RNA–Protein interactions for RNA: ENST00000418511.6

TMEM253-201, Transcript of transmembrane protein 253, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TMEM253, Length 1,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-201ENST00000418511 RIMS2Q9UQ26 1411 aa17.95■□□□□ 0.46
TMEM253-201ENST00000418511 IFT172Q9UG01 1749 aa17.95■□□□□ 0.46
TMEM253-201ENST00000418511 LTKP29376 864 aa17.95■□□□□ 0.46
TMEM253-201ENST00000418511 ZNF326Q5BKZ1 582 aaKnown RBP17.95■□□□□ 0.46
TMEM253-201ENST00000418511 NUTM2DQ5VT03 806 aaPredicted RBP17.95■□□□□ 0.46
TMEM253-201ENST00000418511 SCAF11Q99590 1463 aaKnown RBP17.94■□□□□ 0.46
TMEM253-201ENST00000418511 LTBP4Q8N2S1 1624 aa17.94■□□□□ 0.46
TMEM253-201ENST00000418511 RGL3Q3MIN7 710 aa17.93■□□□□ 0.46
TMEM253-201ENST00000418511 TXNDC2Q86VQ3 553 aa17.93■□□□□ 0.46
TMEM253-201ENST00000418511 SIN3AQ96ST3 1273 aa17.93■□□□□ 0.46
TMEM253-201ENST00000418511 IQGAP1P46940 1657 aa17.93■□□□□ 0.46
TMEM253-201ENST00000418511 ANKLE2Q86XL3 938 aa17.93■□□□□ 0.46
TMEM253-201ENST00000418511 CERKQ8TCT0 537 aa17.93■□□□□ 0.46
TMEM253-201ENST00000418511 SENP3Q9H4L4 574 aaPredicted RBP17.93■□□□□ 0.46
TMEM253-201ENST00000418511 SLC24A1O60721 1099 aa17.91■□□□□ 0.46
TMEM253-201ENST00000418511 EID1Q9Y6B2 187 aa17.9■□□□□ 0.46
TMEM253-201ENST00000418511 MED14O60244 1454 aa17.89■□□□□ 0.46
TMEM253-201ENST00000418511 NPHP4O75161 1426 aaPredicted RBP17.89■□□□□ 0.46
TMEM253-201ENST00000418511 NEUROD1Q13562 356 aa17.88■□□□□ 0.45
TMEM253-201ENST00000418511 PPP1R15AO75807 674 aaPredicted RBP17.88■□□□□ 0.45
TMEM253-201ENST00000418511 NRXN3Q9Y4C0 1643 aa17.86■□□□□ 0.45
TMEM253-201ENST00000418511 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.86■□□□□ 0.45
TMEM253-201ENST00000418511 CCER1Q8TC90 406 aaPredicted RBP17.86■□□□□ 0.45
TMEM253-201ENST00000418511 PLEKHG1Q9ULL1 1385 aa17.85■□□□□ 0.45
TMEM253-201ENST00000418511 RPGRIP1LQ68CZ1 1315 aa17.84■□□□□ 0.45
TMEM253-201ENST00000418511 HDGFP51858 240 aaKnown RBP17.84■□□□□ 0.45
TMEM253-201ENST00000418511 BCANQ96GW7 911 aa17.82■□□□□ 0.44
TMEM253-201ENST00000418511 SETBP1Q9Y6X0 1596 aa17.82■□□□□ 0.44
TMEM253-201ENST00000418511 ADGRF5Q8IZF2 1346 aa17.82■□□□□ 0.44
TMEM253-201ENST00000418511 ZNF335Q9H4Z2 1342 aaPredicted RBP17.81■□□□□ 0.44
TMEM253-201ENST00000418511 SETD1AO15047 1707 aaKnown RBP17.81■□□□□ 0.44
TMEM253-201ENST00000418511 SLC26A8Q96RN1 970 aa17.81■□□□□ 0.44
TMEM253-201ENST00000418511 MYOM2P54296 1465 aa17.81■□□□□ 0.44
TMEM253-201ENST00000418511 IQSEC2Q5JU85 1478 aa17.81■□□□□ 0.44
TMEM253-201ENST00000418511 ADAMTS13Q76LX8 1427 aa17.8■□□□□ 0.44
TMEM253-201ENST00000418511 VGFO15240 615 aaPredicted RBP17.8■□□□□ 0.44
TMEM253-201ENST00000418511 DCAF11Q8TEB1 546 aa17.8■□□□□ 0.44
TMEM253-201ENST00000418511 KDM2AQ9Y2K7 1162 aa17.8■□□□□ 0.44
TMEM253-201ENST00000418511 STRCP1A6NGW2 1772 aa17.79■□□□□ 0.44
TMEM253-201ENST00000418511 L3MBTL2Q969R5 705 aa17.78■□□□□ 0.44
TMEM253-201ENST00000418511 NRXN1Q9ULB1 1477 aa17.78■□□□□ 0.44
TMEM253-201ENST00000418511 PIK3C2GO75747 1445 aa17.77■□□□□ 0.44
TMEM253-201ENST00000418511 DIP2AQ14689 1571 aa17.77■□□□□ 0.44
TMEM253-201ENST00000418511 CLSPNQ9HAW4 1339 aa17.77■□□□□ 0.44
TMEM253-201ENST00000418511 ALKQ9UM73 1620 aa17.77■□□□□ 0.44
TMEM253-201ENST00000418511 CHD2O14647 1828 aaKnown RBP17.75■□□□□ 0.43
TMEM253-201ENST00000418511 TONSLQ96HA7 1378 aa17.75■□□□□ 0.43
TMEM253-201ENST00000418511 LAMC1P11047 1609 aa17.72■□□□□ 0.43
TMEM253-201ENST00000418511 ASXL1Q8IXJ9 1541 aa17.72■□□□□ 0.43
TMEM253-201ENST00000418511 TBX22Q9Y458 520 aa17.72■□□□□ 0.43
TMEM253-201ENST00000418511 METP08581 1390 aa17.71■□□□□ 0.43
TMEM253-201ENST00000418511 PRAG1Q86YV5 1406 aa17.71■□□□□ 0.43
TMEM253-201ENST00000418511 NWD1Q149M9 1564 aa17.71■□□□□ 0.42
TMEM253-201ENST00000418511 CFAP70Q5T0N1 1121 aa17.7■□□□□ 0.42
TMEM253-201ENST00000418511 PTPRUQ92729 1446 aa17.7■□□□□ 0.42
TMEM253-201ENST00000418511 CPS1P31327 1500 aa17.7■□□□□ 0.42
TMEM253-201ENST00000418511 XRN1Q8IZH2 1706 aaKnown RBP17.69■□□□□ 0.42
TMEM253-201ENST00000418511 KIAA1210Q9ULL0 1709 aa17.68■□□□□ 0.42
TMEM253-201ENST00000418511 STAC3Q96MF2 364 aa17.67■□□□□ 0.42
TMEM253-201ENST00000418511 C14orf93Q9H972 538 aaKnown RBP17.67■□□□□ 0.42
TMEM253-201ENST00000418511 TRPM1Q7Z4N2 1603 aa17.67■□□□□ 0.42
TMEM253-201ENST00000418511 TMEM132EQ6IEE7 984 aa17.67■□□□□ 0.42
TMEM253-201ENST00000418511 PIK3R4Q99570 1358 aa17.66■□□□□ 0.42
TMEM253-201ENST00000418511 XIRP1Q702N8 1843 aaKnown RBP17.66■□□□□ 0.42
TMEM253-201ENST00000418511 ADGRB1O14514 1584 aa17.65■□□□□ 0.42
TMEM253-201ENST00000418511 KCNA6P17658 529 aa17.65■□□□□ 0.42
TMEM253-201ENST00000418511 NBPF8Q3BBV2 869 aa17.65■□□□□ 0.42
TMEM253-201ENST00000418511 AMOTL2Q9Y2J4 779 aa17.63■□□□□ 0.41
TMEM253-201ENST00000418511 KNDC1Q76NI1 1749 aa17.63■□□□□ 0.41
TMEM253-201ENST00000418511 NKTRP30414 1462 aaKnown RBP17.63■□□□□ 0.41
TMEM253-201ENST00000418511 LRRC7Q96NW7 1537 aa17.61■□□□□ 0.41
TMEM253-201ENST00000418511 YTHDC2Q9H6S0 1430 aaKnown RBP17.61■□□□□ 0.41
TMEM253-201ENST00000418511 NBPF1Q3BBV0 1214 aa17.61■□□□□ 0.41
TMEM253-201ENST00000418511 RBM33Q96EV2 1170 aaKnown RBP17.61■□□□□ 0.41
TMEM253-201ENST00000418511 STK26Q9P289 416 aa17.61■□□□□ 0.41
TMEM253-201ENST00000418511 LRPPRCP42704 1394 aaKnown RBP17.59■□□□□ 0.41
TMEM253-201ENST00000418511 ROBO2Q9HCK4 1378 aa17.58■□□□□ 0.41
TMEM253-201ENST00000418511 TIMELESSQ9UNS1 1208 aa17.58■□□□□ 0.41
TMEM253-201ENST00000418511 ARHGEF28Q8N1W1 1705 aaKnown RBP17.58■□□□□ 0.4
TMEM253-201ENST00000418511 UBAP1LF5GYI3 381 aa17.57■□□□□ 0.4
TMEM253-201ENST00000418511 PROSER2Q86WR7 435 aaPredicted RBP17.57■□□□□ 0.4
TMEM253-201ENST00000418511 RALGAPBQ86X10 1494 aa17.57■□□□□ 0.4
TMEM253-201ENST00000418511 TMEM94Q12767 1356 aa17.57■□□□□ 0.4
TMEM253-201ENST00000418511 TECPR2O15040 1411 aa17.56■□□□□ 0.4
TMEM253-201ENST00000418511 PTCH1Q13635 1447 aa17.56■□□□□ 0.4
TMEM253-201ENST00000418511 NALCNQ8IZF0 1738 aa17.56■□□□□ 0.4
TMEM253-201ENST00000418511 ROCK2O75116 1388 aaKnown RBP17.55■□□□□ 0.4
TMEM253-201ENST00000418511 ABCC11Q96J66 1382 aa17.55■□□□□ 0.4
TMEM253-201ENST00000418511 TRAK1Q9UPV9 953 aa17.54■□□□□ 0.4
TMEM253-201ENST00000418511 PLEKHH1Q9ULM0 1364 aa17.54■□□□□ 0.4
TMEM253-201ENST00000418511 DLC1Q96QB1 1528 aa17.53■□□□□ 0.4
TMEM253-201ENST00000418511 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.53■□□□□ 0.4
TMEM253-201ENST00000418511 WAPLQ7Z5K2 1190 aa17.52■□□□□ 0.4
TMEM253-201ENST00000418511 GPRASP1Q5JY77 1395 aa17.51■□□□□ 0.39
TMEM253-201ENST00000418511 FAM135BQ49AJ0 1406 aa17.5■□□□□ 0.39
TMEM253-201ENST00000418511 SAFB2Q14151 953 aaKnown RBP eCLIP17.49■□□□□ 0.39
TMEM253-201ENST00000418511 C14orf37Q86TY3 774 aa17.49■□□□□ 0.39
TMEM253-201ENST00000418511 PRAM1Q96QH2 718 aa17.49■□□□□ 0.39
TMEM253-201ENST00000418511 CARD11Q9BXL7 1154 aa17.48■□□□□ 0.39
TMEM253-201ENST00000418511 QRICH2Q9H0J4 1663 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms