RNA–Protein interactions for RNA: ENST00000420296.1

NDUFA3-207, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-207ENST00000420296 SLC26A8Q96RN1 970 aa14.02□□□□□ -0.17
NDUFA3-207ENST00000420296 EID1Q9Y6B2 187 aa14.02□□□□□ -0.17
NDUFA3-207ENST00000420296 ZFYVE9O95405 1425 aa14.01□□□□□ -0.17
NDUFA3-207ENST00000420296 SPHKAPQ2M3C7 1700 aa14.01□□□□□ -0.17
NDUFA3-207ENST00000420296 ROCK1Q13464 1354 aa13.99□□□□□ -0.17
NDUFA3-207ENST00000420296 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
NDUFA3-207ENST00000420296 ROBO1Q9Y6N7 1651 aa13.98□□□□□ -0.17
NDUFA3-207ENST00000420296 SOCS7O14512 581 aa13.97□□□□□ -0.17
NDUFA3-207ENST00000420296 NUTM2DQ5VT03 806 aaPredicted RBP13.97□□□□□ -0.17
NDUFA3-207ENST00000420296 TMEM94Q12767 1356 aa13.96□□□□□ -0.17
NDUFA3-207ENST00000420296 SLC52A1Q9NWF4 448 aa13.96□□□□□ -0.17
NDUFA3-207ENST00000420296 CHGAP10645 457 aaKnown RBP13.95□□□□□ -0.18
NDUFA3-207ENST00000420296 NUP155O75694 1391 aa13.95□□□□□ -0.18
NDUFA3-207ENST00000420296 NKTRP30414 1462 aaKnown RBP13.94□□□□□ -0.18
NDUFA3-207ENST00000420296 BCANQ96GW7 911 aa13.94□□□□□ -0.18
NDUFA3-207ENST00000420296 CLTCL1P53675 1640 aa13.93□□□□□ -0.18
NDUFA3-207ENST00000420296 NRXN3Q9Y4C0 1643 aa13.93□□□□□ -0.18
NDUFA3-207ENST00000420296 KCNA6P17658 529 aa13.93□□□□□ -0.18
NDUFA3-207ENST00000420296 PLEKHG1Q9ULL1 1385 aa13.93□□□□□ -0.18
NDUFA3-207ENST00000420296 PROSER2Q86WR7 435 aaPredicted RBP13.92□□□□□ -0.18
NDUFA3-207ENST00000420296 ADAMTS13Q76LX8 1427 aa13.91□□□□□ -0.18
NDUFA3-207ENST00000420296 RRBP1Q9P2E9 1410 aaKnown RBP13.91□□□□□ -0.18
NDUFA3-207ENST00000420296 PHLPP1O60346 1717 aa13.91□□□□□ -0.18
NDUFA3-207ENST00000420296 PPP1R15AO75807 674 aaPredicted RBP13.91□□□□□ -0.18
NDUFA3-207ENST00000420296 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.9□□□□□ -0.18
NDUFA3-207ENST00000420296 KIF1BO60333 1816 aa13.9□□□□□ -0.18
NDUFA3-207ENST00000420296 DIP2AQ14689 1571 aa13.89□□□□□ -0.19
NDUFA3-207ENST00000420296 NAIPQ13075 1403 aa13.88□□□□□ -0.19
NDUFA3-207ENST00000420296 XRN1Q8IZH2 1706 aaKnown RBP13.87□□□□□ -0.19
NDUFA3-207ENST00000420296 PTPRUQ92729 1446 aa13.87□□□□□ -0.19
NDUFA3-207ENST00000420296 TRPM2O94759 1503 aa13.86□□□□□ -0.19
NDUFA3-207ENST00000420296 FAM135BQ49AJ0 1406 aa13.86□□□□□ -0.19
NDUFA3-207ENST00000420296 NEXMIFQ5QGS0 1516 aa13.85□□□□□ -0.19
NDUFA3-207ENST00000420296 MSH6P52701 1360 aa13.85□□□□□ -0.19
NDUFA3-207ENST00000420296 PHF23Q9BUL5 403 aaPredicted RBP13.85□□□□□ -0.19
NDUFA3-207ENST00000420296 COL16A1Q07092 1604 aaPredicted RBP13.85□□□□□ -0.19
NDUFA3-207ENST00000420296 SETD1AO15047 1707 aaKnown RBP13.84□□□□□ -0.19
NDUFA3-207ENST00000420296 SETBP1Q9Y6X0 1596 aa13.84□□□□□ -0.19
NDUFA3-207ENST00000420296 TBX22Q9Y458 520 aa13.83□□□□□ -0.2
NDUFA3-207ENST00000420296 NALCNQ8IZF0 1738 aa13.83□□□□□ -0.2
NDUFA3-207ENST00000420296 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.82□□□□□ -0.2
NDUFA3-207ENST00000420296 RGS17Q9UGC6 210 aaPredicted RBP13.82□□□□□ -0.2
NDUFA3-207ENST00000420296 PPLO60437 1756 aa13.81□□□□□ -0.2
NDUFA3-207ENST00000420296 HDGFP51858 240 aaKnown RBP13.79□□□□□ -0.2
NDUFA3-207ENST00000420296 ZNF326Q5BKZ1 582 aaKnown RBP13.79□□□□□ -0.2
NDUFA3-207ENST00000420296 C14orf37Q86TY3 774 aa13.79□□□□□ -0.2
NDUFA3-207ENST00000420296 SLAIN2Q9P270 581 aa13.79□□□□□ -0.2
NDUFA3-207ENST00000420296 METP08581 1390 aa13.79□□□□□ -0.2
NDUFA3-207ENST00000420296 HFM1A2PYH4 1435 aa13.79□□□□□ -0.2
NDUFA3-207ENST00000420296 AMOTL2Q9Y2J4 779 aa13.78□□□□□ -0.2
NDUFA3-207ENST00000420296 SHPRHQ149N8 1683 aa13.77□□□□□ -0.21
NDUFA3-207ENST00000420296 AHDC1Q5TGY3 1603 aaPredicted RBP13.77□□□□□ -0.21
NDUFA3-207ENST00000420296 PIK3R4Q99570 1358 aa13.77□□□□□ -0.21
NDUFA3-207ENST00000420296 LRP6O75581 1613 aa13.76□□□□□ -0.21
NDUFA3-207ENST00000420296 NHSL1Q5SYE7 1610 aa13.76□□□□□ -0.21
NDUFA3-207ENST00000420296 TRIM52Q96A61 297 aa13.76□□□□□ -0.21
NDUFA3-207ENST00000420296 IFT172Q9UG01 1749 aa13.76□□□□□ -0.21
NDUFA3-207ENST00000420296 FOXD1Q16676 465 aa13.75□□□□□ -0.21
NDUFA3-207ENST00000420296 NCOA3Q9Y6Q9 1424 aa13.74□□□□□ -0.21
NDUFA3-207ENST00000420296 POTEAQ6S8J7 498 aa13.73□□□□□ -0.21
NDUFA3-207ENST00000420296 ASXL1Q8IXJ9 1541 aa13.73□□□□□ -0.21
NDUFA3-207ENST00000420296 ATF3P18847 181 aa13.72□□□□□ -0.21
NDUFA3-207ENST00000420296 C19orf44Q9H6X5 657 aa13.72□□□□□ -0.21
NDUFA3-207ENST00000420296 MST1RQ04912 1400 aa13.72□□□□□ -0.21
NDUFA3-207ENST00000420296 JCADQ9P266 1359 aa13.71□□□□□ -0.21
NDUFA3-207ENST00000420296 SLC4A1APQ9BWU0 796 aaKnown RBP13.71□□□□□ -0.21
NDUFA3-207ENST00000420296 BRINP3Q76B58 766 aa13.7□□□□□ -0.22
NDUFA3-207ENST00000420296 CADPS2Q86UW7 1296 aa13.7□□□□□ -0.22
NDUFA3-207ENST00000420296 ADGRL3Q9HAR2 1447 aa13.7□□□□□ -0.22
NDUFA3-207ENST00000420296 DDX17Q92841 729 aaKnown RBP13.69□□□□□ -0.22
NDUFA3-207ENST00000420296 DCCP43146 1447 aa13.69□□□□□ -0.22
NDUFA3-207ENST00000420296 ROBO2Q9HCK4 1378 aa13.68□□□□□ -0.22
NDUFA3-207ENST00000420296 PTCH1Q13635 1447 aa13.65□□□□□ -0.22
NDUFA3-207ENST00000420296 KNDC1Q76NI1 1749 aa13.64□□□□□ -0.23
NDUFA3-207ENST00000420296 LAMC1P11047 1609 aa13.64□□□□□ -0.23
NDUFA3-207ENST00000420296 SPATA31E1Q6ZUB1 1445 aa13.64□□□□□ -0.23
NDUFA3-207ENST00000420296 ADGRF5Q8IZF2 1346 aa13.64□□□□□ -0.23
NDUFA3-207ENST00000420296 NUTM2BA6NNL0 878 aaPredicted RBP13.63□□□□□ -0.23
NDUFA3-207ENST00000420296 NUTM2EB1AL46 878 aaPredicted RBP13.63□□□□□ -0.23
NDUFA3-207ENST00000420296 NUTM2AQ8IVF1 878 aaPredicted RBP13.63□□□□□ -0.23
NDUFA3-207ENST00000420296 CCDC144AA2RUR9 1427 aa13.63□□□□□ -0.23
NDUFA3-207ENST00000420296 RGPD8O14715 1765 aaPredicted RBP13.63□□□□□ -0.23
NDUFA3-207ENST00000420296 C1orf167Q5SNV9 1468 aa13.62□□□□□ -0.23
NDUFA3-207ENST00000420296 RGL3Q3MIN7 710 aa13.62□□□□□ -0.23
NDUFA3-207ENST00000420296 VGFO15240 615 aaPredicted RBP13.61□□□□□ -0.23
NDUFA3-207ENST00000420296 MEX3CQ5U5Q3 659 aaKnown RBP13.61□□□□□ -0.23
NDUFA3-207ENST00000420296 MPHOSPH9Q99550 1183 aa13.61□□□□□ -0.23
NDUFA3-207ENST00000420296 PRAG1Q86YV5 1406 aa13.61□□□□□ -0.23
NDUFA3-207ENST00000420296 SETD5Q9C0A6 1442 aa13.61□□□□□ -0.23
NDUFA3-207ENST00000420296 SPATA31A6Q5VVP1 1343 aa13.61□□□□□ -0.23
NDUFA3-207ENST00000420296 CDC42BPGQ6DT37 1551 aa13.6□□□□□ -0.23
NDUFA3-207ENST00000420296 RPGRIP1LQ68CZ1 1315 aa13.6□□□□□ -0.23
NDUFA3-207ENST00000420296 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
NDUFA3-207ENST00000420296 FMN2Q9NZ56 1722 aa13.59□□□□□ -0.23
NDUFA3-207ENST00000420296 PNPLA6Q8IY17 1366 aa13.58□□□□□ -0.23
NDUFA3-207ENST00000420296 TRIM26Q12899 539 aaPredicted RBP13.58□□□□□ -0.24
NDUFA3-207ENST00000420296 PLEKHH1Q9ULM0 1364 aa13.58□□□□□ -0.24
NDUFA3-207ENST00000420296 PIK3C2GO75747 1445 aa13.57□□□□□ -0.24
NDUFA3-207ENST00000420296 MARF1Q9Y4F3 1742 aaKnown RBP13.57□□□□□ -0.24
NDUFA3-207ENST00000420296 STK26Q9P289 416 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms