RNA–Protein interactions for RNA: ENST00000417226.6

HMCES-203, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

TSL 1 (best) BASIC

Gene HMCES, Length 1,490 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-203ENST00000417226 IQGAP1P46940 1657 aa31.43■■■□□ 2.62
HMCES-203ENST00000417226 ZNF326Q5BKZ1 582 aaKnown RBP31.42■■■□□ 2.62
HMCES-203ENST00000417226 DHX57Q6P158 1386 aaKnown RBP31.42■■■□□ 2.62
HMCES-203ENST00000417226 MED14O60244 1454 aa31.41■■■□□ 2.62
HMCES-203ENST00000417226 NPHP4O75161 1426 aaPredicted RBP31.41■■■□□ 2.62
HMCES-203ENST00000417226 NEXMIFQ5QGS0 1516 aa31.37■■■□□ 2.61
HMCES-203ENST00000417226 SPATA31E1Q6ZUB1 1445 aa31.37■■■□□ 2.61
HMCES-203ENST00000417226 NUTM2DQ5VT03 806 aaPredicted RBP31.36■■■□□ 2.61
HMCES-203ENST00000417226 PPP1R15AO75807 674 aaPredicted RBP31.35■■■□□ 2.61
HMCES-203ENST00000417226 HDGFP51858 240 aaKnown RBP31.34■■■□□ 2.61
HMCES-203ENST00000417226 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.33■■■□□ 2.61
HMCES-203ENST00000417226 PPLO60437 1756 aa31.33■■■□□ 2.61
HMCES-203ENST00000417226 RGL3Q3MIN7 710 aa31.32■■■□□ 2.6
HMCES-203ENST00000417226 SENP3Q9H4L4 574 aaPredicted RBP31.3■■■□□ 2.6
HMCES-203ENST00000417226 IFT172Q9UG01 1749 aa31.29■■■□□ 2.6
HMCES-203ENST00000417226 PLEKHG1Q9ULL1 1385 aa31.28■■■□□ 2.6
HMCES-203ENST00000417226 RPGRIP1LQ68CZ1 1315 aa31.26■■■□□ 2.59
HMCES-203ENST00000417226 BCANQ96GW7 911 aa31.26■■■□□ 2.59
HMCES-203ENST00000417226 NRXN3Q9Y4C0 1643 aa31.2■■■□□ 2.58
HMCES-203ENST00000417226 SLC26A8Q96RN1 970 aa31.2■■■□□ 2.58
HMCES-203ENST00000417226 SETBP1Q9Y6X0 1596 aa31.19■■■□□ 2.58
HMCES-203ENST00000417226 VGFO15240 615 aaPredicted RBP31.19■■■□□ 2.58
HMCES-203ENST00000417226 ZNF335Q9H4Z2 1342 aaPredicted RBP31.18■■■□□ 2.58
HMCES-203ENST00000417226 SIN3AQ96ST3 1273 aa31.17■■■□□ 2.58
HMCES-203ENST00000417226 DIP2AQ14689 1571 aa31.16■■■□□ 2.58
HMCES-203ENST00000417226 ADAMTS13Q76LX8 1427 aa31.15■■■□□ 2.58
HMCES-203ENST00000417226 MYOM2P54296 1465 aa31.12■■■□□ 2.57
HMCES-203ENST00000417226 NEUROD1Q13562 356 aa31.12■■■□□ 2.57
HMCES-203ENST00000417226 ADGRF5Q8IZF2 1346 aa31.12■■■□□ 2.57
HMCES-203ENST00000417226 STRCP1A6NGW2 1772 aa31.11■■■□□ 2.57
HMCES-203ENST00000417226 LTBP4Q8N2S1 1624 aa31.11■■■□□ 2.57
HMCES-203ENST00000417226 SETD1AO15047 1707 aaKnown RBP31.08■■■□□ 2.57
HMCES-203ENST00000417226 DCAF11Q8TEB1 546 aa31.08■■■□□ 2.57
HMCES-203ENST00000417226 TBX22Q9Y458 520 aa31.08■■■□□ 2.57
HMCES-203ENST00000417226 PIK3C2GO75747 1445 aa31.06■■■□□ 2.56
HMCES-203ENST00000417226 CHD2O14647 1828 aaKnown RBP31.06■■■□□ 2.56
HMCES-203ENST00000417226 ALKQ9UM73 1620 aa31.06■■■□□ 2.56
HMCES-203ENST00000417226 NRXN1Q9ULB1 1477 aa31.05■■■□□ 2.56
HMCES-203ENST00000417226 KDM2AQ9Y2K7 1162 aa31.05■■■□□ 2.56
HMCES-203ENST00000417226 NWD1Q149M9 1564 aa31.03■■■□□ 2.56
HMCES-203ENST00000417226 CPS1P31327 1500 aa31.03■■■□□ 2.56
HMCES-203ENST00000417226 CCER1Q8TC90 406 aaPredicted RBP31■■■□□ 2.55
HMCES-203ENST00000417226 METP08581 1390 aa31■■■□□ 2.55
HMCES-203ENST00000417226 PIK3R4Q99570 1358 aa31■■■□□ 2.55
HMCES-203ENST00000417226 LAMC1P11047 1609 aa30.98■■■□□ 2.55
HMCES-203ENST00000417226 KCNA6P17658 529 aa30.98■■■□□ 2.55
HMCES-203ENST00000417226 L3MBTL2Q969R5 705 aa30.96■■■□□ 2.55
HMCES-203ENST00000417226 STAC3Q96MF2 364 aa30.96■■■□□ 2.55
HMCES-203ENST00000417226 PTPRUQ92729 1446 aa30.95■■■□□ 2.55
HMCES-203ENST00000417226 CLSPNQ9HAW4 1339 aa30.95■■■□□ 2.55
HMCES-203ENST00000417226 NKTRP30414 1462 aaKnown RBP30.95■■■□□ 2.54
HMCES-203ENST00000417226 XRN1Q8IZH2 1706 aaKnown RBP30.95■■■□□ 2.54
HMCES-203ENST00000417226 TONSLQ96HA7 1378 aa30.94■■■□□ 2.54
HMCES-203ENST00000417226 CERKQ8TCT0 537 aa30.93■■■□□ 2.54
HMCES-203ENST00000417226 ASXL1Q8IXJ9 1541 aa30.92■■■□□ 2.54
HMCES-203ENST00000417226 LRRC7Q96NW7 1537 aa30.92■■■□□ 2.54
HMCES-203ENST00000417226 AMOTL2Q9Y2J4 779 aa30.9■■■□□ 2.54
HMCES-203ENST00000417226 CFAP70Q5T0N1 1121 aa30.89■■■□□ 2.54
HMCES-203ENST00000417226 C14orf93Q9H972 538 aaKnown RBP30.89■■■□□ 2.54
HMCES-203ENST00000417226 PRAG1Q86YV5 1406 aa30.89■■■□□ 2.54
HMCES-203ENST00000417226 XIRP1Q702N8 1843 aaKnown RBP30.88■■■□□ 2.53
HMCES-203ENST00000417226 TMEM132EQ6IEE7 984 aa30.85■■■□□ 2.53
HMCES-203ENST00000417226 PROSER2Q86WR7 435 aaPredicted RBP30.85■■■□□ 2.53
HMCES-203ENST00000417226 IQSEC2Q5JU85 1478 aa30.84■■■□□ 2.53
HMCES-203ENST00000417226 KIAA1210Q9ULL0 1709 aa30.83■■■□□ 2.53
HMCES-203ENST00000417226 TMEM94Q12767 1356 aa30.83■■■□□ 2.53
HMCES-203ENST00000417226 RBM33Q96EV2 1170 aaKnown RBP30.82■■■□□ 2.53
HMCES-203ENST00000417226 ADGRB1O14514 1584 aa30.81■■■□□ 2.52
HMCES-203ENST00000417226 KNDC1Q76NI1 1749 aa30.81■■■□□ 2.52
HMCES-203ENST00000417226 YTHDC2Q9H6S0 1430 aaKnown RBP30.8■■■□□ 2.52
HMCES-203ENST00000417226 LRPPRCP42704 1394 aaKnown RBP30.8■■■□□ 2.52
HMCES-203ENST00000417226 STK26Q9P289 416 aa30.79■■■□□ 2.52
HMCES-203ENST00000417226 PTCH1Q13635 1447 aa30.79■■■□□ 2.52
HMCES-203ENST00000417226 TRPM1Q7Z4N2 1603 aa30.76■■■□□ 2.52
HMCES-203ENST00000417226 ROBO2Q9HCK4 1378 aa30.76■■■□□ 2.52
HMCES-203ENST00000417226 TECPR2O15040 1411 aa30.74■■■□□ 2.51
HMCES-203ENST00000417226 ABCC11Q96J66 1382 aa30.73■■■□□ 2.51
HMCES-203ENST00000417226 C14orf37Q86TY3 774 aa30.7■■■□□ 2.51
HMCES-203ENST00000417226 NCOA3Q9Y6Q9 1424 aa30.7■■■□□ 2.5
HMCES-203ENST00000417226 NBPF1Q3BBV0 1214 aa30.7■■■□□ 2.5
HMCES-203ENST00000417226 NBPF8Q3BBV2 869 aa30.7■■■□□ 2.5
HMCES-203ENST00000417226 NALCNQ8IZF0 1738 aa30.69■■■□□ 2.5
HMCES-203ENST00000417226 MSH6P52701 1360 aa30.68■■■□□ 2.5
HMCES-203ENST00000417226 TIMELESSQ9UNS1 1208 aa30.67■■■□□ 2.5
HMCES-203ENST00000417226 DLC1Q96QB1 1528 aa30.66■■■□□ 2.5
HMCES-203ENST00000417226 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.65■■■□□ 2.5
HMCES-203ENST00000417226 TRAK1Q9UPV9 953 aa30.65■■■□□ 2.5
HMCES-203ENST00000417226 ARHGEF28Q8N1W1 1705 aaKnown RBP30.65■■■□□ 2.5
HMCES-203ENST00000417226 UBAP1LF5GYI3 381 aa30.64■■■□□ 2.5
HMCES-203ENST00000417226 FAM135BQ49AJ0 1406 aa30.64■■■□□ 2.49
HMCES-203ENST00000417226 ADGRL3Q9HAR2 1447 aa30.64■■■□□ 2.49
HMCES-203ENST00000417226 ROCK2O75116 1388 aaKnown RBP30.63■■■□□ 2.49
HMCES-203ENST00000417226 PLEKHH1Q9ULM0 1364 aa30.63■■■□□ 2.49
HMCES-203ENST00000417226 WAPLQ7Z5K2 1190 aa30.63■■■□□ 2.49
HMCES-203ENST00000417226 RALGAPBQ86X10 1494 aa30.61■■■□□ 2.49
HMCES-203ENST00000417226 PRAM1Q96QH2 718 aa30.59■■■□□ 2.49
HMCES-203ENST00000417226 C19orf44Q9H6X5 657 aa30.59■■■□□ 2.49
HMCES-203ENST00000417226 TOM1O60784 492 aa30.58■■■□□ 2.49
HMCES-203ENST00000417226 SIRT1Q96EB6 747 aa30.58■■■□□ 2.49
HMCES-203ENST00000417226 FBXO41Q8TF61 875 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms