RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 MED14O60244 1454 aa29.66■■■□□ 2.34
EGFR-204ENST00000420316 SCAF11Q99590 1463 aaKnown RBP29.66■■■□□ 2.34
EGFR-204ENST00000420316 RGL3Q3MIN7 710 aa29.65■■■□□ 2.34
EGFR-204ENST00000420316 ZFYVE9O95405 1425 aa29.64■■■□□ 2.34
EGFR-204ENST00000420316 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.64■■■□□ 2.33
EGFR-204ENST00000420316 SIN3AQ96ST3 1273 aa29.64■■■□□ 2.33
EGFR-204ENST00000420316 RIMS2Q9UQ26 1411 aa29.63■■■□□ 2.33
EGFR-204ENST00000420316 POLR1AO95602 1720 aaPredicted RBP29.62■■■□□ 2.33
EGFR-204ENST00000420316 NEURL4Q96JN8 1562 aa29.62■■■□□ 2.33
EGFR-204ENST00000420316 NPHP4O75161 1426 aaPredicted RBP29.62■■■□□ 2.33
EGFR-204ENST00000420316 SPATA31E1Q6ZUB1 1445 aa29.59■■■□□ 2.33
EGFR-204ENST00000420316 NEUROD1Q13562 356 aa29.58■■■□□ 2.33
EGFR-204ENST00000420316 RPGRIP1LQ68CZ1 1315 aa29.57■■■□□ 2.32
EGFR-204ENST00000420316 PPP1R15AO75807 674 aaPredicted RBP29.56■■■□□ 2.32
EGFR-204ENST00000420316 NEXMIFQ5QGS0 1516 aa29.54■■■□□ 2.32
EGFR-204ENST00000420316 PLEKHG1Q9ULL1 1385 aa29.52■■■□□ 2.32
EGFR-204ENST00000420316 IQGAP1P46940 1657 aa29.51■■■□□ 2.31
EGFR-204ENST00000420316 PPLO60437 1756 aa29.5■■■□□ 2.31
EGFR-204ENST00000420316 CCER1Q8TC90 406 aaPredicted RBP29.5■■■□□ 2.31
EGFR-204ENST00000420316 VGFO15240 615 aaPredicted RBP29.48■■■□□ 2.31
EGFR-204ENST00000420316 BCANQ96GW7 911 aa29.48■■■□□ 2.31
EGFR-204ENST00000420316 IFT172Q9UG01 1749 aa29.47■■■□□ 2.31
EGFR-204ENST00000420316 SLC26A8Q96RN1 970 aa29.43■■■□□ 2.3
EGFR-204ENST00000420316 KDM2AQ9Y2K7 1162 aa29.43■■■□□ 2.3
EGFR-204ENST00000420316 TBX22Q9Y458 520 aa29.42■■■□□ 2.3
EGFR-204ENST00000420316 ADGRF5Q8IZF2 1346 aa29.41■■■□□ 2.3
EGFR-204ENST00000420316 ZNF335Q9H4Z2 1342 aaPredicted RBP29.41■■■□□ 2.3
EGFR-204ENST00000420316 DCAF11Q8TEB1 546 aa29.41■■■□□ 2.3
EGFR-204ENST00000420316 ADAMTS13Q76LX8 1427 aa29.38■■■□□ 2.29
EGFR-204ENST00000420316 NRXN3Q9Y4C0 1643 aa29.36■■■□□ 2.29
EGFR-204ENST00000420316 L3MBTL2Q969R5 705 aa29.35■■■□□ 2.29
EGFR-204ENST00000420316 STAC3Q96MF2 364 aa29.35■■■□□ 2.29
EGFR-204ENST00000420316 SETBP1Q9Y6X0 1596 aa29.35■■■□□ 2.29
EGFR-204ENST00000420316 LTBP4Q8N2S1 1624 aa29.33■■■□□ 2.29
EGFR-204ENST00000420316 DIP2AQ14689 1571 aa29.32■■■□□ 2.28
EGFR-204ENST00000420316 PIK3R4Q99570 1358 aa29.31■■■□□ 2.28
EGFR-204ENST00000420316 KCNA6P17658 529 aa29.3■■■□□ 2.28
EGFR-204ENST00000420316 MYOM2P54296 1465 aa29.29■■■□□ 2.28
EGFR-204ENST00000420316 TONSLQ96HA7 1378 aa29.28■■■□□ 2.28
EGFR-204ENST00000420316 CERKQ8TCT0 537 aa29.27■■■□□ 2.28
EGFR-204ENST00000420316 CLSPNQ9HAW4 1339 aa29.27■■■□□ 2.28
EGFR-204ENST00000420316 CPS1P31327 1500 aa29.27■■■□□ 2.28
EGFR-204ENST00000420316 ALKQ9UM73 1620 aa29.26■■■□□ 2.27
EGFR-204ENST00000420316 PIK3C2GO75747 1445 aa29.25■■■□□ 2.27
EGFR-204ENST00000420316 NRXN1Q9ULB1 1477 aa29.25■■■□□ 2.27
EGFR-204ENST00000420316 STRCP1A6NGW2 1772 aa29.25■■■□□ 2.27
EGFR-204ENST00000420316 SETD1AO15047 1707 aaKnown RBP29.24■■■□□ 2.27
EGFR-204ENST00000420316 CFAP70Q5T0N1 1121 aa29.23■■■□□ 2.27
EGFR-204ENST00000420316 METP08581 1390 aa29.23■■■□□ 2.27
EGFR-204ENST00000420316 C14orf93Q9H972 538 aaKnown RBP29.2■■■□□ 2.26
EGFR-204ENST00000420316 TMEM132EQ6IEE7 984 aa29.19■■■□□ 2.26
EGFR-204ENST00000420316 PTPRUQ92729 1446 aa29.19■■■□□ 2.26
EGFR-204ENST00000420316 AMOTL2Q9Y2J4 779 aa29.18■■■□□ 2.26
EGFR-204ENST00000420316 NWD1Q149M9 1564 aa29.18■■■□□ 2.26
EGFR-204ENST00000420316 CHD2O14647 1828 aaKnown RBP29.18■■■□□ 2.26
EGFR-204ENST00000420316 PRAG1Q86YV5 1406 aa29.16■■■□□ 2.26
EGFR-204ENST00000420316 NKTRP30414 1462 aaKnown RBP29.16■■■□□ 2.26
EGFR-204ENST00000420316 ASXL1Q8IXJ9 1541 aa29.16■■■□□ 2.26
EGFR-204ENST00000420316 IQSEC2Q5JU85 1478 aa29.15■■■□□ 2.26
EGFR-204ENST00000420316 LRRC7Q96NW7 1537 aa29.15■■■□□ 2.26
EGFR-204ENST00000420316 NBPF8Q3BBV2 869 aa29.14■■■□□ 2.26
EGFR-204ENST00000420316 PROSER2Q86WR7 435 aaPredicted RBP29.14■■■□□ 2.26
EGFR-204ENST00000420316 RBM33Q96EV2 1170 aaKnown RBP29.13■■■□□ 2.25
EGFR-204ENST00000420316 STK26Q9P289 416 aa29.12■■■□□ 2.25
EGFR-204ENST00000420316 LAMC1P11047 1609 aa29.11■■■□□ 2.25
EGFR-204ENST00000420316 NBPF1Q3BBV0 1214 aa29.09■■■□□ 2.25
EGFR-204ENST00000420316 TMEM94Q12767 1356 aa29.08■■■□□ 2.25
EGFR-204ENST00000420316 XRN1Q8IZH2 1706 aaKnown RBP29.07■■■□□ 2.24
EGFR-204ENST00000420316 NCOA3Q9Y6Q9 1424 aa29.05■■■□□ 2.24
EGFR-204ENST00000420316 TRPM1Q7Z4N2 1603 aa29.05■■■□□ 2.24
EGFR-204ENST00000420316 ADGRB1O14514 1584 aa29.04■■■□□ 2.24
EGFR-204ENST00000420316 LRPPRCP42704 1394 aaKnown RBP29.04■■■□□ 2.24
EGFR-204ENST00000420316 ABCC11Q96J66 1382 aa29.04■■■□□ 2.24
EGFR-204ENST00000420316 KIAA1210Q9ULL0 1709 aa29.03■■■□□ 2.24
EGFR-204ENST00000420316 YTHDC2Q9H6S0 1430 aaKnown RBP29.02■■■□□ 2.24
EGFR-204ENST00000420316 TIMELESSQ9UNS1 1208 aa29.02■■■□□ 2.24
EGFR-204ENST00000420316 XIRP1Q702N8 1843 aaKnown RBP29.01■■■□□ 2.24
EGFR-204ENST00000420316 PTCH1Q13635 1447 aa29.01■■■□□ 2.23
EGFR-204ENST00000420316 TECPR2O15040 1411 aa29■■■□□ 2.23
EGFR-204ENST00000420316 ROBO2Q9HCK4 1378 aa28.99■■■□□ 2.23
EGFR-204ENST00000420316 TRAK1Q9UPV9 953 aa28.99■■■□□ 2.23
EGFR-204ENST00000420316 SIRT1Q96EB6 747 aa28.98■■■□□ 2.23
EGFR-204ENST00000420316 FBXO41Q8TF61 875 aa28.97■■■□□ 2.23
EGFR-204ENST00000420316 WAPLQ7Z5K2 1190 aa28.96■■■□□ 2.23
EGFR-204ENST00000420316 ROCK2O75116 1388 aaKnown RBP28.95■■■□□ 2.23
EGFR-204ENST00000420316 TOM1O60784 492 aa28.95■■■□□ 2.22
EGFR-204ENST00000420316 C14orf37Q86TY3 774 aa28.95■■■□□ 2.22
EGFR-204ENST00000420316 C19orf44Q9H6X5 657 aa28.95■■■□□ 2.22
EGFR-204ENST00000420316 KNDC1Q76NI1 1749 aa28.95■■■□□ 2.22
EGFR-204ENST00000420316 MSH6P52701 1360 aa28.95■■■□□ 2.22
EGFR-204ENST00000420316 UBAP1LF5GYI3 381 aa28.94■■■□□ 2.22
EGFR-204ENST00000420316 PLEKHH1Q9ULM0 1364 aa28.94■■■□□ 2.22
EGFR-204ENST00000420316 SAFB2Q14151 953 aaKnown RBP eCLIP28.92■■■□□ 2.22
EGFR-204ENST00000420316 FAM135BQ49AJ0 1406 aa28.91■■■□□ 2.22
EGFR-204ENST00000420316 RALGAPBQ86X10 1494 aa28.91■■■□□ 2.22
EGFR-204ENST00000420316 PRAM1Q96QH2 718 aa28.88■■■□□ 2.21
EGFR-204ENST00000420316 ARHGEF28Q8N1W1 1705 aaKnown RBP28.88■■■□□ 2.21
EGFR-204ENST00000420316 DLC1Q96QB1 1528 aa28.87■■■□□ 2.21
EGFR-204ENST00000420316 CARD11Q9BXL7 1154 aa28.87■■■□□ 2.21
EGFR-204ENST00000420316 ADGRL3Q9HAR2 1447 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms