RNA–Protein interactions for RNA: ENST00000419525.5

CENPA-203, Transcript of centromere protein A, humanhuman

TSL 5

Gene CENPA, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-203ENST00000419525 E9PCH4 1651 aa25.53■■□□□ 1.68
CENPA-203ENST00000419525 SENP3Q9H4L4 574 aaPredicted RBP25.53■■□□□ 1.68
CENPA-203ENST00000419525 ZFYVE9O95405 1425 aa25.53■■□□□ 1.68
CENPA-203ENST00000419525 NKTRP30414 1462 aaKnown RBP25.53■■□□□ 1.68
CENPA-203ENST00000419525 IQGAP3Q86VI3 1631 aa25.52■■□□□ 1.68
CENPA-203ENST00000419525 FAM135BQ49AJ0 1406 aa25.5■■□□□ 1.67
CENPA-203ENST00000419525 PHF23Q9BUL5 403 aaPredicted RBP25.5■■□□□ 1.67
CENPA-203ENST00000419525 RIMS2Q9UQ26 1411 aa25.49■■□□□ 1.67
CENPA-203ENST00000419525 PLEKHG1Q9ULL1 1385 aa25.49■■□□□ 1.67
CENPA-203ENST00000419525 PROSER2Q86WR7 435 aaPredicted RBP25.49■■□□□ 1.67
CENPA-203ENST00000419525 BCANQ96GW7 911 aa25.49■■□□□ 1.67
CENPA-203ENST00000419525 CHD2O14647 1828 aaKnown RBP25.49■■□□□ 1.67
CENPA-203ENST00000419525 HDGFP51858 240 aaKnown RBP25.48■■□□□ 1.67
CENPA-203ENST00000419525 PPP1R15AO75807 674 aaPredicted RBP25.45■■□□□ 1.66
CENPA-203ENST00000419525 ROBO1Q9Y6N7 1651 aa25.45■■□□□ 1.66
CENPA-203ENST00000419525 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.42■■□□□ 1.66
CENPA-203ENST00000419525 RBM33Q96EV2 1170 aaKnown RBP25.41■■□□□ 1.66
CENPA-203ENST00000419525 MSH6P52701 1360 aa25.41■■□□□ 1.66
CENPA-203ENST00000419525 CHGAP10645 457 aaKnown RBP25.4■■□□□ 1.66
CENPA-203ENST00000419525 NUP155O75694 1391 aa25.4■■□□□ 1.66
CENPA-203ENST00000419525 TBX22Q9Y458 520 aa25.39■■□□□ 1.66
CENPA-203ENST00000419525 DIP2AQ14689 1571 aa25.39■■□□□ 1.65
CENPA-203ENST00000419525 ITGAEP38570 1179 aa25.37■■□□□ 1.65
CENPA-203ENST00000419525 ADAMTS13Q76LX8 1427 aa25.35■■□□□ 1.65
CENPA-203ENST00000419525 SPHKAPQ2M3C7 1700 aa25.34■■□□□ 1.65
CENPA-203ENST00000419525 NCOA3Q9Y6Q9 1424 aa25.33■■□□□ 1.65
CENPA-203ENST00000419525 PIK3R4Q99570 1358 aa25.32■■□□□ 1.64
CENPA-203ENST00000419525 PPARGC1BQ86YN6 1023 aaKnown RBP25.32■■□□□ 1.64
CENPA-203ENST00000419525 SLAIN2Q9P270 581 aa25.31■■□□□ 1.64
CENPA-203ENST00000419525 PHLPP1O60346 1717 aa25.31■■□□□ 1.64
CENPA-203ENST00000419525 NUTM2DQ5VT03 806 aaPredicted RBP25.3■■□□□ 1.64
CENPA-203ENST00000419525 TRPM2O94759 1503 aa25.29■■□□□ 1.64
CENPA-203ENST00000419525 RGS17Q9UGC6 210 aaPredicted RBP25.28■■□□□ 1.64
CENPA-203ENST00000419525 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.26■■□□□ 1.63
CENPA-203ENST00000419525 C14orf37Q86TY3 774 aa25.24■■□□□ 1.63
CENPA-203ENST00000419525 RRBP1Q9P2E9 1410 aaKnown RBP25.23■■□□□ 1.63
CENPA-203ENST00000419525 NRXN3Q9Y4C0 1643 aa25.23■■□□□ 1.63
CENPA-203ENST00000419525 SETBP1Q9Y6X0 1596 aa25.22■■□□□ 1.63
CENPA-203ENST00000419525 CADPS2Q86UW7 1296 aa25.21■■□□□ 1.63
CENPA-203ENST00000419525 COL16A1Q07092 1604 aaPredicted RBP25.21■■□□□ 1.63
CENPA-203ENST00000419525 JCADQ9P266 1359 aa25.2■■□□□ 1.63
CENPA-203ENST00000419525 C19orf44Q9H6X5 657 aa25.2■■□□□ 1.62
CENPA-203ENST00000419525 PTPRUQ92729 1446 aa25.2■■□□□ 1.62
CENPA-203ENST00000419525 AMOTL2Q9Y2J4 779 aa25.19■■□□□ 1.62
CENPA-203ENST00000419525 XRN1Q8IZH2 1706 aaKnown RBP25.19■■□□□ 1.62
CENPA-203ENST00000419525 CLTCL1P53675 1640 aa25.18■■□□□ 1.62
CENPA-203ENST00000419525 KIF1BO60333 1816 aa25.17■■□□□ 1.62
CENPA-203ENST00000419525 ATF3P18847 181 aa25.17■■□□□ 1.62
CENPA-203ENST00000419525 ZNF326Q5BKZ1 582 aaKnown RBP25.17■■□□□ 1.62
CENPA-203ENST00000419525 NAIPQ13075 1403 aa25.17■■□□□ 1.62
CENPA-203ENST00000419525 AHDC1Q5TGY3 1603 aaPredicted RBP25.16■■□□□ 1.62
CENPA-203ENST00000419525 NEXMIFQ5QGS0 1516 aa25.14■■□□□ 1.62
CENPA-203ENST00000419525 DCCP43146 1447 aa25.13■■□□□ 1.61
CENPA-203ENST00000419525 POTEAQ6S8J7 498 aa25.13■■□□□ 1.61
CENPA-203ENST00000419525 SHPRHQ149N8 1683 aa25.1■■□□□ 1.61
CENPA-203ENST00000419525 METP08581 1390 aa25.08■■□□□ 1.61
CENPA-203ENST00000419525 SPATA31A6Q5VVP1 1343 aa25.08■■□□□ 1.6
CENPA-203ENST00000419525 HFM1A2PYH4 1435 aa25.07■■□□□ 1.6
CENPA-203ENST00000419525 BRINP3Q76B58 766 aa25.05■■□□□ 1.6
CENPA-203ENST00000419525 LRP6O75581 1613 aa25.04■■□□□ 1.6
CENPA-203ENST00000419525 ASXL1Q8IXJ9 1541 aa25.03■■□□□ 1.6
CENPA-203ENST00000419525 MST1RQ04912 1400 aa25.03■■□□□ 1.6
CENPA-203ENST00000419525 NHSL1Q5SYE7 1610 aa25.02■■□□□ 1.6
CENPA-203ENST00000419525 TRIM52Q96A61 297 aa25.02■■□□□ 1.6
CENPA-203ENST00000419525 NALCNQ8IZF0 1738 aa25.02■■□□□ 1.6
CENPA-203ENST00000419525 ADGRL3Q9HAR2 1447 aa25.02■■□□□ 1.6
CENPA-203ENST00000419525 SETD1AO15047 1707 aaKnown RBP25.01■■□□□ 1.59
CENPA-203ENST00000419525 MEX3CQ5U5Q3 659 aaKnown RBP24.99■■□□□ 1.59
CENPA-203ENST00000419525 PPLO60437 1756 aa24.98■■□□□ 1.59
CENPA-203ENST00000419525 VGFO15240 615 aaPredicted RBP24.97■■□□□ 1.59
CENPA-203ENST00000419525 SLC4A1APQ9BWU0 796 aaKnown RBP24.97■■□□□ 1.59
CENPA-203ENST00000419525 SETD5Q9C0A6 1442 aa24.96■■□□□ 1.59
CENPA-203ENST00000419525 RPGRIP1LQ68CZ1 1315 aa24.96■■□□□ 1.59
CENPA-203ENST00000419525 PTCH1Q13635 1447 aa24.95■■□□□ 1.59
CENPA-203ENST00000419525 ZNF772Q68DY9 489 aaPredicted RBP24.94■■□□□ 1.58
CENPA-203ENST00000419525 PRAG1Q86YV5 1406 aa24.92■■□□□ 1.58
CENPA-203ENST00000419525 LRRC59Q96AG4 307 aaKnown RBP24.9■■□□□ 1.58
CENPA-203ENST00000419525 C1orf167Q5SNV9 1468 aa24.89■■□□□ 1.57
CENPA-203ENST00000419525 LAMC1P11047 1609 aa24.88■■□□□ 1.57
CENPA-203ENST00000419525 NUTM2BA6NNL0 878 aaPredicted RBP24.88■■□□□ 1.57
CENPA-203ENST00000419525 NUTM2EB1AL46 878 aaPredicted RBP24.88■■□□□ 1.57
CENPA-203ENST00000419525 NUTM2AQ8IVF1 878 aaPredicted RBP24.88■■□□□ 1.57
CENPA-203ENST00000419525 ROBO2Q9HCK4 1378 aa24.88■■□□□ 1.57
CENPA-203ENST00000419525 DDX17Q92841 729 aaKnown RBP24.84■■□□□ 1.57
CENPA-203ENST00000419525 PNPLA6Q8IY17 1366 aa24.83■■□□□ 1.57
CENPA-203ENST00000419525 FOXD1Q16676 465 aa24.83■■□□□ 1.57
CENPA-203ENST00000419525 CCDC144AA2RUR9 1427 aa24.83■■□□□ 1.57
CENPA-203ENST00000419525 IFT172Q9UG01 1749 aa24.82■■□□□ 1.56
CENPA-203ENST00000419525 RXRBP28702 533 aa24.8■■□□□ 1.56
CENPA-203ENST00000419525 AFF2P51816 1311 aa24.8■■□□□ 1.56
CENPA-203ENST00000419525 CDK12Q9NYV4 1490 aaPredicted RBP24.79■■□□□ 1.56
CENPA-203ENST00000419525 SPATA31E1Q6ZUB1 1445 aa24.78■■□□□ 1.56
CENPA-203ENST00000419525 CDC42BPGQ6DT37 1551 aa24.78■■□□□ 1.56
CENPA-203ENST00000419525 ORAI2Q96SN7 254 aa24.77■■□□□ 1.56
CENPA-203ENST00000419525 ANKRD30BQ9BXX2 1392 aa24.77■■□□□ 1.56
CENPA-203ENST00000419525 MPHOSPH9Q99550 1183 aa24.76■■□□□ 1.55
CENPA-203ENST00000419525 SOS2Q07890 1332 aaPredicted RBP24.76■■□□□ 1.55
CENPA-203ENST00000419525 ADGRF5Q8IZF2 1346 aa24.76■■□□□ 1.55
CENPA-203ENST00000419525 C8orf37Q96NL8 207 aa24.74■■□□□ 1.55
CENPA-203ENST00000419525 TECPR2O15040 1411 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms