RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 E9PCH4 1651 aa22.94■■□□□ 1.26
RARA-205ENST00000420042 RIMS2Q9UQ26 1411 aa22.94■■□□□ 1.26
RARA-205ENST00000420042 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
RARA-205ENST00000420042 ALKQ9UM73 1620 aa22.93■■□□□ 1.26
RARA-205ENST00000420042 RRBP1Q9P2E9 1410 aaKnown RBP22.93■■□□□ 1.26
RARA-205ENST00000420042 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.93■■□□□ 1.26
RARA-205ENST00000420042 ZFYVE9O95405 1425 aa22.92■■□□□ 1.26
RARA-205ENST00000420042 PROSER2Q86WR7 435 aaPredicted RBP22.92■■□□□ 1.26
RARA-205ENST00000420042 PLEKHG1Q9ULL1 1385 aa22.91■■□□□ 1.26
RARA-205ENST00000420042 TMEM131LA2VDJ0 1609 aa22.91■■□□□ 1.26
RARA-205ENST00000420042 TMEM94Q12767 1356 aa22.9■■□□□ 1.26
RARA-205ENST00000420042 NUTM2DQ5VT03 806 aaPredicted RBP22.87■■□□□ 1.25
RARA-205ENST00000420042 RBM33Q96EV2 1170 aaKnown RBP22.86■■□□□ 1.25
RARA-205ENST00000420042 MYO5BQ9ULV0 1848 aa22.85■■□□□ 1.25
RARA-205ENST00000420042 TBX22Q9Y458 520 aa22.85■■□□□ 1.25
RARA-205ENST00000420042 NKTRP30414 1462 aaKnown RBP22.84■■□□□ 1.25
RARA-205ENST00000420042 XIRP1Q702N8 1843 aaKnown RBP22.83■■□□□ 1.25
RARA-205ENST00000420042 NAIPQ13075 1403 aa22.82■■□□□ 1.24
RARA-205ENST00000420042 NWD1Q149M9 1564 aa22.82■■□□□ 1.24
RARA-205ENST00000420042 SOCS7O14512 581 aa22.81■■□□□ 1.24
RARA-205ENST00000420042 MSH6P52701 1360 aa22.8■■□□□ 1.24
RARA-205ENST00000420042 ZNF326Q5BKZ1 582 aaKnown RBP22.79■■□□□ 1.24
RARA-205ENST00000420042 TRIM52Q96A61 297 aa22.79■■□□□ 1.24
RARA-205ENST00000420042 MED1Q15648 1581 aaPredicted RBP22.79■■□□□ 1.24
RARA-205ENST00000420042 FAM135BQ49AJ0 1406 aa22.78■■□□□ 1.24
RARA-205ENST00000420042 ADAMTS13Q76LX8 1427 aa22.77■■□□□ 1.24
RARA-205ENST00000420042 HFM1A2PYH4 1435 aa22.76■■□□□ 1.23
RARA-205ENST00000420042 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
RARA-205ENST00000420042 SPHKAPQ2M3C7 1700 aa22.75■■□□□ 1.23
RARA-205ENST00000420042 C14orf37Q86TY3 774 aa22.75■■□□□ 1.23
RARA-205ENST00000420042 PIK3R4Q99570 1358 aa22.75■■□□□ 1.23
RARA-205ENST00000420042 CHD2O14647 1828 aaKnown RBP22.74■■□□□ 1.23
RARA-205ENST00000420042 DIP2AQ14689 1571 aa22.74■■□□□ 1.23
RARA-205ENST00000420042 SLAIN2Q9P270 581 aa22.72■■□□□ 1.23
RARA-205ENST00000420042 SLC4A1APQ9BWU0 796 aaKnown RBP22.71■■□□□ 1.23
RARA-205ENST00000420042 NCOA3Q9Y6Q9 1424 aa22.71■■□□□ 1.23
RARA-205ENST00000420042 AMOTL2Q9Y2J4 779 aa22.7■■□□□ 1.22
RARA-205ENST00000420042 TRPM2O94759 1503 aa22.7■■□□□ 1.22
RARA-205ENST00000420042 C19orf44Q9H6X5 657 aa22.67■■□□□ 1.22
RARA-205ENST00000420042 ROBO1Q9Y6N7 1651 aa22.67■■□□□ 1.22
RARA-205ENST00000420042 CLTCL1P53675 1640 aa22.66■■□□□ 1.22
RARA-205ENST00000420042 ATF3P18847 181 aa22.65■■□□□ 1.22
RARA-205ENST00000420042 CADPS2Q86UW7 1296 aa22.65■■□□□ 1.22
RARA-205ENST00000420042 PTPRUQ92729 1446 aa22.64■■□□□ 1.21
RARA-205ENST00000420042 SETBP1Q9Y6X0 1596 aa22.63■■□□□ 1.21
RARA-205ENST00000420042 NEXMIFQ5QGS0 1516 aa22.61■■□□□ 1.21
RARA-205ENST00000420042 VGFO15240 615 aaPredicted RBP22.6■■□□□ 1.21
RARA-205ENST00000420042 METP08581 1390 aa22.6■■□□□ 1.21
RARA-205ENST00000420042 NRXN3Q9Y4C0 1643 aa22.6■■□□□ 1.21
RARA-205ENST00000420042 KIF1BO60333 1816 aa22.59■■□□□ 1.21
RARA-205ENST00000420042 RPGRIP1LQ68CZ1 1315 aa22.57■■□□□ 1.2
RARA-205ENST00000420042 FOXD1Q16676 465 aa22.57■■□□□ 1.2
RARA-205ENST00000420042 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.55■■□□□ 1.2
RARA-205ENST00000420042 PHLPP1O60346 1717 aa22.54■■□□□ 1.2
RARA-205ENST00000420042 JCADQ9P266 1359 aa22.53■■□□□ 1.2
RARA-205ENST00000420042 MPHOSPH9Q99550 1183 aa22.53■■□□□ 1.2
RARA-205ENST00000420042 XRN1Q8IZH2 1706 aaKnown RBP22.53■■□□□ 1.2
RARA-205ENST00000420042 DCCP43146 1447 aa22.52■■□□□ 1.2
RARA-205ENST00000420042 CCDC144AA2RUR9 1427 aa22.51■■□□□ 1.19
RARA-205ENST00000420042 RGS17Q9UGC6 210 aaPredicted RBP22.51■■□□□ 1.19
RARA-205ENST00000420042 ACIN1Q9UKV3 1341 aaKnown RBP22.51■■□□□ 1.19
RARA-205ENST00000420042 BRINP3Q76B58 766 aa22.49■■□□□ 1.19
RARA-205ENST00000420042 RGL3Q3MIN7 710 aa22.46■■□□□ 1.19
RARA-205ENST00000420042 ADGRL3Q9HAR2 1447 aa22.46■■□□□ 1.19
RARA-205ENST00000420042 COL16A1Q07092 1604 aaPredicted RBP22.46■■□□□ 1.19
RARA-205ENST00000420042 SETD5Q9C0A6 1442 aa22.45■■□□□ 1.18
RARA-205ENST00000420042 MST1RQ04912 1400 aa22.44■■□□□ 1.18
RARA-205ENST00000420042 AHDC1Q5TGY3 1603 aaPredicted RBP22.44■■□□□ 1.18
RARA-205ENST00000420042 SPATA31A6Q5VVP1 1343 aa22.44■■□□□ 1.18
RARA-205ENST00000420042 PTCH1Q13635 1447 aa22.42■■□□□ 1.18
RARA-205ENST00000420042 ROBO2Q9HCK4 1378 aa22.41■■□□□ 1.18
RARA-205ENST00000420042 PPLO60437 1756 aa22.41■■□□□ 1.18
RARA-205ENST00000420042 MEX3CQ5U5Q3 659 aaKnown RBP22.41■■□□□ 1.18
RARA-205ENST00000420042 ASXL1Q8IXJ9 1541 aa22.41■■□□□ 1.18
RARA-205ENST00000420042 ADGRF5Q8IZF2 1346 aa22.4■■□□□ 1.18
RARA-205ENST00000420042 POTEAQ6S8J7 498 aa22.4■■□□□ 1.18
RARA-205ENST00000420042 ANKRD30BQ9BXX2 1392 aa22.39■■□□□ 1.18
RARA-205ENST00000420042 SPATA31E1Q6ZUB1 1445 aa22.39■■□□□ 1.17
RARA-205ENST00000420042 SETD1AO15047 1707 aaKnown RBP22.37■■□□□ 1.17
RARA-205ENST00000420042 NALCNQ8IZF0 1738 aa22.37■■□□□ 1.17
RARA-205ENST00000420042 LRRC59Q96AG4 307 aaKnown RBP22.36■■□□□ 1.17
RARA-205ENST00000420042 PRAG1Q86YV5 1406 aa22.36■■□□□ 1.17
RARA-205ENST00000420042 RAB3GAP2Q9H2M9 1393 aa22.36■■□□□ 1.17
RARA-205ENST00000420042 NUTM2BA6NNL0 878 aaPredicted RBP22.34■■□□□ 1.17
RARA-205ENST00000420042 NUTM2EB1AL46 878 aaPredicted RBP22.34■■□□□ 1.17
RARA-205ENST00000420042 NUTM2AQ8IVF1 878 aaPredicted RBP22.34■■□□□ 1.17
RARA-205ENST00000420042 C1orf167Q5SNV9 1468 aa22.34■■□□□ 1.17
RARA-205ENST00000420042 LRP6O75581 1613 aa22.33■■□□□ 1.17
RARA-205ENST00000420042 DDX17Q92841 729 aaKnown RBP22.33■■□□□ 1.17
RARA-205ENST00000420042 STK26Q9P289 416 aa22.33■■□□□ 1.17
RARA-205ENST00000420042 SHPRHQ149N8 1683 aa22.33■■□□□ 1.16
RARA-205ENST00000420042 ZNF772Q68DY9 489 aaPredicted RBP22.31■■□□□ 1.16
RARA-205ENST00000420042 TMEM132EQ6IEE7 984 aa22.3■■□□□ 1.16
RARA-205ENST00000420042 ORAI2Q96SN7 254 aa22.3■■□□□ 1.16
RARA-205ENST00000420042 NHSL1Q5SYE7 1610 aa22.3■■□□□ 1.16
RARA-205ENST00000420042 PIK3C2GO75747 1445 aa22.29■■□□□ 1.16
RARA-205ENST00000420042 LRPPRCP42704 1394 aaKnown RBP22.28■■□□□ 1.16
RARA-205ENST00000420042 WAPLQ7Z5K2 1190 aa22.28■■□□□ 1.16
RARA-205ENST00000420042 IFT172Q9UG01 1749 aa22.27■■□□□ 1.16
RARA-205ENST00000420042 ABCC11Q96J66 1382 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms