0.68
PRAME-207ENST00000420709 ZNF772Q68DY9 489 aaPredicted RBP19.27■□□□□ 0.68
PRAME-207ENST00000420709 C1orf167Q5SNV9 1468 aa19.27■□□□□ 0.67
PRAME-207ENST00000420709 LRRC59Q96AG4 307 aaKnown RBP19.25■□□□□ 0.67
PRAME-207ENST00000420709 PNPLA6Q8IY17 1366 aa19.24■□□□□ 0.67
PRAME-207ENST00000420709 RGL3Q3MIN7 710 aa19.23■□□□□ 0.67
PRAME-207ENST00000420709 ORAI2Q96SN7 254 aa19.23■□□□□ 0.67
PRAME-207ENST00000420709 CCDC144AA2RUR9 1427 aa19.23■□□□□ 0.67
PRAME-207ENST00000420709 AFF2P51816 1311 aa19.23■□□□□ 0.67
PRAME-207ENST00000420709 ADGRF5Q8IZF2 1346 aa19.23■□□□□ 0.67
PRAME-207ENST00000420709 PRAG1Q86YV5 1406 aa19.21■□□□□ 0.67
PRAME-207ENST00000420709 MPHOSPH9Q99550 1183 aa19.21■□□□□ 0.67
PRAME-207ENST00000420709 C8orf37Q96NL8 207 aa19.2■□□□□ 0.66
PRAME-207ENST00000420709 IFT172Q9UG01 1749 aa19.2■□□□□ 0.66
PRAME-207ENST00000420709 SPATA31E1Q6ZUB1 1445 aa19.19■□□□□ 0.66
PRAME-207ENST00000420709 RXRBP28702 533 aa19.19■□□□□ 0.66
PRAME-207ENST00000420709 LAMC1P11047 1609 aa19.18■□□□□ 0.66
PRAME-207ENST00000420709 STK26Q9P289 416 aa19.18■□□□□ 0.66
PRAME-207ENST00000420709 ADAMTS2O95450 1211 aa19.17■□□□□ 0.66
PRAME-207ENST00000420709 CDC42BPGQ6DT37 1551 aa19.15■□□□□ 0.66
PRAME-207ENST00000420709 WAPLQ7Z5K2 1190 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms