RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 SCAF11Q99590 1463 aaKnown RBP10.07□□□□□ -0.8
NCL-203ENST00000417652 CERKQ8TCT0 537 aa10.07□□□□□ -0.8
NCL-203ENST00000417652 POLR1AO95602 1720 aaPredicted RBP10.07□□□□□ -0.8
NCL-203ENST00000417652 ADGRB3O60242 1522 aa10.07□□□□□ -0.8
NCL-203ENST00000417652 CCDC144AA2RUR9 1427 aa10.07□□□□□ -0.8
NCL-203ENST00000417652 RIMS2Q9UQ26 1411 aa10.07□□□□□ -0.8
NCL-203ENST00000417652 ZNF335Q9H4Z2 1342 aaPredicted RBP10.07□□□□□ -0.8
NCL-203ENST00000417652 SLC26A8Q96RN1 970 aa10.06□□□□□ -0.8
NCL-203ENST00000417652 MYO5BQ9ULV0 1848 aa10.05□□□□□ -0.8
NCL-203ENST00000417652 SLIT1O75093 1534 aa10.05□□□□□ -0.8
NCL-203ENST00000417652 KIF1BO60333 1816 aa10.05□□□□□ -0.8
NCL-203ENST00000417652 TRPM2O94759 1503 aa10.04□□□□□ -0.8
NCL-203ENST00000417652 KDM5AP29375 1690 aaKnown RBP10.04□□□□□ -0.8
NCL-203ENST00000417652 VGFO15240 615 aaPredicted RBP10.04□□□□□ -0.8
NCL-203ENST00000417652 ARHGAP23Q9P227 1491 aa10.04□□□□□ -0.8
NCL-203ENST00000417652 TMEM131LA2VDJ0 1609 aa10.04□□□□□ -0.8
NCL-203ENST00000417652 MED14O60244 1454 aa10.03□□□□□ -0.8
NCL-203ENST00000417652 RPGRIP1LQ68CZ1 1315 aa10.03□□□□□ -0.8
NCL-203ENST00000417652 IQGAP1P46940 1657 aa10.02□□□□□ -0.8
NCL-203ENST00000417652 PCGF6Q9BYE7 350 aa10.02□□□□□ -0.81
NCL-203ENST00000417652 CLTCL1P53675 1640 aa10.02□□□□□ -0.81
NCL-203ENST00000417652 PLEKHG1Q9ULL1 1385 aa10.01□□□□□ -0.81
NCL-203ENST00000417652 NEURL4Q96JN8 1562 aa10.01□□□□□ -0.81
NCL-203ENST00000417652 PROSER2Q86WR7 435 aaPredicted RBP10.01□□□□□ -0.81
NCL-203ENST00000417652 KCNA6P17658 529 aa10□□□□□ -0.81
NCL-203ENST00000417652 C14orf37Q86TY3 774 aa10□□□□□ -0.81
NCL-203ENST00000417652 TBX22Q9Y458 520 aa10□□□□□ -0.81
NCL-203ENST00000417652 ZFYVE9O95405 1425 aa9.99□□□□□ -0.81
NCL-203ENST00000417652 UBAP1LF5GYI3 381 aa9.99□□□□□ -0.81
NCL-203ENST00000417652 FBXO41Q8TF61 875 aa9.99□□□□□ -0.81
NCL-203ENST00000417652 KDM2AQ9Y2K7 1162 aa9.99□□□□□ -0.81
NCL-203ENST00000417652 NEUROD1Q13562 356 aa9.98□□□□□ -0.81
NCL-203ENST00000417652 ANKRD30BQ9BXX2 1392 aa9.98□□□□□ -0.81
NCL-203ENST00000417652 TOM1O60784 492 aa9.97□□□□□ -0.81
NCL-203ENST00000417652 DCAF11Q8TEB1 546 aa9.97□□□□□ -0.81
NCL-203ENST00000417652 CPS1P31327 1500 aa9.97□□□□□ -0.81
NCL-203ENST00000417652 ILDR1Q86SU0 546 aaPredicted RBP9.96□□□□□ -0.82
NCL-203ENST00000417652 RBM33Q96EV2 1170 aaKnown RBP9.96□□□□□ -0.82
NCL-203ENST00000417652 AMOTL2Q9Y2J4 779 aa9.96□□□□□ -0.82
NCL-203ENST00000417652 PIP4K2BP78356 416 aa9.95□□□□□ -0.82
NCL-203ENST00000417652 LTBP4Q8N2S1 1624 aa9.95□□□□□ -0.82
NCL-203ENST00000417652 ADGRF5Q8IZF2 1346 aa9.94□□□□□ -0.82
NCL-203ENST00000417652 NEXMIFQ5QGS0 1516 aa9.93□□□□□ -0.82
NCL-203ENST00000417652 SPATA31E1Q6ZUB1 1445 aa9.93□□□□□ -0.82
NCL-203ENST00000417652 STAC3Q96MF2 364 aa9.93□□□□□ -0.82
NCL-203ENST00000417652 SIN3AQ96ST3 1273 aa9.93□□□□□ -0.82
NCL-203ENST00000417652 STK26Q9P289 416 aa9.93□□□□□ -0.82
NCL-203ENST00000417652 ADAMTS13Q76LX8 1427 aa9.92□□□□□ -0.82
NCL-203ENST00000417652 PIK3R4Q99570 1358 aa9.92□□□□□ -0.82
NCL-203ENST00000417652 DIP2AQ14689 1571 aa9.92□□□□□ -0.82
NCL-203ENST00000417652 PPLO60437 1756 aa9.91□□□□□ -0.82
NCL-203ENST00000417652 METP08581 1390 aa9.91□□□□□ -0.82
NCL-203ENST00000417652 TMEM94Q12767 1356 aa9.91□□□□□ -0.82
NCL-203ENST00000417652 ATF3P18847 181 aa9.91□□□□□ -0.82
NCL-203ENST00000417652 LRRC7Q96NW7 1537 aa9.91□□□□□ -0.82
NCL-203ENST00000417652 IQSEC2Q5JU85 1478 aa9.91□□□□□ -0.82
NCL-203ENST00000417652 MSH6P52701 1360 aa9.9□□□□□ -0.82
NCL-203ENST00000417652 DHX57Q6P158 1386 aaKnown RBP9.9□□□□□ -0.82
NCL-203ENST00000417652 DCAF8L1A6NGE4 600 aa9.9□□□□□ -0.82
NCL-203ENST00000417652 CFAP70Q5T0N1 1121 aa9.9□□□□□ -0.82
NCL-203ENST00000417652 TMEM132EQ6IEE7 984 aa9.9□□□□□ -0.82
NCL-203ENST00000417652 CHD2O14647 1828 aaKnown RBP9.9□□□□□ -0.82
NCL-203ENST00000417652 STRCP1A6NGW2 1772 aa9.9□□□□□ -0.82
NCL-203ENST00000417652 SETBP1Q9Y6X0 1596 aa9.89□□□□□ -0.83
NCL-203ENST00000417652 CCER1Q8TC90 406 aaPredicted RBP9.89□□□□□ -0.83
NCL-203ENST00000417652 C19orf44Q9H6X5 657 aa9.89□□□□□ -0.83
NCL-203ENST00000417652 C14orf93Q9H972 538 aaKnown RBP9.89□□□□□ -0.83
NCL-203ENST00000417652 ALKQ9UM73 1620 aa9.89□□□□□ -0.83
NCL-203ENST00000417652 NKTRP30414 1462 aaKnown RBP9.88□□□□□ -0.83
NCL-203ENST00000417652 CADPS2Q86UW7 1296 aa9.87□□□□□ -0.83
NCL-203ENST00000417652 L3MBTL2Q969R5 705 aa9.87□□□□□ -0.83
NCL-203ENST00000417652 POGKQ9P215 609 aa9.87□□□□□ -0.83
NCL-203ENST00000417652 PTPRUQ92729 1446 aa9.87□□□□□ -0.83
NCL-203ENST00000417652 TONSLQ96HA7 1378 aa9.87□□□□□ -0.83
NCL-203ENST00000417652 SLAIN2Q9P270 581 aa9.86□□□□□ -0.83
NCL-203ENST00000417652 NRXN3Q9Y4C0 1643 aa9.85□□□□□ -0.83
NCL-203ENST00000417652 MYOM2P54296 1465 aa9.85□□□□□ -0.83
NCL-203ENST00000417652 PIK3C2GO75747 1445 aa9.85□□□□□ -0.83
NCL-203ENST00000417652 SAFB2Q14151 953 aaKnown RBP eCLIP9.85□□□□□ -0.83
NCL-203ENST00000417652 TRAK1Q9UPV9 953 aa9.85□□□□□ -0.83
NCL-203ENST00000417652 IFT172Q9UG01 1749 aa9.85□□□□□ -0.83
NCL-203ENST00000417652 NWD1Q149M9 1564 aa9.84□□□□□ -0.83
NCL-203ENST00000417652 NCOA3Q9Y6Q9 1424 aa9.84□□□□□ -0.83
NCL-203ENST00000417652 WAPLQ7Z5K2 1190 aa9.84□□□□□ -0.83
NCL-203ENST00000417652 LRPPRCP42704 1394 aaKnown RBP9.84□□□□□ -0.83
NCL-203ENST00000417652 ROBO2Q9HCK4 1378 aa9.83□□□□□ -0.84
NCL-203ENST00000417652 YTHDC2Q9H6S0 1430 aaKnown RBP9.82□□□□□ -0.84
NCL-203ENST00000417652 PRAM1Q96QH2 718 aa9.82□□□□□ -0.84
NCL-203ENST00000417652 ABCC11Q96J66 1382 aa9.82□□□□□ -0.84
NCL-203ENST00000417652 XIRP1Q702N8 1843 aaKnown RBP9.82□□□□□ -0.84
NCL-203ENST00000417652 NRXN1Q9ULB1 1477 aa9.81□□□□□ -0.84
NCL-203ENST00000417652 HSPA1LP34931 641 aa9.81□□□□□ -0.84
NCL-203ENST00000417652 SIRT1Q96EB6 747 aa9.81□□□□□ -0.84
NCL-203ENST00000417652 LAMC1P11047 1609 aa9.81□□□□□ -0.84
NCL-203ENST00000417652 XRN1Q8IZH2 1706 aaKnown RBP9.8□□□□□ -0.84
NCL-203ENST00000417652 NUTM2FA1L443 756 aa9.8□□□□□ -0.84
NCL-203ENST00000417652 PTCH1Q13635 1447 aa9.8□□□□□ -0.84
NCL-203ENST00000417652 NBPF1Q3BBV0 1214 aa9.79□□□□□ -0.84
NCL-203ENST00000417652 ADGRL3Q9HAR2 1447 aa9.79□□□□□ -0.84
NCL-203ENST00000417652 MINK1Q8N4C8 1332 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms