RNA–Protein interactions for RNA: ENST00000418828.1

SEMA4D-203, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-203ENST00000418828 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.94■■□□□ 1.1
SEMA4D-203ENST00000418828 RIMS2Q9UQ26 1411 aa21.94■■□□□ 1.1
SEMA4D-203ENST00000418828 TMEM131LA2VDJ0 1609 aa21.93■■□□□ 1.1
SEMA4D-203ENST00000418828 E9PCH4 1651 aa21.92■■□□□ 1.1
SEMA4D-203ENST00000418828 PPP1R15AO75807 674 aaPredicted RBP21.9■■□□□ 1.1
SEMA4D-203ENST00000418828 TBX22Q9Y458 520 aa21.9■■□□□ 1.1
SEMA4D-203ENST00000418828 NAIPQ13075 1403 aa21.89■■□□□ 1.1
SEMA4D-203ENST00000418828 TMEM94Q12767 1356 aa21.89■■□□□ 1.1
SEMA4D-203ENST00000418828 ILDR2Q71H61 639 aa21.89■■□□□ 1.09
SEMA4D-203ENST00000418828 CHGAP10645 457 aaKnown RBP21.88■■□□□ 1.09
SEMA4D-203ENST00000418828 BCANQ96GW7 911 aa21.88■■□□□ 1.09
SEMA4D-203ENST00000418828 PROSER2Q86WR7 435 aaPredicted RBP21.87■■□□□ 1.09
SEMA4D-203ENST00000418828 NKTRP30414 1462 aaKnown RBP21.87■■□□□ 1.09
SEMA4D-203ENST00000418828 NWD1Q149M9 1564 aa21.85■■□□□ 1.09
SEMA4D-203ENST00000418828 HFM1A2PYH4 1435 aa21.84■■□□□ 1.09
SEMA4D-203ENST00000418828 FAM135BQ49AJ0 1406 aa21.83■■□□□ 1.09
SEMA4D-203ENST00000418828 ADAMTS13Q76LX8 1427 aa21.82■■□□□ 1.08
SEMA4D-203ENST00000418828 PIK3R4Q99570 1358 aa21.82■■□□□ 1.08
SEMA4D-203ENST00000418828 XIRP1Q702N8 1843 aaKnown RBP21.8■■□□□ 1.08
SEMA4D-203ENST00000418828 NCOA3Q9Y6Q9 1424 aa21.8■■□□□ 1.08
SEMA4D-203ENST00000418828 NUTM2DQ5VT03 806 aaPredicted RBP21.78■■□□□ 1.08
SEMA4D-203ENST00000418828 RBM33Q96EV2 1170 aaKnown RBP21.78■■□□□ 1.08
SEMA4D-203ENST00000418828 MYO5BQ9ULV0 1848 aa21.78■■□□□ 1.08
SEMA4D-203ENST00000418828 DIP2AQ14689 1571 aa21.77■■□□□ 1.08
SEMA4D-203ENST00000418828 MSH6P52701 1360 aa21.76■■□□□ 1.07
SEMA4D-203ENST00000418828 SOCS7O14512 581 aa21.76■■□□□ 1.07
SEMA4D-203ENST00000418828 SENP3Q9H4L4 574 aaPredicted RBP21.76■■□□□ 1.07
SEMA4D-203ENST00000418828 MED1Q15648 1581 aaPredicted RBP21.74■■□□□ 1.07
SEMA4D-203ENST00000418828 SPHKAPQ2M3C7 1700 aa21.73■■□□□ 1.07
SEMA4D-203ENST00000418828 TRIM52Q96A61 297 aa21.73■■□□□ 1.07
SEMA4D-203ENST00000418828 TRPM2O94759 1503 aa21.73■■□□□ 1.07
SEMA4D-203ENST00000418828 CHD2O14647 1828 aaKnown RBP21.72■■□□□ 1.07
SEMA4D-203ENST00000418828 ZNF326Q5BKZ1 582 aaKnown RBP21.72■■□□□ 1.07
SEMA4D-203ENST00000418828 SLAIN2Q9P270 581 aa21.72■■□□□ 1.07
SEMA4D-203ENST00000418828 SLC4A1APQ9BWU0 796 aaKnown RBP21.71■■□□□ 1.07
SEMA4D-203ENST00000418828 AMOTL2Q9Y2J4 779 aa21.7■■□□□ 1.06
SEMA4D-203ENST00000418828 C19orf44Q9H6X5 657 aa21.69■■□□□ 1.06
SEMA4D-203ENST00000418828 SETBP1Q9Y6X0 1596 aa21.69■■□□□ 1.06
SEMA4D-203ENST00000418828 PTPRUQ92729 1446 aa21.68■■□□□ 1.06
SEMA4D-203ENST00000418828 CLTCL1P53675 1640 aa21.67■■□□□ 1.06
SEMA4D-203ENST00000418828 CADPS2Q86UW7 1296 aa21.66■■□□□ 1.06
SEMA4D-203ENST00000418828 NEXMIFQ5QGS0 1516 aa21.65■■□□□ 1.06
SEMA4D-203ENST00000418828 RPGRIP1LQ68CZ1 1315 aa21.64■■□□□ 1.05
SEMA4D-203ENST00000418828 NRXN3Q9Y4C0 1643 aa21.64■■□□□ 1.05
SEMA4D-203ENST00000418828 METP08581 1390 aa21.63■■□□□ 1.05
SEMA4D-203ENST00000418828 ACIN1Q9UKV3 1341 aaKnown RBP21.63■■□□□ 1.05
SEMA4D-203ENST00000418828 VGFO15240 615 aaPredicted RBP21.63■■□□□ 1.05
SEMA4D-203ENST00000418828 C14orf37Q86TY3 774 aa21.63■■□□□ 1.05
SEMA4D-203ENST00000418828 ROBO1Q9Y6N7 1651 aa21.62■■□□□ 1.05
SEMA4D-203ENST00000418828 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
SEMA4D-203ENST00000418828 ATF3P18847 181 aa21.6■■□□□ 1.05
SEMA4D-203ENST00000418828 DCCP43146 1447 aa21.59■■□□□ 1.05
SEMA4D-203ENST00000418828 MPHOSPH9Q99550 1183 aa21.58■■□□□ 1.05
SEMA4D-203ENST00000418828 XRN1Q8IZH2 1706 aaKnown RBP21.57■■□□□ 1.04
SEMA4D-203ENST00000418828 FOXD1Q16676 465 aa21.55■■□□□ 1.04
SEMA4D-203ENST00000418828 RGS17Q9UGC6 210 aaPredicted RBP21.54■■□□□ 1.04
SEMA4D-203ENST00000418828 KIF1BO60333 1816 aa21.54■■□□□ 1.04
SEMA4D-203ENST00000418828 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.54■■□□□ 1.04
SEMA4D-203ENST00000418828 JCADQ9P266 1359 aa21.53■■□□□ 1.04
SEMA4D-203ENST00000418828 CCDC144AA2RUR9 1427 aa21.52■■□□□ 1.04
SEMA4D-203ENST00000418828 PRAG1Q86YV5 1406 aa21.52■■□□□ 1.04
SEMA4D-203ENST00000418828 BRINP3Q76B58 766 aa21.51■■□□□ 1.03
SEMA4D-203ENST00000418828 SETD5Q9C0A6 1442 aa21.51■■□□□ 1.03
SEMA4D-203ENST00000418828 PTCH1Q13635 1447 aa21.49■■□□□ 1.03
SEMA4D-203ENST00000418828 SPATA31E1Q6ZUB1 1445 aa21.49■■□□□ 1.03
SEMA4D-203ENST00000418828 ADGRL3Q9HAR2 1447 aa21.49■■□□□ 1.03
SEMA4D-203ENST00000418828 AHDC1Q5TGY3 1603 aaPredicted RBP21.47■■□□□ 1.03
SEMA4D-203ENST00000418828 MST1RQ04912 1400 aa21.47■■□□□ 1.03
SEMA4D-203ENST00000418828 COL16A1Q07092 1604 aaPredicted RBP21.47■■□□□ 1.03
SEMA4D-203ENST00000418828 ANKRD30BQ9BXX2 1392 aa21.47■■□□□ 1.03
SEMA4D-203ENST00000418828 SPATA31A6Q5VVP1 1343 aa21.46■■□□□ 1.03
SEMA4D-203ENST00000418828 PHLPP1O60346 1717 aa21.46■■□□□ 1.03
SEMA4D-203ENST00000418828 ROBO2Q9HCK4 1378 aa21.45■■□□□ 1.02
SEMA4D-203ENST00000418828 ADGRF5Q8IZF2 1346 aa21.44■■□□□ 1.02
SEMA4D-203ENST00000418828 RGL3Q3MIN7 710 aa21.43■■□□□ 1.02
SEMA4D-203ENST00000418828 SETD1AO15047 1707 aaKnown RBP21.43■■□□□ 1.02
SEMA4D-203ENST00000418828 PPLO60437 1756 aa21.41■■□□□ 1.02
SEMA4D-203ENST00000418828 ASXL1Q8IXJ9 1541 aa21.41■■□□□ 1.02
SEMA4D-203ENST00000418828 RAB3GAP2Q9H2M9 1393 aa21.41■■□□□ 1.02
SEMA4D-203ENST00000418828 POTEAQ6S8J7 498 aa21.4■■□□□ 1.02
SEMA4D-203ENST00000418828 HRCP23327 699 aa21.39■■□□□ 1.01
SEMA4D-203ENST00000418828 C1orf167Q5SNV9 1468 aa21.38■■□□□ 1.01
SEMA4D-203ENST00000418828 LRRC59Q96AG4 307 aaKnown RBP21.37■■□□□ 1.01
SEMA4D-203ENST00000418828 TECPR2O15040 1411 aa21.37■■□□□ 1.01
SEMA4D-203ENST00000418828 PIK3C2GO75747 1445 aa21.36■■□□□ 1.01
SEMA4D-203ENST00000418828 LRPPRCP42704 1394 aaKnown RBP21.36■■□□□ 1.01
SEMA4D-203ENST00000418828 ABCC11Q96J66 1382 aa21.36■■□□□ 1.01
SEMA4D-203ENST00000418828 NALCNQ8IZF0 1738 aa21.35■■□□□ 1.01
SEMA4D-203ENST00000418828 LRP6O75581 1613 aa21.34■■□□□ 1.01
SEMA4D-203ENST00000418828 SHPRHQ149N8 1683 aa21.32■■□□□ 1
SEMA4D-203ENST00000418828 SIRT1Q96EB6 747 aa21.32■■□□□ 1
SEMA4D-203ENST00000418828 C14orf93Q9H972 538 aaKnown RBP21.32■■□□□ 1
SEMA4D-203ENST00000418828 NRXN1Q9ULB1 1477 aa21.32■■□□□ 1
SEMA4D-203ENST00000418828 ORAI2Q96SN7 254 aa21.31■■□□□ 1
SEMA4D-203ENST00000418828 NHSL1Q5SYE7 1610 aa21.3■■□□□ 1
SEMA4D-203ENST00000418828 IFT172Q9UG01 1749 aa21.3■■□□□ 1
SEMA4D-203ENST00000418828 TMEM132EQ6IEE7 984 aa21.3■■□□□ 1
SEMA4D-203ENST00000418828 DDX17Q92841 729 aaKnown RBP21.3■■□□□ 1
SEMA4D-203ENST00000418828 SOS2Q07890 1332 aaPredicted RBP21.29■■□□□ 1
SEMA4D-203ENST00000418828 MYOM2P54296 1465 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms