RNA–Protein interactions for RNA: ENST00000417500.5

ARPC4-202, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

TSL 5

Gene ARPC4, Length 957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-202ENST00000417500 HSPA1LP34931 641 aa29.5■■■□□ 2.31
ARPC4-202ENST00000417500 RIMS2Q9UQ26 1411 aa29.5■■■□□ 2.31
ARPC4-202ENST00000417500 E9PCH4 1651 aa29.5■■■□□ 2.31
ARPC4-202ENST00000417500 SENP3Q9H4L4 574 aaPredicted RBP29.49■■■□□ 2.31
ARPC4-202ENST00000417500 PROSER2Q86WR7 435 aaPredicted RBP29.46■■■□□ 2.31
ARPC4-202ENST00000417500 PLEKHG1Q9ULL1 1385 aa29.45■■■□□ 2.31
ARPC4-202ENST00000417500 TMEM131LA2VDJ0 1609 aa29.44■■■□□ 2.3
ARPC4-202ENST00000417500 ZFYVE9O95405 1425 aa29.44■■■□□ 2.3
ARPC4-202ENST00000417500 TRIM52Q96A61 297 aa29.41■■■□□ 2.3
ARPC4-202ENST00000417500 NAIPQ13075 1403 aa29.4■■■□□ 2.3
ARPC4-202ENST00000417500 NUTM2DQ5VT03 806 aaPredicted RBP29.4■■■□□ 2.3
ARPC4-202ENST00000417500 MYO5BQ9ULV0 1848 aa29.4■■■□□ 2.3
ARPC4-202ENST00000417500 TMEM94Q12767 1356 aa29.39■■■□□ 2.3
ARPC4-202ENST00000417500 TBX22Q9Y458 520 aa29.37■■■□□ 2.29
ARPC4-202ENST00000417500 ZNF326Q5BKZ1 582 aaKnown RBP29.36■■■□□ 2.29
ARPC4-202ENST00000417500 NKTRP30414 1462 aaKnown RBP29.34■■■□□ 2.29
ARPC4-202ENST00000417500 ALKQ9UM73 1620 aa29.34■■■□□ 2.29
ARPC4-202ENST00000417500 RBM33Q96EV2 1170 aaKnown RBP29.33■■■□□ 2.29
ARPC4-202ENST00000417500 HFM1A2PYH4 1435 aa29.32■■■□□ 2.28
ARPC4-202ENST00000417500 SPHKAPQ2M3C7 1700 aa29.3■■■□□ 2.28
ARPC4-202ENST00000417500 MSH6P52701 1360 aa29.29■■■□□ 2.28
ARPC4-202ENST00000417500 ILDR2Q71H61 639 aa29.29■■■□□ 2.28
ARPC4-202ENST00000417500 NWD1Q149M9 1564 aa29.28■■■□□ 2.28
ARPC4-202ENST00000417500 XIRP1Q702N8 1843 aaKnown RBP29.27■■■□□ 2.28
ARPC4-202ENST00000417500 C14orf37Q86TY3 774 aa29.27■■■□□ 2.28
ARPC4-202ENST00000417500 SLC4A1APQ9BWU0 796 aaKnown RBP29.27■■■□□ 2.28
ARPC4-202ENST00000417500 DIP2AQ14689 1571 aa29.24■■■□□ 2.27
ARPC4-202ENST00000417500 PIK3R4Q99570 1358 aa29.24■■■□□ 2.27
ARPC4-202ENST00000417500 ADAMTS13Q76LX8 1427 aa29.23■■■□□ 2.27
ARPC4-202ENST00000417500 FAM135BQ49AJ0 1406 aa29.22■■■□□ 2.27
ARPC4-202ENST00000417500 CHD2O14647 1828 aaKnown RBP29.22■■■□□ 2.27
ARPC4-202ENST00000417500 PHF23Q9BUL5 403 aaPredicted RBP29.2■■■□□ 2.26
ARPC4-202ENST00000417500 TRPM2O94759 1503 aa29.2■■■□□ 2.26
ARPC4-202ENST00000417500 AMOTL2Q9Y2J4 779 aa29.18■■■□□ 2.26
ARPC4-202ENST00000417500 NCOA3Q9Y6Q9 1424 aa29.18■■■□□ 2.26
ARPC4-202ENST00000417500 SLAIN2Q9P270 581 aa29.17■■■□□ 2.26
ARPC4-202ENST00000417500 MED1Q15648 1581 aaPredicted RBP29.17■■■□□ 2.26
ARPC4-202ENST00000417500 CLTCL1P53675 1640 aa29.15■■■□□ 2.26
ARPC4-202ENST00000417500 SOCS7O14512 581 aa29.14■■■□□ 2.26
ARPC4-202ENST00000417500 ATF3P18847 181 aa29.13■■■□□ 2.25
ARPC4-202ENST00000417500 C19orf44Q9H6X5 657 aa29.12■■■□□ 2.25
ARPC4-202ENST00000417500 KIF1BO60333 1816 aa29.11■■■□□ 2.25
ARPC4-202ENST00000417500 VGFO15240 615 aaPredicted RBP29.11■■■□□ 2.25
ARPC4-202ENST00000417500 CADPS2Q86UW7 1296 aa29.11■■■□□ 2.25
ARPC4-202ENST00000417500 ACIN1Q9UKV3 1341 aaKnown RBP29.09■■■□□ 2.25
ARPC4-202ENST00000417500 SETBP1Q9Y6X0 1596 aa29.09■■■□□ 2.25
ARPC4-202ENST00000417500 ROBO1Q9Y6N7 1651 aa29.08■■■□□ 2.25
ARPC4-202ENST00000417500 RPGRIP1LQ68CZ1 1315 aa29.07■■■□□ 2.24
ARPC4-202ENST00000417500 NEXMIFQ5QGS0 1516 aa29.05■■■□□ 2.24
ARPC4-202ENST00000417500 PTPRUQ92729 1446 aa29.05■■■□□ 2.24
ARPC4-202ENST00000417500 FOXD1Q16676 465 aa29.05■■■□□ 2.24
ARPC4-202ENST00000417500 MPHOSPH9Q99550 1183 aa29.03■■■□□ 2.24
ARPC4-202ENST00000417500 METP08581 1390 aa29.02■■■□□ 2.24
ARPC4-202ENST00000417500 NRXN3Q9Y4C0 1643 aa29.02■■■□□ 2.24
ARPC4-202ENST00000417500 CCDC144AA2RUR9 1427 aa29.01■■■□□ 2.23
ARPC4-202ENST00000417500 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.97■■■□□ 2.23
ARPC4-202ENST00000417500 SETD5Q9C0A6 1442 aa28.96■■■□□ 2.23
ARPC4-202ENST00000417500 RGL3Q3MIN7 710 aa28.95■■■□□ 2.22
ARPC4-202ENST00000417500 XRN1Q8IZH2 1706 aaKnown RBP28.94■■■□□ 2.22
ARPC4-202ENST00000417500 DCCP43146 1447 aa28.94■■■□□ 2.22
ARPC4-202ENST00000417500 PHLPP1O60346 1717 aa28.93■■■□□ 2.22
ARPC4-202ENST00000417500 JCADQ9P266 1359 aa28.92■■■□□ 2.22
ARPC4-202ENST00000417500 BRINP3Q76B58 766 aa28.87■■■□□ 2.21
ARPC4-202ENST00000417500 ANKRD30BQ9BXX2 1392 aa28.86■■■□□ 2.21
ARPC4-202ENST00000417500 ADGRL3Q9HAR2 1447 aa28.86■■■□□ 2.21
ARPC4-202ENST00000417500 PPLO60437 1756 aa28.84■■■□□ 2.21
ARPC4-202ENST00000417500 RAB3GAP2Q9H2M9 1393 aa28.83■■■□□ 2.21
ARPC4-202ENST00000417500 PTCH1Q13635 1447 aa28.83■■■□□ 2.21
ARPC4-202ENST00000417500 ADGRF5Q8IZF2 1346 aa28.81■■■□□ 2.2
ARPC4-202ENST00000417500 MST1RQ04912 1400 aa28.8■■■□□ 2.2
ARPC4-202ENST00000417500 SPATA31E1Q6ZUB1 1445 aa28.8■■■□□ 2.2
ARPC4-202ENST00000417500 SPATA31A6Q5VVP1 1343 aa28.8■■■□□ 2.2
ARPC4-202ENST00000417500 MEX3CQ5U5Q3 659 aaKnown RBP28.8■■■□□ 2.2
ARPC4-202ENST00000417500 AHDC1Q5TGY3 1603 aaPredicted RBP28.8■■■□□ 2.2
ARPC4-202ENST00000417500 COL16A1Q07092 1604 aaPredicted RBP28.79■■■□□ 2.2
ARPC4-202ENST00000417500 ROBO2Q9HCK4 1378 aa28.78■■■□□ 2.2
ARPC4-202ENST00000417500 RGS17Q9UGC6 210 aaPredicted RBP28.78■■■□□ 2.2
ARPC4-202ENST00000417500 ASXL1Q8IXJ9 1541 aa28.75■■■□□ 2.19
ARPC4-202ENST00000417500 STK26Q9P289 416 aa28.75■■■□□ 2.19
ARPC4-202ENST00000417500 SETD1AO15047 1707 aaKnown RBP28.74■■■□□ 2.19
ARPC4-202ENST00000417500 LRRC59Q96AG4 307 aaKnown RBP28.73■■■□□ 2.19
ARPC4-202ENST00000417500 NALCNQ8IZF0 1738 aa28.72■■■□□ 2.19
ARPC4-202ENST00000417500 PRAG1Q86YV5 1406 aa28.72■■■□□ 2.19
ARPC4-202ENST00000417500 C1orf167Q5SNV9 1468 aa28.69■■■□□ 2.18
ARPC4-202ENST00000417500 NUTM2BA6NNL0 878 aaPredicted RBP28.68■■■□□ 2.18
ARPC4-202ENST00000417500 NUTM2EB1AL46 878 aaPredicted RBP28.68■■■□□ 2.18
ARPC4-202ENST00000417500 TMEM132EQ6IEE7 984 aa28.68■■■□□ 2.18
ARPC4-202ENST00000417500 POTEAQ6S8J7 498 aa28.68■■■□□ 2.18
ARPC4-202ENST00000417500 NUTM2AQ8IVF1 878 aaPredicted RBP28.68■■■□□ 2.18
ARPC4-202ENST00000417500 LRPPRCP42704 1394 aaKnown RBP28.67■■■□□ 2.18
ARPC4-202ENST00000417500 HRCP23327 699 aa28.67■■■□□ 2.18
ARPC4-202ENST00000417500 DDX17Q92841 729 aaKnown RBP28.66■■■□□ 2.18
ARPC4-202ENST00000417500 PIK3C2GO75747 1445 aa28.66■■■□□ 2.18
ARPC4-202ENST00000417500 SHPRHQ149N8 1683 aa28.65■■■□□ 2.18
ARPC4-202ENST00000417500 IFT172Q9UG01 1749 aa28.65■■■□□ 2.18
ARPC4-202ENST00000417500 ABCC11Q96J66 1382 aa28.63■■■□□ 2.17
ARPC4-202ENST00000417500 ZNF772Q68DY9 489 aaPredicted RBP28.63■■■□□ 2.17
ARPC4-202ENST00000417500 WAPLQ7Z5K2 1190 aa28.63■■■□□ 2.17
ARPC4-202ENST00000417500 ORAI2Q96SN7 254 aa28.63■■■□□ 2.17
ARPC4-202ENST00000417500 NHSL1Q5SYE7 1610 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms