RNA–Protein interactions for RNA: ENST00000420077.5

SEMA4F-204, Transcript of ssemaphorin 4F, humanhuman

TSL 1 (best)

Gene SEMA4F, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-204ENST00000420077 IFT172Q9UG01 1749 aa22.54■■□□□ 1.2
SEMA4F-204ENST00000420077 ANP32EQ9BTT0 268 aa22.53■■□□□ 1.2
SEMA4F-204ENST00000420077 MAP3K4Q9Y6R4 1608 aa22.53■■□□□ 1.2
SEMA4F-204ENST00000420077 BLMP54132 1417 aaPredicted RBP22.52■■□□□ 1.2
SEMA4F-204ENST00000420077 FAM69CQ0P6D2 419 aa22.52■■□□□ 1.2
SEMA4F-204ENST00000420077 MYOM1P52179 1685 aa22.52■■□□□ 1.2
SEMA4F-204ENST00000420077 PPRC1Q5VV67 1664 aaKnown RBP22.52■■□□□ 1.2
SEMA4F-204ENST00000420077 ZNF518AQ6AHZ1 1483 aa22.52■■□□□ 1.2
SEMA4F-204ENST00000420077 MYOM2P54296 1465 aa22.51■■□□□ 1.19
SEMA4F-204ENST00000420077 UGGT1Q9NYU2 1555 aa22.51■■□□□ 1.19
SEMA4F-204ENST00000420077 CFAP74Q9C0B2 1584 aa22.5■■□□□ 1.19
SEMA4F-204ENST00000420077 LMTK2Q8IWU2 1503 aa22.5■■□□□ 1.19
SEMA4F-204ENST00000420077 ABCA6Q8N139 1617 aa22.5■■□□□ 1.19
SEMA4F-204ENST00000420077 MROH2AA6NES4 1674 aa22.49■■□□□ 1.19
SEMA4F-204ENST00000420077 EIF3AQ14152 1382 aaKnown RBP22.49■■□□□ 1.19
SEMA4F-204ENST00000420077 PDE3BQ13370 1112 aa22.49■■□□□ 1.19
SEMA4F-204ENST00000420077 FANCIQ9NVI1 1328 aa22.48■■□□□ 1.19
SEMA4F-204ENST00000420077 RAPGEF3O95398 923 aa22.48■■□□□ 1.19
SEMA4F-204ENST00000420077 KDM5AP29375 1690 aaKnown RBP22.48■■□□□ 1.19
SEMA4F-204ENST00000420077 CDCA8Q53HL2 280 aa22.48■■□□□ 1.19
SEMA4F-204ENST00000420077 KNSTRNQ9Y448 316 aa22.43■■□□□ 1.18
SEMA4F-204ENST00000420077 ASXL1Q8IXJ9 1541 aa22.43■■□□□ 1.18
SEMA4F-204ENST00000420077 POGZQ7Z3K3 1410 aa22.42■■□□□ 1.18
SEMA4F-204ENST00000420077 CCDC136Q96JN2 1154 aa22.42■■□□□ 1.18
SEMA4F-204ENST00000420077 NRXN1Q9ULB1 1477 aa22.42■■□□□ 1.18
SEMA4F-204ENST00000420077 RRP1P56182 461 aaKnown RBP22.42■■□□□ 1.18
SEMA4F-204ENST00000420077 TSPOAP1O95153 1857 aa22.41■■□□□ 1.18
SEMA4F-204ENST00000420077 AMER1Q5JTC6 1135 aaPredicted RBP22.41■■□□□ 1.18
SEMA4F-204ENST00000420077 SALL2Q9Y467 1007 aaPredicted RBP22.41■■□□□ 1.18
SEMA4F-204ENST00000420077 FRMPD1Q5SYB0 1578 aa22.41■■□□□ 1.18
SEMA4F-204ENST00000420077 HECW2Q9P2P5 1572 aa22.41■■□□□ 1.18
SEMA4F-204ENST00000420077 ADGRB3O60242 1522 aa22.41■■□□□ 1.18
SEMA4F-204ENST00000420077 RCAN3Q9UKA8 241 aa22.4■■□□□ 1.18
SEMA4F-204ENST00000420077 MYO3AQ8NEV4 1616 aa22.4■■□□□ 1.18
SEMA4F-204ENST00000420077 MLH3Q9UHC1 1453 aa22.39■■□□□ 1.18
SEMA4F-204ENST00000420077 ADGRF5Q8IZF2 1346 aa22.38■■□□□ 1.17
SEMA4F-204ENST00000420077 NPC1L1Q9UHC9 1359 aa22.38■■□□□ 1.17
SEMA4F-204ENST00000420077 MSH5O43196 834 aa22.37■■□□□ 1.17
SEMA4F-204ENST00000420077 PPP2R1AP30153 589 aa22.37■■□□□ 1.17
SEMA4F-204ENST00000420077 CFAP70Q5T0N1 1121 aa22.37■■□□□ 1.17
SEMA4F-204ENST00000420077 ERVK-7P63135 1459 aa22.37■■□□□ 1.17
SEMA4F-204ENST00000420077 DIP2BQ9P265 1576 aa22.36■■□□□ 1.17
SEMA4F-204ENST00000420077 PPLO60437 1756 aa22.36■■□□□ 1.17
SEMA4F-204ENST00000420077 CDCA7LQ96GN5 454 aa22.35■■□□□ 1.17
SEMA4F-204ENST00000420077 SETBP1Q9Y6X0 1596 aa22.35■■□□□ 1.17
SEMA4F-204ENST00000420077 PIK3C2GO75747 1445 aa22.35■■□□□ 1.17
SEMA4F-204ENST00000420077 SLC24A1O60721 1099 aa22.35■■□□□ 1.17
SEMA4F-204ENST00000420077 CFAP65Q6ZU64 1925 aaKnown RBP22.34■■□□□ 1.17
SEMA4F-204ENST00000420077 NPATQ14207 1427 aa22.33■■□□□ 1.17
SEMA4F-204ENST00000420077 ADAMTS8Q9UP79 889 aa22.32■■□□□ 1.16
SEMA4F-204ENST00000420077 NEO1Q92859 1461 aa22.32■■□□□ 1.16
SEMA4F-204ENST00000420077 NOS1P29475 1434 aa22.31■■□□□ 1.16
SEMA4F-204ENST00000420077 SBNO2Q9Y2G9 1366 aa22.31■■□□□ 1.16
SEMA4F-204ENST00000420077 GLI2P10070 1586 aa22.3■■□□□ 1.16
SEMA4F-204ENST00000420077 ZC3H13Q5T200 1668 aaKnown RBP22.3■■□□□ 1.16
SEMA4F-204ENST00000420077 ABCC3O15438 1527 aa22.3■■□□□ 1.16
SEMA4F-204ENST00000420077 CAMSAP1Q5T5Y3 1602 aa22.28■■□□□ 1.16
SEMA4F-204ENST00000420077 WDR43Q15061 677 aaKnown RBP eCLIP22.28■■□□□ 1.16
SEMA4F-204ENST00000420077 GGT6Q6P531 493 aa22.28■■□□□ 1.16
SEMA4F-204ENST00000420077 EXOC6Q8TAG9 804 aa22.28■■□□□ 1.16
SEMA4F-204ENST00000420077 QRICH2Q9H0J4 1663 aa22.25■■□□□ 1.15
SEMA4F-204ENST00000420077 SIGLEC1Q9BZZ2 1709 aa22.25■■□□□ 1.15
SEMA4F-204ENST00000420077 ADGRB1O14514 1584 aa22.24■■□□□ 1.15
SEMA4F-204ENST00000420077 PLEKHH1Q9ULM0 1364 aa22.24■■□□□ 1.15
SEMA4F-204ENST00000420077 PIK3C2BO00750 1634 aa22.23■■□□□ 1.15
SEMA4F-204ENST00000420077 DIP2CQ9Y2E4 1556 aa22.22■■□□□ 1.15
SEMA4F-204ENST00000420077 YEATS2Q9ULM3 1422 aa22.22■■□□□ 1.15
SEMA4F-204ENST00000420077 CHGAP10645 457 aaKnown RBP22.22■■□□□ 1.15
SEMA4F-204ENST00000420077 RICTORQ6R327 1708 aa22.21■■□□□ 1.15
SEMA4F-204ENST00000420077 ZNF521Q96K83 1311 aa22.21■■□□□ 1.15
SEMA4F-204ENST00000420077 CENPJQ9HC77 1338 aaPredicted RBP22.21■■□□□ 1.15
SEMA4F-204ENST00000420077 KIF13AQ9H1H9 1805 aa22.21■■□□□ 1.15
SEMA4F-204ENST00000420077 CARD14Q9BXL6 1004 aa22.19■■□□□ 1.14
SEMA4F-204ENST00000420077 C14orf93Q9H972 538 aaKnown RBP22.19■■□□□ 1.14
SEMA4F-204ENST00000420077 RPGRIP1LQ68CZ1 1315 aa22.19■■□□□ 1.14
SEMA4F-204ENST00000420077 DUSP27Q5VZP5 1158 aa22.16■■□□□ 1.14
SEMA4F-204ENST00000420077 PLIN1O60240 522 aa22.15■■□□□ 1.14
SEMA4F-204ENST00000420077 NEXMIFQ5QGS0 1516 aa22.15■■□□□ 1.14
SEMA4F-204ENST00000420077 ERICH6Q7L0X2 663 aa22.14■■□□□ 1.13
SEMA4F-204ENST00000420077 ARHGEF28Q8N1W1 1705 aaKnown RBP22.14■■□□□ 1.13
SEMA4F-204ENST00000420077 GOLGA2Q08379 1002 aa22.14■■□□□ 1.13
SEMA4F-204ENST00000420077 TRAK1Q9UPV9 953 aa22.14■■□□□ 1.13
SEMA4F-204ENST00000420077 USP32Q8NFA0 1604 aa22.13■■□□□ 1.13
SEMA4F-204ENST00000420077 ARHGAP31Q2M1Z3 1444 aa22.12■■□□□ 1.13
SEMA4F-204ENST00000420077 CRBNQ96SW2 442 aa22.11■■□□□ 1.13
SEMA4F-204ENST00000420077 NSD3Q9BZ95 1437 aa22.11■■□□□ 1.13
SEMA4F-204ENST00000420077 TRHP20396 242 aaPredicted RBP22.1■■□□□ 1.13
SEMA4F-204ENST00000420077 POLR3AO14802 1390 aaPredicted RBP22.1■■□□□ 1.13
SEMA4F-204ENST00000420077 CCDC146Q8IYE0 955 aa22.09■■□□□ 1.13
SEMA4F-204ENST00000420077 SHPRHQ149N8 1683 aa22.09■■□□□ 1.13
SEMA4F-204ENST00000420077 TCERG1O14776 1098 aaKnown RBP22.09■■□□□ 1.13
SEMA4F-204ENST00000420077 SLFN5Q08AF3 891 aa22.09■■□□□ 1.13
SEMA4F-204ENST00000420077 TMEM132EQ6IEE7 984 aa22.09■■□□□ 1.13
SEMA4F-204ENST00000420077 TRMT2AQ8IZ69 625 aaKnown RBP22.07■■□□□ 1.12
SEMA4F-204ENST00000420077 MYO5BQ9ULV0 1848 aa22.07■■□□□ 1.12
SEMA4F-204ENST00000420077 APAF1O14727 1248 aa22.05■■□□□ 1.12
SEMA4F-204ENST00000420077 TULP4Q9NRJ4 1543 aa22.05■■□□□ 1.12
SEMA4F-204ENST00000420077 PREX1Q8TCU6 1659 aa22.05■■□□□ 1.12
SEMA4F-204ENST00000420077 VGFO15240 615 aaPredicted RBP22.05■■□□□ 1.12
SEMA4F-204ENST00000420077 MLECQ14165 292 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms