RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 CPS1P31327 1500 aa14.44□□□□□ -0.1
CTSA-205ENST00000419493 ZNF326Q5BKZ1 582 aaKnown RBP14.43□□□□□ -0.1
CTSA-205ENST00000419493 RIMS2Q9UQ26 1411 aa14.42□□□□□ -0.1
CTSA-205ENST00000419493 TOM1O60784 492 aa14.42□□□□□ -0.1
CTSA-205ENST00000419493 PIP4K2BP78356 416 aa14.41□□□□□ -0.1
CTSA-205ENST00000419493 MYO5BQ9ULV0 1848 aa14.41□□□□□ -0.1
CTSA-205ENST00000419493 TMEM131LA2VDJ0 1609 aa14.4□□□□□ -0.1
CTSA-205ENST00000419493 KCNA6P17658 529 aa14.38□□□□□ -0.11
CTSA-205ENST00000419493 PROSER2Q86WR7 435 aaPredicted RBP14.38□□□□□ -0.11
CTSA-205ENST00000419493 ZFYVE9O95405 1425 aa14.38□□□□□ -0.11
CTSA-205ENST00000419493 SPHKAPQ2M3C7 1700 aa14.38□□□□□ -0.11
CTSA-205ENST00000419493 PLEKHG1Q9ULL1 1385 aa14.37□□□□□ -0.11
CTSA-205ENST00000419493 FOXD1Q16676 465 aa14.37□□□□□ -0.11
CTSA-205ENST00000419493 MPHOSPH9Q99550 1183 aa14.36□□□□□ -0.11
CTSA-205ENST00000419493 STRCP1A6NGW2 1772 aa14.36□□□□□ -0.11
CTSA-205ENST00000419493 LRRC7Q96NW7 1537 aa14.36□□□□□ -0.11
CTSA-205ENST00000419493 SETD5Q9C0A6 1442 aa14.35□□□□□ -0.11
CTSA-205ENST00000419493 RBM33Q96EV2 1170 aaKnown RBP14.35□□□□□ -0.11
CTSA-205ENST00000419493 TBX22Q9Y458 520 aa14.34□□□□□ -0.11
CTSA-205ENST00000419493 ACIN1Q9UKV3 1341 aaKnown RBP14.34□□□□□ -0.11
CTSA-205ENST00000419493 TRPM2O94759 1503 aa14.32□□□□□ -0.12
CTSA-205ENST00000419493 CLTCL1P53675 1640 aa14.32□□□□□ -0.12
CTSA-205ENST00000419493 TMEM94Q12767 1356 aa14.32□□□□□ -0.12
CTSA-205ENST00000419493 KIF1BO60333 1816 aa14.3□□□□□ -0.12
CTSA-205ENST00000419493 C14orf37Q86TY3 774 aa14.3□□□□□ -0.12
CTSA-205ENST00000419493 VGFO15240 615 aaPredicted RBP14.29□□□□□ -0.12
CTSA-205ENST00000419493 HSPA1LP34931 641 aa14.29□□□□□ -0.12
CTSA-205ENST00000419493 RGL3Q3MIN7 710 aa14.29□□□□□ -0.12
CTSA-205ENST00000419493 RAB3GAP2Q9H2M9 1393 aa14.29□□□□□ -0.12
CTSA-205ENST00000419493 CCDC144AA2RUR9 1427 aa14.28□□□□□ -0.12
CTSA-205ENST00000419493 ADAMTS13Q76LX8 1427 aa14.28□□□□□ -0.12
CTSA-205ENST00000419493 AMOTL2Q9Y2J4 779 aa14.28□□□□□ -0.12
CTSA-205ENST00000419493 NKTRP30414 1462 aaKnown RBP14.26□□□□□ -0.13
CTSA-205ENST00000419493 RPGRIP1LQ68CZ1 1315 aa14.26□□□□□ -0.13
CTSA-205ENST00000419493 MSH6P52701 1360 aa14.25□□□□□ -0.13
CTSA-205ENST00000419493 CHD2O14647 1828 aaKnown RBP14.25□□□□□ -0.13
CTSA-205ENST00000419493 DIP2AQ14689 1571 aa14.25□□□□□ -0.13
CTSA-205ENST00000419493 PIK3R4Q99570 1358 aa14.24□□□□□ -0.13
CTSA-205ENST00000419493 NWD1Q149M9 1564 aa14.24□□□□□ -0.13
CTSA-205ENST00000419493 XIRP1Q702N8 1843 aaKnown RBP14.23□□□□□ -0.13
CTSA-205ENST00000419493 NEXMIFQ5QGS0 1516 aa14.23□□□□□ -0.13
CTSA-205ENST00000419493 DISP3Q9P2K9 1392 aa14.22□□□□□ -0.13
CTSA-205ENST00000419493 METP08581 1390 aa14.22□□□□□ -0.13
CTSA-205ENST00000419493 ATF3P18847 181 aa14.21□□□□□ -0.13
CTSA-205ENST00000419493 ALKQ9UM73 1620 aa14.21□□□□□ -0.13
CTSA-205ENST00000419493 PTPRUQ92729 1446 aa14.21□□□□□ -0.13
CTSA-205ENST00000419493 SETBP1Q9Y6X0 1596 aa14.21□□□□□ -0.14
CTSA-205ENST00000419493 HRCP23327 699 aa14.2□□□□□ -0.14
CTSA-205ENST00000419493 C19orf44Q9H6X5 657 aa14.2□□□□□ -0.14
CTSA-205ENST00000419493 SLAIN2Q9P270 581 aa14.2□□□□□ -0.14
CTSA-205ENST00000419493 NRXN3Q9Y4C0 1643 aa14.19□□□□□ -0.14
CTSA-205ENST00000419493 NCOA3Q9Y6Q9 1424 aa14.18□□□□□ -0.14
CTSA-205ENST00000419493 CADPS2Q86UW7 1296 aa14.18□□□□□ -0.14
CTSA-205ENST00000419493 ADGRF5Q8IZF2 1346 aa14.17□□□□□ -0.14
CTSA-205ENST00000419493 ANKRD30BQ9BXX2 1392 aa14.17□□□□□ -0.14
CTSA-205ENST00000419493 FAM135BQ49AJ0 1406 aa14.16□□□□□ -0.14
CTSA-205ENST00000419493 PPLO60437 1756 aa14.16□□□□□ -0.14
CTSA-205ENST00000419493 SPATA31E1Q6ZUB1 1445 aa14.15□□□□□ -0.14
CTSA-205ENST00000419493 STK26Q9P289 416 aa14.14□□□□□ -0.15
CTSA-205ENST00000419493 ROBO1Q9Y6N7 1651 aa14.13□□□□□ -0.15
CTSA-205ENST00000419493 TMEM132EQ6IEE7 984 aa14.12□□□□□ -0.15
CTSA-205ENST00000419493 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
CTSA-205ENST00000419493 XRN1Q8IZH2 1706 aaKnown RBP14.12□□□□□ -0.15
CTSA-205ENST00000419493 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.12□□□□□ -0.15
CTSA-205ENST00000419493 PHF23Q9BUL5 403 aaPredicted RBP14.11□□□□□ -0.15
CTSA-205ENST00000419493 DCAF11Q8TEB1 546 aa14.1□□□□□ -0.15
CTSA-205ENST00000419493 ROBO2Q9HCK4 1378 aa14.09□□□□□ -0.15
CTSA-205ENST00000419493 CFAP70Q5T0N1 1121 aa14.08□□□□□ -0.16
CTSA-205ENST00000419493 DCCP43146 1447 aa14.07□□□□□ -0.16
CTSA-205ENST00000419493 ADGRL3Q9HAR2 1447 aa14.07□□□□□ -0.16
CTSA-205ENST00000419493 BRINP3Q76B58 766 aa14.07□□□□□ -0.16
CTSA-205ENST00000419493 C14orf93Q9H972 538 aaKnown RBP14.07□□□□□ -0.16
CTSA-205ENST00000419493 SETD1AO15047 1707 aaKnown RBP14.07□□□□□ -0.16
CTSA-205ENST00000419493 IFT172Q9UG01 1749 aa14.07□□□□□ -0.16
CTSA-205ENST00000419493 PIK3C2GO75747 1445 aa14.07□□□□□ -0.16
CTSA-205ENST00000419493 PTCH1Q13635 1447 aa14.07□□□□□ -0.16
CTSA-205ENST00000419493 ILDR2Q71H61 639 aa14.06□□□□□ -0.16
CTSA-205ENST00000419493 WAPLQ7Z5K2 1190 aa14.06□□□□□ -0.16
CTSA-205ENST00000419493 MED1Q15648 1581 aaPredicted RBP14.05□□□□□ -0.16
CTSA-205ENST00000419493 PHLPP1O60346 1717 aa14.05□□□□□ -0.16
CTSA-205ENST00000419493 LRPPRCP42704 1394 aaKnown RBP14.05□□□□□ -0.16
CTSA-205ENST00000419493 DHX57Q6P158 1386 aaKnown RBP14.05□□□□□ -0.16
CTSA-205ENST00000419493 MST1RQ04912 1400 aa14.04□□□□□ -0.16
CTSA-205ENST00000419493 STAC3Q96MF2 364 aa14.03□□□□□ -0.16
CTSA-205ENST00000419493 ABCC11Q96J66 1382 aa14.03□□□□□ -0.16
CTSA-205ENST00000419493 YTHDC2Q9H6S0 1430 aaKnown RBP14.03□□□□□ -0.16
CTSA-205ENST00000419493 MYOM2P54296 1465 aa14.03□□□□□ -0.16
CTSA-205ENST00000419493 NALCNQ8IZF0 1738 aa14.02□□□□□ -0.16
CTSA-205ENST00000419493 JCADQ9P266 1359 aa14.02□□□□□ -0.17
CTSA-205ENST00000419493 NUTM2FA1L443 756 aa14.02□□□□□ -0.17
CTSA-205ENST00000419493 SAFB2Q14151 953 aaKnown RBP eCLIP14.02□□□□□ -0.17
CTSA-205ENST00000419493 TRIM26Q12899 539 aaPredicted RBP14.01□□□□□ -0.17
CTSA-205ENST00000419493 ESCO1Q5FWF5 840 aa14.01□□□□□ -0.17
CTSA-205ENST00000419493 DDX17Q92841 729 aaKnown RBP14.01□□□□□ -0.17
CTSA-205ENST00000419493 ORAI2Q96SN7 254 aa14.01□□□□□ -0.17
CTSA-205ENST00000419493 POGKQ9P215 609 aa14.01□□□□□ -0.17
CTSA-205ENST00000419493 NRXN1Q9ULB1 1477 aa14□□□□□ -0.17
CTSA-205ENST00000419493 TRAK1Q9UPV9 953 aa14□□□□□ -0.17
CTSA-205ENST00000419493 C1orf167Q5SNV9 1468 aa13.99□□□□□ -0.17
CTSA-205ENST00000419493 PRAG1Q86YV5 1406 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms