RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 LMTK3Q96Q04 1460 aa18.7■□□□□ 0.58
SEC22C-205ENST00000417572 HDGFP51858 240 aaKnown RBP18.7■□□□□ 0.58
SEC22C-205ENST00000417572 HSPA2P54652 639 aa18.7■□□□□ 0.58
SEC22C-205ENST00000417572 LTKP29376 864 aa18.69■□□□□ 0.58
SEC22C-205ENST00000417572 AEBP2Q6ZN18 517 aaPredicted RBP18.69■□□□□ 0.58
SEC22C-205ENST00000417572 TXNDC2Q86VQ3 553 aa18.69■□□□□ 0.58
SEC22C-205ENST00000417572 ZFYVE9O95405 1425 aa18.69■□□□□ 0.58
SEC22C-205ENST00000417572 VGFO15240 615 aaPredicted RBP18.69■□□□□ 0.58
SEC22C-205ENST00000417572 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.69■□□□□ 0.58
SEC22C-205ENST00000417572 NEXMIFQ5QGS0 1516 aa18.68■□□□□ 0.58
SEC22C-205ENST00000417572 ARHGAP23Q9P227 1491 aa18.68■□□□□ 0.58
SEC22C-205ENST00000417572 STAC3Q96MF2 364 aa18.68■□□□□ 0.58
SEC22C-205ENST00000417572 EID1Q9Y6B2 187 aa18.68■□□□□ 0.58
SEC22C-205ENST00000417572 ADGRF5Q8IZF2 1346 aa18.67■□□□□ 0.58
SEC22C-205ENST00000417572 SLIT1O75093 1534 aa18.67■□□□□ 0.58
SEC22C-205ENST00000417572 PPP1R15AO75807 674 aaPredicted RBP18.67■□□□□ 0.58
SEC22C-205ENST00000417572 ANKLE2Q86XL3 938 aa18.66■□□□□ 0.58
SEC22C-205ENST00000417572 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
SEC22C-205ENST00000417572 ZEB1P37275 1124 aaPredicted RBP18.64■□□□□ 0.57
SEC22C-205ENST00000417572 PPLO60437 1756 aa18.64■□□□□ 0.57
SEC22C-205ENST00000417572 NCKAP5LQ9HCH0 1330 aa18.63■□□□□ 0.57
SEC22C-205ENST00000417572 NBPF8Q3BBV2 869 aa18.63■□□□□ 0.57
SEC22C-205ENST00000417572 IFT172Q9UG01 1749 aa18.63■□□□□ 0.57
SEC22C-205ENST00000417572 MYOM2P54296 1465 aa18.62■□□□□ 0.57
SEC22C-205ENST00000417572 SCAF11Q99590 1463 aaKnown RBP18.61■□□□□ 0.57
SEC22C-205ENST00000417572 BCANQ96GW7 911 aa18.6■□□□□ 0.57
SEC22C-205ENST00000417572 PRAG1Q86YV5 1406 aa18.6■□□□□ 0.57
SEC22C-205ENST00000417572 NRXN1Q9ULB1 1477 aa18.6■□□□□ 0.57
SEC22C-205ENST00000417572 PLEKHG1Q9ULL1 1385 aa18.59■□□□□ 0.57
SEC22C-205ENST00000417572 CFAP70Q5T0N1 1121 aa18.58■□□□□ 0.56
SEC22C-205ENST00000417572 PIK3C2GO75747 1445 aa18.57■□□□□ 0.56
SEC22C-205ENST00000417572 C14orf93Q9H972 538 aaKnown RBP18.56■□□□□ 0.56
SEC22C-205ENST00000417572 SLC26A8Q96RN1 970 aa18.55■□□□□ 0.56
SEC22C-205ENST00000417572 NPHP4O75161 1426 aaPredicted RBP18.54■□□□□ 0.56
SEC22C-205ENST00000417572 MED14O60244 1454 aa18.54■□□□□ 0.56
SEC22C-205ENST00000417572 NBPF1Q3BBV0 1214 aa18.54■□□□□ 0.56
SEC22C-205ENST00000417572 ADAMTS13Q76LX8 1427 aa18.52■□□□□ 0.56
SEC22C-205ENST00000417572 TBX22Q9Y458 520 aa18.52■□□□□ 0.56
SEC22C-205ENST00000417572 SETBP1Q9Y6X0 1596 aa18.52■□□□□ 0.55
SEC22C-205ENST00000417572 ALKQ9UM73 1620 aa18.51■□□□□ 0.55
SEC22C-205ENST00000417572 NRXN3Q9Y4C0 1643 aa18.51■□□□□ 0.55
SEC22C-205ENST00000417572 STRCQ7RTU9 1775 aa18.5■□□□□ 0.55
SEC22C-205ENST00000417572 TMEM132EQ6IEE7 984 aa18.5■□□□□ 0.55
SEC22C-205ENST00000417572 POLR1AO95602 1720 aaPredicted RBP18.5■□□□□ 0.55
SEC22C-205ENST00000417572 METP08581 1390 aa18.48■□□□□ 0.55
SEC22C-205ENST00000417572 IQGAP1P46940 1657 aa18.48■□□□□ 0.55
SEC22C-205ENST00000417572 ROCK2O75116 1388 aaKnown RBP18.47■□□□□ 0.55
SEC22C-205ENST00000417572 RALGAPBQ86X10 1494 aa18.47■□□□□ 0.55
SEC22C-205ENST00000417572 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
SEC22C-205ENST00000417572 TRPM1Q7Z4N2 1603 aa18.47■□□□□ 0.55
SEC22C-205ENST00000417572 CARD11Q9BXL7 1154 aa18.45■□□□□ 0.54
SEC22C-205ENST00000417572 KIAA1210Q9ULL0 1709 aa18.45■□□□□ 0.54
SEC22C-205ENST00000417572 GPRASP1Q5JY77 1395 aa18.44■□□□□ 0.54
SEC22C-205ENST00000417572 STK26Q9P289 416 aa18.44■□□□□ 0.54
SEC22C-205ENST00000417572 LAMC1P11047 1609 aa18.43■□□□□ 0.54
SEC22C-205ENST00000417572 ADGRB1O14514 1584 aa18.43■□□□□ 0.54
SEC22C-205ENST00000417572 DIP2AQ14689 1571 aa18.43■□□□□ 0.54
SEC22C-205ENST00000417572 SETD1AO15047 1707 aaKnown RBP18.43■□□□□ 0.54
SEC22C-205ENST00000417572 ASXL1Q8IXJ9 1541 aa18.43■□□□□ 0.54
SEC22C-205ENST00000417572 TRAK1Q9UPV9 953 aa18.41■□□□□ 0.54
SEC22C-205ENST00000417572 AMOTL2Q9Y2J4 779 aa18.41■□□□□ 0.54
SEC22C-205ENST00000417572 PTPRUQ92729 1446 aa18.41■□□□□ 0.54
SEC22C-205ENST00000417572 PIK3R4Q99570 1358 aa18.4■□□□□ 0.54
SEC22C-205ENST00000417572 YTHDC2Q9H6S0 1430 aaKnown RBP18.4■□□□□ 0.54
SEC22C-205ENST00000417572 LRPPRCP42704 1394 aaKnown RBP18.4■□□□□ 0.54
SEC22C-205ENST00000417572 KCNA6P17658 529 aa18.39■□□□□ 0.53
SEC22C-205ENST00000417572 ABCC11Q96J66 1382 aa18.37■□□□□ 0.53
SEC22C-205ENST00000417572 EIF4G2P78344 907 aaKnown RBP eCLIP18.34■□□□□ 0.53
SEC22C-205ENST00000417572 ZNF335Q9H4Z2 1342 aaPredicted RBP18.34■□□□□ 0.53
SEC22C-205ENST00000417572 WAPLQ7Z5K2 1190 aa18.33■□□□□ 0.53
SEC22C-205ENST00000417572 SIRT1Q96EB6 747 aa18.33■□□□□ 0.53
SEC22C-205ENST00000417572 USP47Q96K76 1375 aa18.33■□□□□ 0.53
SEC22C-205ENST00000417572 TECPR2O15040 1411 aa18.33■□□□□ 0.52
SEC22C-205ENST00000417572 ROBO2Q9HCK4 1378 aa18.33■□□□□ 0.52
SEC22C-205ENST00000417572 HSPA5P11021 654 aaKnown RBP18.33■□□□□ 0.52
SEC22C-205ENST00000417572 CHD2O14647 1828 aaKnown RBP18.32■□□□□ 0.52
SEC22C-205ENST00000417572 ST20-MTHFSA0A0A6YYL1 179 aa18.32■□□□□ 0.52
SEC22C-205ENST00000417572 PRAM1Q96QH2 718 aa18.32■□□□□ 0.52
SEC22C-205ENST00000417572 HIRIP3Q9BW71 556 aaPredicted RBP18.31■□□□□ 0.52
SEC22C-205ENST00000417572 POGKQ9P215 609 aa18.31■□□□□ 0.52
SEC22C-205ENST00000417572 SAFB2Q14151 953 aaKnown RBP eCLIP18.3■□□□□ 0.52
SEC22C-205ENST00000417572 DLC1Q96QB1 1528 aa18.3■□□□□ 0.52
SEC22C-205ENST00000417572 XRN1Q8IZH2 1706 aaKnown RBP18.3■□□□□ 0.52
SEC22C-205ENST00000417572 EIF3AQ14152 1382 aaKnown RBP18.3■□□□□ 0.52
SEC22C-205ENST00000417572 PLEKHH1Q9ULM0 1364 aa18.3■□□□□ 0.52
SEC22C-205ENST00000417572 PROSER2Q86WR7 435 aaPredicted RBP18.29■□□□□ 0.52
SEC22C-205ENST00000417572 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
SEC22C-205ENST00000417572 FAM135BQ49AJ0 1406 aa18.29■□□□□ 0.52
SEC22C-205ENST00000417572 NWD1Q149M9 1564 aa18.29■□□□□ 0.52
SEC22C-205ENST00000417572 CENPJQ9HC77 1338 aaPredicted RBP18.29■□□□□ 0.52
SEC22C-205ENST00000417572 PTCH1Q13635 1447 aa18.28■□□□□ 0.52
SEC22C-205ENST00000417572 CPS1P31327 1500 aa18.28■□□□□ 0.52
SEC22C-205ENST00000417572 STRCP1A6NGW2 1772 aa18.27■□□□□ 0.52
SEC22C-205ENST00000417572 KNDC1Q76NI1 1749 aa18.27■□□□□ 0.51
SEC22C-205ENST00000417572 ARHGEF28Q8N1W1 1705 aaKnown RBP18.26■□□□□ 0.51
SEC22C-205ENST00000417572 NKTRP30414 1462 aaKnown RBP18.25■□□□□ 0.51
SEC22C-205ENST00000417572 TESK2Q96S53 571 aa18.24■□□□□ 0.51
SEC22C-205ENST00000417572 MINK1Q8N4C8 1332 aaPredicted RBP18.24■□□□□ 0.51
SEC22C-205ENST00000417572 TMEM94Q12767 1356 aa18.22■□□□□ 0.51
SEC22C-205ENST00000417572 LRRC7Q96NW7 1537 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms