RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 BECN2A8MW95 431 aa12.27□□□□□ -0.45
LINC00963-202ENST00000419300 ANKRD20A12PQ8NF67 263 aa12.27□□□□□ -0.45
LINC00963-202ENST00000419300 POLA1P09884 1462 aaPredicted RBP12.27□□□□□ -0.45
LINC00963-202ENST00000419300 HMGXB3Q12766 1538 aa12.27□□□□□ -0.45
LINC00963-202ENST00000419300 SENP3-EIF4A1A0A087X0R7 540 aa12.27□□□□□ -0.45
LINC00963-202ENST00000419300 AK7Q96M32 723 aa12.26□□□□□ -0.45
LINC00963-202ENST00000419300 NCOA2Q15596 1464 aa12.26□□□□□ -0.45
LINC00963-202ENST00000419300 WASHC2AQ641Q2 1341 aa12.26□□□□□ -0.45
LINC00963-202ENST00000419300 WASHC2CQ9Y4E1 1318 aa12.26□□□□□ -0.45
LINC00963-202ENST00000419300 MBD3O95983 291 aa12.26□□□□□ -0.45
LINC00963-202ENST00000419300 FGD5Q6ZNL6 1462 aa12.25□□□□□ -0.45
LINC00963-202ENST00000419300 INTS3Q68E01 1043 aaKnown RBP12.25□□□□□ -0.45
LINC00963-202ENST00000419300 IPO7O95373 1038 aaKnown RBP12.24□□□□□ -0.45
LINC00963-202ENST00000419300 NPHP1O15259 732 aa12.24□□□□□ -0.45
LINC00963-202ENST00000419300 FANCD2Q9BXW9 1451 aa12.24□□□□□ -0.45
LINC00963-202ENST00000419300 NFKBIBQ15653 356 aa12.23□□□□□ -0.45
LINC00963-202ENST00000419300 CAVIN1Q6NZI2 390 aaKnown RBP12.23□□□□□ -0.45
LINC00963-202ENST00000419300 EVC2Q86UK5 1308 aa12.23□□□□□ -0.45
LINC00963-202ENST00000419300 GAPVD1Q14C86 1478 aa12.23□□□□□ -0.45
LINC00963-202ENST00000419300 MCM2P49736 904 aa12.23□□□□□ -0.45
LINC00963-202ENST00000419300 CDR1P51861 262 aa12.23□□□□□ -0.45
LINC00963-202ENST00000419300 HFM1A2PYH4 1435 aa12.23□□□□□ -0.45
LINC00963-202ENST00000419300 RNF20Q5VTR2 975 aa12.23□□□□□ -0.45
LINC00963-202ENST00000419300 ZKSCAN1P17029 563 aaPredicted RBP12.23□□□□□ -0.45
LINC00963-202ENST00000419300 CRBNQ96SW2 442 aa12.23□□□□□ -0.45
LINC00963-202ENST00000419300 FAM13BQ9NYF5 915 aa12.23□□□□□ -0.45
LINC00963-202ENST00000419300 FOXD1Q16676 465 aa12.22□□□□□ -0.45
LINC00963-202ENST00000419300 HSP90B2PQ58FF3 399 aa12.22□□□□□ -0.45
LINC00963-202ENST00000419300 SF3A1Q15459 793 aaKnown RBP12.22□□□□□ -0.45
LINC00963-202ENST00000419300 ARAP1Q96P48 1450 aa12.22□□□□□ -0.45
LINC00963-202ENST00000419300 GCC2Q8IWJ2 1684 aa12.21□□□□□ -0.45
LINC00963-202ENST00000419300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC00963-202ENST00000419300 FAM135AQ9P2D6 1515 aa12.21□□□□□ -0.46
LINC00963-202ENST00000419300 A0A0G2JS52 829 aa12.21□□□□□ -0.46
LINC00963-202ENST00000419300 PDIA4P13667 645 aaKnown RBP12.21□□□□□ -0.46
LINC00963-202ENST00000419300 TPD52L1Q16890 204 aaPredicted RBP12.21□□□□□ -0.46
LINC00963-202ENST00000419300 C22orf23Q9BZE7 217 aa12.21□□□□□ -0.46
LINC00963-202ENST00000419300 PLPPR3Q6T4P5 718 aa12.21□□□□□ -0.46
LINC00963-202ENST00000419300 CCDC141Q6ZP82 1450 aa12.2□□□□□ -0.46
LINC00963-202ENST00000419300 CADPSQ9ULU8 1353 aa12.2□□□□□ -0.46
LINC00963-202ENST00000419300 ERCC4Q92889 916 aaPredicted RBP12.2□□□□□ -0.46
LINC00963-202ENST00000419300 PKNOX2Q96KN3 472 aa12.2□□□□□ -0.46
LINC00963-202ENST00000419300 APBB1O00213 710 aa12.2□□□□□ -0.46
LINC00963-202ENST00000419300 NESP48681 1621 aa12.2□□□□□ -0.46
LINC00963-202ENST00000419300 CT47B1P0C2W7 299 aaPredicted RBP12.2□□□□□ -0.46
LINC00963-202ENST00000419300 DNMBPQ6XZF7 1577 aa12.2□□□□□ -0.46
LINC00963-202ENST00000419300 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.19□□□□□ -0.46
LINC00963-202ENST00000419300 CLSTN1O94985 981 aa12.19□□□□□ -0.46
LINC00963-202ENST00000419300 DZIP1LQ8IYY4 767 aaKnown RBP12.19□□□□□ -0.46
LINC00963-202ENST00000419300 FAM184AQ8NB25 1140 aa12.19□□□□□ -0.46
LINC00963-202ENST00000419300 ARHGAP5Q13017 1502 aa12.19□□□□□ -0.46
LINC00963-202ENST00000419300 RASSF8Q8NHQ8 419 aa12.19□□□□□ -0.46
LINC00963-202ENST00000419300 EFCAB2Q5VUJ9 269 aa12.19□□□□□ -0.46
LINC00963-202ENST00000419300 EXOC6Q8TAG9 804 aa12.19□□□□□ -0.46
LINC00963-202ENST00000419300 RUFY1Q96T51 708 aa12.19□□□□□ -0.46
LINC00963-202ENST00000419300 CLUAP1Q96AJ1 413 aa12.19□□□□□ -0.46
LINC00963-202ENST00000419300 DCTN1Q14203 1278 aa12.18□□□□□ -0.46
LINC00963-202ENST00000419300 GORABQ5T7V8 394 aa12.18□□□□□ -0.46
LINC00963-202ENST00000419300 ANKRD45Q5TZF3 282 aa12.18□□□□□ -0.46
LINC00963-202ENST00000419300 WWC1Q8IX03 1113 aa12.18□□□□□ -0.46
LINC00963-202ENST00000419300 CEP89Q96ST8 783 aa12.18□□□□□ -0.46
LINC00963-202ENST00000419300 PDCP20941 246 aa12.18□□□□□ -0.46
LINC00963-202ENST00000419300 PANK3Q9H999 370 aa12.18□□□□□ -0.46
LINC00963-202ENST00000419300 IQGAP2Q13576 1575 aa12.18□□□□□ -0.46
LINC00963-202ENST00000419300 AQRO60306 1485 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC00963-202ENST00000419300 MYO6Q9UM54 1294 aa12.17□□□□□ -0.46
LINC00963-202ENST00000419300 CCDC146Q8IYE0 955 aa12.17□□□□□ -0.46
LINC00963-202ENST00000419300 RUSC2Q8N2Y8 1516 aa12.17□□□□□ -0.46
LINC00963-202ENST00000419300 SASS6Q6UVJ0 657 aa12.17□□□□□ -0.46
LINC00963-202ENST00000419300 RABEP1Q15276 862 aa12.17□□□□□ -0.46
LINC00963-202ENST00000419300 ST20-MTHFSA0A0A6YYL1 179 aa12.16□□□□□ -0.46
LINC00963-202ENST00000419300 HOMER1Q86YM7 354 aa12.16□□□□□ -0.46
LINC00963-202ENST00000419300 RUNDC1Q96C34 613 aa12.16□□□□□ -0.46
LINC00963-202ENST00000419300 API5Q9BZZ5 524 aaKnown RBP12.16□□□□□ -0.46
LINC00963-202ENST00000419300 IFT57Q9NWB7 429 aa12.16□□□□□ -0.46
LINC00963-202ENST00000419300 CDC45O75419 566 aa12.16□□□□□ -0.46
LINC00963-202ENST00000419300 TSPYL1Q9H0U9 437 aa12.15□□□□□ -0.46
LINC00963-202ENST00000419300 CWC22Q9HCG8 908 aaKnown RBP12.15□□□□□ -0.46
LINC00963-202ENST00000419300 KIF1BO60333 1816 aa12.15□□□□□ -0.46
LINC00963-202ENST00000419300 CPLX2Q6PUV4 134 aaKnown RBP12.15□□□□□ -0.46
LINC00963-202ENST00000419300 ERC2O15083 957 aa12.15□□□□□ -0.46
LINC00963-202ENST00000419300 CIZ1Q9ULV3 898 aaPredicted RBP12.15□□□□□ -0.46
LINC00963-202ENST00000419300 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
LINC00963-202ENST00000419300 MNS1Q8NEH6 495 aa12.14□□□□□ -0.47
LINC00963-202ENST00000419300 HSP90AB4PQ58FF6 505 aa12.14□□□□□ -0.47
LINC00963-202ENST00000419300 TSPY26PQ9H489 355 aa12.14□□□□□ -0.47
LINC00963-202ENST00000419300 AK9Q5TCS8 1911 aa12.14□□□□□ -0.47
LINC00963-202ENST00000419300 CCAR2Q8N163 923 aaKnown RBP12.14□□□□□ -0.47
LINC00963-202ENST00000419300 ZNF592Q92610 1267 aa12.13□□□□□ -0.47
LINC00963-202ENST00000419300 TRIM29Q14134 588 aa12.13□□□□□ -0.47
LINC00963-202ENST00000419300 CCDC73Q6ZRK6 1079 aa12.13□□□□□ -0.47
LINC00963-202ENST00000419300 FOXD4L1Q9NU39 408 aa12.13□□□□□ -0.47
LINC00963-202ENST00000419300 PSMA5P28066 241 aa12.13□□□□□ -0.47
LINC00963-202ENST00000419300 AKAP17AQ02040 695 aaKnown RBP12.13□□□□□ -0.47
LINC00963-202ENST00000419300 MCTP1Q6DN14 999 aa12.13□□□□□ -0.47
LINC00963-202ENST00000419300 PLEKHH1Q9ULM0 1364 aa12.13□□□□□ -0.47
LINC00963-202ENST00000419300 KDM5AP29375 1690 aaKnown RBP12.12□□□□□ -0.47
LINC00963-202ENST00000419300 CCDC47Q96A33 483 aaKnown RBP12.12□□□□□ -0.47
LINC00963-202ENST00000419300 PDE3AQ14432 1141 aa12.12□□□□□ -0.47
LINC00963-202ENST00000419300 DAPK1P53355 1430 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms