RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 KCNA6P17658 529 aa16.12■□□□□ 0.17
TNFAIP3-202ENST00000420009 IDI1Q13907 227 aa16.12■□□□□ 0.17
TNFAIP3-202ENST00000420009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.171e-9■□□□□ 9.8
TNFAIP3-202ENST00000420009 FGD6Q6ZV73 1430 aa16.11■□□□□ 0.17
TNFAIP3-202ENST00000420009 STAG3Q9UJ98 1225 aa16.1■□□□□ 0.17
TNFAIP3-202ENST00000420009 SLC26A8Q96RN1 970 aa16.09■□□□□ 0.17
TNFAIP3-202ENST00000420009 ANKRD30AQ9BXX3 1397 aa16.09■□□□□ 0.17
TNFAIP3-202ENST00000420009 LOC105371045A0A1W2PR82 267 aa16.08■□□□□ 0.16
TNFAIP3-202ENST00000420009 POTEAQ6S8J7 498 aa16.08■□□□□ 0.16
TNFAIP3-202ENST00000420009 ADGRL2O95490 1459 aa16.06■□□□□ 0.16
TNFAIP3-202ENST00000420009 ZFYVE9O95405 1425 aa16.06■□□□□ 0.16
TNFAIP3-202ENST00000420009 PROSER2Q86WR7 435 aaPredicted RBP16.06■□□□□ 0.16
TNFAIP3-202ENST00000420009 RPRD2Q5VT52 1461 aaKnown RBP16.05■□□□□ 0.16
TNFAIP3-202ENST00000420009 RBM33Q96EV2 1170 aaKnown RBP16.05■□□□□ 0.16
TNFAIP3-202ENST00000420009 MSH6P52701 1360 aa16.04■□□□□ 0.16
TNFAIP3-202ENST00000420009 SLC52A1Q9NWF4 448 aa16.04■□□□□ 0.16
TNFAIP3-202ENST00000420009 PLEKHG1Q9ULL1 1385 aa16.02■□□□□ 0.16
TNFAIP3-202ENST00000420009 CHIC2Q9UKJ5 165 aa16.02■□□□□ 0.16
TNFAIP3-202ENST00000420009 PHLPP1O60346 1717 aa16.02■□□□□ 0.15
TNFAIP3-202ENST00000420009 COL16A1Q07092 1604 aaPredicted RBP16.01■□□□□ 0.15
TNFAIP3-202ENST00000420009 JCADQ9P266 1359 aa16■□□□□ 0.15
TNFAIP3-202ENST00000420009 SLAIN2Q9P270 581 aa16■□□□□ 0.15
TNFAIP3-202ENST00000420009 CHD2O14647 1828 aaKnown RBP16■□□□□ 0.15
TNFAIP3-202ENST00000420009 TMEM131LA2VDJ0 1609 aa16■□□□□ 0.15
TNFAIP3-202ENST00000420009 SETD1AO15047 1707 aaKnown RBP15.99■□□□□ 0.15
TNFAIP3-202ENST00000420009 GCC2Q8IWJ2 1684 aa15.99■□□□□ 0.15
TNFAIP3-202ENST00000420009 RIMS2Q9UQ26 1411 aa15.99■□□□□ 0.15
TNFAIP3-202ENST00000420009 ANKRD50Q9ULJ7 1429 aa15.98■□□□□ 0.15
TNFAIP3-202ENST00000420009 NCOA3Q9Y6Q9 1424 aa15.98■□□□□ 0.15
TNFAIP3-202ENST00000420009 MYO5BQ9ULV0 1848 aa15.98■□□□□ 0.15
TNFAIP3-202ENST00000420009 APLP2Q06481 763 aa15.97■□□□□ 0.15
TNFAIP3-202ENST00000420009 LRP6O75581 1613 aa15.96■□□□□ 0.15
TNFAIP3-202ENST00000420009 AHDC1Q5TGY3 1603 aaPredicted RBP15.95■□□□□ 0.14
TNFAIP3-202ENST00000420009 BCANQ96GW7 911 aa15.95■□□□□ 0.14
TNFAIP3-202ENST00000420009 UNC13BO14795 1591 aa15.95■□□□□ 0.14
TNFAIP3-202ENST00000420009 DIP2AQ14689 1571 aa15.95■□□□□ 0.14
TNFAIP3-202ENST00000420009 ADAMTS13Q76LX8 1427 aa15.94■□□□□ 0.14
TNFAIP3-202ENST00000420009 TBX22Q9Y458 520 aa15.94■□□□□ 0.14
TNFAIP3-202ENST00000420009 PPP1R15AO75807 674 aaPredicted RBP15.93■□□□□ 0.14
TNFAIP3-202ENST00000420009 SPATA31A6Q5VVP1 1343 aa15.93■□□□□ 0.14
TNFAIP3-202ENST00000420009 PIK3R4Q99570 1358 aa15.92■□□□□ 0.14
TNFAIP3-202ENST00000420009 HDGFP51858 240 aaKnown RBP15.92■□□□□ 0.14
TNFAIP3-202ENST00000420009 SHPRHQ149N8 1683 aa15.92■□□□□ 0.14
TNFAIP3-202ENST00000420009 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.91■□□□□ 0.14
TNFAIP3-202ENST00000420009 E9PCH4 1651 aa15.9■□□□□ 0.14
TNFAIP3-202ENST00000420009 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.9■□□□□ 0.14
TNFAIP3-202ENST00000420009 CADPS2Q86UW7 1296 aa15.89■□□□□ 0.13
TNFAIP3-202ENST00000420009 IQGAP3Q86VI3 1631 aa15.88■□□□□ 0.13
TNFAIP3-202ENST00000420009 C19orf44Q9H6X5 657 aa15.88■□□□□ 0.13
TNFAIP3-202ENST00000420009 TRPM2O94759 1503 aa15.88■□□□□ 0.13
TNFAIP3-202ENST00000420009 FAM50AQ14320 339 aaKnown RBP15.87■□□□□ 0.13
TNFAIP3-202ENST00000420009 DCCP43146 1447 aa15.86■□□□□ 0.13
TNFAIP3-202ENST00000420009 ZNF772Q68DY9 489 aaPredicted RBP15.86■□□□□ 0.13
TNFAIP3-202ENST00000420009 C14orf37Q86TY3 774 aa15.86■□□□□ 0.13
TNFAIP3-202ENST00000420009 PTPRUQ92729 1446 aa15.85■□□□□ 0.13
TNFAIP3-202ENST00000420009 ROCK1Q13464 1354 aa15.85■□□□□ 0.13
TNFAIP3-202ENST00000420009 XRN1Q8IZH2 1706 aaKnown RBP15.85■□□□□ 0.13
TNFAIP3-202ENST00000420009 CHGAP10645 457 aaKnown RBP15.84■□□□□ 0.13
TNFAIP3-202ENST00000420009 ATF3P18847 181 aa15.84■□□□□ 0.13
TNFAIP3-202ENST00000420009 MEX3CQ5U5Q3 659 aaKnown RBP15.84■□□□□ 0.13
TNFAIP3-202ENST00000420009 CDK12Q9NYV4 1490 aaPredicted RBP15.84■□□□□ 0.13
TNFAIP3-202ENST00000420009 ASXL1Q8IXJ9 1541 aa15.84■□□□□ 0.13
TNFAIP3-202ENST00000420009 NRXN3Q9Y4C0 1643 aa15.83■□□□□ 0.13
TNFAIP3-202ENST00000420009 NUTM2DQ5VT03 806 aaPredicted RBP15.83■□□□□ 0.12
TNFAIP3-202ENST00000420009 BRINP3Q76B58 766 aa15.83■□□□□ 0.12
TNFAIP3-202ENST00000420009 UPF1Q92900 1129 aaKnown RBP eCLIP15.83■□□□□ 0.12
TNFAIP3-202ENST00000420009 SETBP1Q9Y6X0 1596 aa15.83■□□□□ 0.12
TNFAIP3-202ENST00000420009 SETD5Q9C0A6 1442 aa15.81■□□□□ 0.12
TNFAIP3-202ENST00000420009 AMOTL2Q9Y2J4 779 aa15.81■□□□□ 0.12
TNFAIP3-202ENST00000420009 NHSL1Q5SYE7 1610 aa15.8■□□□□ 0.12
TNFAIP3-202ENST00000420009 MST1RQ04912 1400 aa15.8■□□□□ 0.12
TNFAIP3-202ENST00000420009 NCBP3Q53F19 620 aaKnown RBP15.8■□□□□ 0.12
TNFAIP3-202ENST00000420009 TRIM52Q96A61 297 aa15.8■□□□□ 0.12
TNFAIP3-202ENST00000420009 NUP155O75694 1391 aa15.77■□□□□ 0.12
TNFAIP3-202ENST00000420009 RXRBP28702 533 aa15.77■□□□□ 0.12
TNFAIP3-202ENST00000420009 ADGRL3Q9HAR2 1447 aa15.76■□□□□ 0.11
TNFAIP3-202ENST00000420009 AFF2P51816 1311 aa15.75■□□□□ 0.11
TNFAIP3-202ENST00000420009 SPHKAPQ2M3C7 1700 aa15.75■□□□□ 0.11
TNFAIP3-202ENST00000420009 NUTM2BA6NNL0 878 aaPredicted RBP15.75■□□□□ 0.11
TNFAIP3-202ENST00000420009 NUTM2EB1AL46 878 aaPredicted RBP15.75■□□□□ 0.11
TNFAIP3-202ENST00000420009 NUTM2AQ8IVF1 878 aaPredicted RBP15.75■□□□□ 0.11
TNFAIP3-202ENST00000420009 METP08581 1390 aa15.75■□□□□ 0.11
TNFAIP3-202ENST00000420009 NALCNQ8IZF0 1738 aa15.74■□□□□ 0.11
TNFAIP3-202ENST00000420009 PNPLA6Q8IY17 1366 aa15.74■□□□□ 0.11
TNFAIP3-202ENST00000420009 RGS12O14924 1447 aa15.73■□□□□ 0.11
TNFAIP3-202ENST00000420009 NEXMIFQ5QGS0 1516 aa15.72■□□□□ 0.11
TNFAIP3-202ENST00000420009 LRRC59Q96AG4 307 aaKnown RBP15.71■□□□□ 0.11
TNFAIP3-202ENST00000420009 LAMC1P11047 1609 aa15.71■□□□□ 0.11
TNFAIP3-202ENST00000420009 SRCAPQ6ZRS2 3230 aa15.7■□□□□ 0.1
TNFAIP3-202ENST00000420009 CLTCL1P53675 1640 aa15.69■□□□□ 0.1
TNFAIP3-202ENST00000420009 C1orf167Q5SNV9 1468 aa15.68■□□□□ 0.1
TNFAIP3-202ENST00000420009 DDX17Q92841 729 aaKnown RBP15.68■□□□□ 0.1
TNFAIP3-202ENST00000420009 C8orf37Q96NL8 207 aa15.68■□□□□ 0.1
TNFAIP3-202ENST00000420009 PTCH1Q13635 1447 aa15.68■□□□□ 0.1
TNFAIP3-202ENST00000420009 PRAG1Q86YV5 1406 aa15.68■□□□□ 0.1
TNFAIP3-202ENST00000420009 RBM6P78332 1123 aaKnown RBP15.67■□□□□ 0.1
TNFAIP3-202ENST00000420009 NPM3O75607 178 aaKnown RBP15.66■□□□□ 0.1
TNFAIP3-202ENST00000420009 ZNF326Q5BKZ1 582 aaKnown RBP15.66■□□□□ 0.1
TNFAIP3-202ENST00000420009 QTRT2Q9H974 415 aaKnown RBP15.65■□□□□ 0.1
TNFAIP3-202ENST00000420009 ITGAEP38570 1179 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms