RNA–Protein interactions for RNA: ENST00000416889.6

SPG21-202, Transcript of SPG21, maspardin, humanhuman

TSL 2 BASIC

Gene SPG21, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-202ENST00000416889 NEXMIFQ5QGS0 1516 aa32.44■■■□□ 2.78
SPG21-202ENST00000416889 STAC3Q96MF2 364 aa32.43■■■□□ 2.78
SPG21-202ENST00000416889 THEMISQ8N1K5 641 aaPredicted RBP32.41■■■□□ 2.78
SPG21-202ENST00000416889 MYOM2P54296 1465 aa32.41■■■□□ 2.78
SPG21-202ENST00000416889 RIMS2Q9UQ26 1411 aa32.4■■■□□ 2.78
SPG21-202ENST00000416889 TMEM2Q9UHN6 1383 aa32.38■■■□□ 2.77
SPG21-202ENST00000416889 VGFO15240 615 aaPredicted RBP32.36■■■□□ 2.77
SPG21-202ENST00000416889 HDGFP51858 240 aaKnown RBP32.36■■■□□ 2.77
SPG21-202ENST00000416889 ZFYVE9O95405 1425 aa32.35■■■□□ 2.77
SPG21-202ENST00000416889 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.35■■■□□ 2.77
SPG21-202ENST00000416889 SLIT1O75093 1534 aa32.34■■■□□ 2.77
SPG21-202ENST00000416889 NUTM2DQ5VT03 806 aaPredicted RBP32.34■■■□□ 2.77
SPG21-202ENST00000416889 PRAG1Q86YV5 1406 aa32.34■■■□□ 2.77
SPG21-202ENST00000416889 ARHGAP23Q9P227 1491 aa32.33■■■□□ 2.77
SPG21-202ENST00000416889 ADGRF5Q8IZF2 1346 aa32.32■■■□□ 2.76
SPG21-202ENST00000416889 NBPF8Q3BBV2 869 aa32.31■■■□□ 2.76
SPG21-202ENST00000416889 NRXN1Q9ULB1 1477 aa32.3■■■□□ 2.76
SPG21-202ENST00000416889 EID1Q9Y6B2 187 aa32.29■■■□□ 2.76
SPG21-202ENST00000416889 TXNDC2Q86VQ3 553 aa32.26■■■□□ 2.75
SPG21-202ENST00000416889 PIK3C2GO75747 1445 aa32.25■■■□□ 2.75
SPG21-202ENST00000416889 LMTK3Q96Q04 1460 aa32.23■■■□□ 2.75
SPG21-202ENST00000416889 SCAF11Q99590 1463 aaKnown RBP32.23■■■□□ 2.75
SPG21-202ENST00000416889 TRPM1Q7Z4N2 1603 aa32.22■■■□□ 2.75
SPG21-202ENST00000416889 LTKP29376 864 aa32.22■■■□□ 2.75
SPG21-202ENST00000416889 RALGAPBQ86X10 1494 aa32.2■■■□□ 2.75
SPG21-202ENST00000416889 ANKLE2Q86XL3 938 aa32.2■■■□□ 2.74
SPG21-202ENST00000416889 KIAA1210Q9ULL0 1709 aa32.18■■■□□ 2.74
SPG21-202ENST00000416889 PLEKHG1Q9ULL1 1385 aa32.17■■■□□ 2.74
SPG21-202ENST00000416889 SENP3Q9H4L4 574 aaPredicted RBP32.16■■■□□ 2.74
SPG21-202ENST00000416889 LAMC1P11047 1609 aa32.16■■■□□ 2.74
SPG21-202ENST00000416889 CFAP70Q5T0N1 1121 aa32.15■■■□□ 2.74
SPG21-202ENST00000416889 BCANQ96GW7 911 aa32.15■■■□□ 2.74
SPG21-202ENST00000416889 ROCK2O75116 1388 aaKnown RBP32.14■■■□□ 2.74
SPG21-202ENST00000416889 SETBP1Q9Y6X0 1596 aa32.14■■■□□ 2.74
SPG21-202ENST00000416889 POLR1AO95602 1720 aaPredicted RBP32.14■■■□□ 2.74
SPG21-202ENST00000416889 C14orf93Q9H972 538 aaKnown RBP32.14■■■□□ 2.74
SPG21-202ENST00000416889 HSPA2P54652 639 aa32.13■■■□□ 2.73
SPG21-202ENST00000416889 IQGAP1P46940 1657 aa32.12■■■□□ 2.73
SPG21-202ENST00000416889 NRXN3Q9Y4C0 1643 aa32.11■■■□□ 2.73
SPG21-202ENST00000416889 ALKQ9UM73 1620 aa32.1■■■□□ 2.73
SPG21-202ENST00000416889 NBPF1Q3BBV0 1214 aa32.1■■■□□ 2.73
SPG21-202ENST00000416889 NCKAP5LQ9HCH0 1330 aa32.07■■■□□ 2.72
SPG21-202ENST00000416889 GPRASP1Q5JY77 1395 aa32.06■■■□□ 2.72
SPG21-202ENST00000416889 CARD11Q9BXL7 1154 aa32.06■■■□□ 2.72
SPG21-202ENST00000416889 MED14O60244 1454 aa32.04■■■□□ 2.72
SPG21-202ENST00000416889 NPHP4O75161 1426 aaPredicted RBP32.04■■■□□ 2.72
SPG21-202ENST00000416889 ADAMTS13Q76LX8 1427 aa32.04■■■□□ 2.72
SPG21-202ENST00000416889 SETD1AO15047 1707 aaKnown RBP32.04■■■□□ 2.72
SPG21-202ENST00000416889 DIP2AQ14689 1571 aa32.02■■■□□ 2.72
SPG21-202ENST00000416889 ADGRB1O14514 1584 aa32.01■■■□□ 2.72
SPG21-202ENST00000416889 ASXL1Q8IXJ9 1541 aa32■■■□□ 2.71
SPG21-202ENST00000416889 TMEM132EQ6IEE7 984 aa32■■■□□ 2.71
SPG21-202ENST00000416889 SLC26A8Q96RN1 970 aa32■■■□□ 2.71
SPG21-202ENST00000416889 AEBP2Q6ZN18 517 aaPredicted RBP31.98■■■□□ 2.71
SPG21-202ENST00000416889 TBX22Q9Y458 520 aa31.97■■■□□ 2.71
SPG21-202ENST00000416889 STRCQ7RTU9 1775 aa31.94■■■□□ 2.7
SPG21-202ENST00000416889 METP08581 1390 aa31.94■■■□□ 2.7
SPG21-202ENST00000416889 USP47Q96K76 1375 aa31.94■■■□□ 2.7
SPG21-202ENST00000416889 EIF4G2P78344 907 aaKnown RBP eCLIP31.94■■■□□ 2.74e-8■■■■□ 26.7
SPG21-202ENST00000416889 YTHDC2Q9H6S0 1430 aaKnown RBP31.91■■■□□ 2.7
SPG21-202ENST00000416889 STK26Q9P289 416 aa31.88■■■□□ 2.69
SPG21-202ENST00000416889 LRPPRCP42704 1394 aaKnown RBP31.88■■■□□ 2.69
SPG21-202ENST00000416889 EIF3AQ14152 1382 aaKnown RBP31.88■■■□□ 2.69
SPG21-202ENST00000416889 PIK3R4Q99570 1358 aa31.87■■■□□ 2.69
SPG21-202ENST00000416889 HSPA5P11021 654 aaKnown RBP31.87■■■□□ 2.69
SPG21-202ENST00000416889 TRAK1Q9UPV9 953 aa31.87■■■□□ 2.69
SPG21-202ENST00000416889 KNDC1Q76NI1 1749 aa31.83■■■□□ 2.69
SPG21-202ENST00000416889 ABCC11Q96J66 1382 aa31.82■■■□□ 2.69
SPG21-202ENST00000416889 ARHGEF28Q8N1W1 1705 aaKnown RBP31.82■■■□□ 2.68
SPG21-202ENST00000416889 PTPRUQ92729 1446 aa31.81■■■□□ 2.68
SPG21-202ENST00000416889 HIRIP3Q9BW71 556 aaPredicted RBP31.8■■■□□ 2.68
SPG21-202ENST00000416889 DLC1Q96QB1 1528 aa31.8■■■□□ 2.68
SPG21-202ENST00000416889 ST20-MTHFSA0A0A6YYL1 179 aa31.8■■■□□ 2.68
SPG21-202ENST00000416889 TECPR2O15040 1411 aa31.79■■■□□ 2.68
SPG21-202ENST00000416889 CHD2O14647 1828 aaKnown RBP31.78■■■□□ 2.68
SPG21-202ENST00000416889 AMOTL2Q9Y2J4 779 aa31.78■■■□□ 2.68
SPG21-202ENST00000416889 DMRT2Q9Y5R5 561 aa31.78■■■□□ 2.68
SPG21-202ENST00000416889 CPS1P31327 1500 aa31.77■■■□□ 2.68
SPG21-202ENST00000416889 XRN1Q8IZH2 1706 aaKnown RBP31.77■■■□□ 2.68
SPG21-202ENST00000416889 CENPJQ9HC77 1338 aaPredicted RBP31.75■■■□□ 2.67
SPG21-202ENST00000416889 SIRT1Q96EB6 747 aa31.72■■■□□ 2.67
SPG21-202ENST00000416889 PRAM1Q96QH2 718 aa31.72■■■□□ 2.67
SPG21-202ENST00000416889 POGKQ9P215 609 aa31.72■■■□□ 2.67
SPG21-202ENST00000416889 NWD1Q149M9 1564 aa31.72■■■□□ 2.67
SPG21-202ENST00000416889 KCNA6P17658 529 aa31.71■■■□□ 2.67
SPG21-202ENST00000416889 PTCH1Q13635 1447 aa31.71■■■□□ 2.67
SPG21-202ENST00000416889 FAM135BQ49AJ0 1406 aa31.71■■■□□ 2.67
SPG21-202ENST00000416889 QRICH2Q9H0J4 1663 aa31.71■■■□□ 2.67
SPG21-202ENST00000416889 ROBO2Q9HCK4 1378 aa31.7■■■□□ 2.67
SPG21-202ENST00000416889 ZNF316A6NFI3 1004 aaPredicted RBP31.7■■■□□ 2.66
SPG21-202ENST00000416889 WAPLQ7Z5K2 1190 aa31.67■■■□□ 2.66
SPG21-202ENST00000416889 SAFB2Q14151 953 aaKnown RBP eCLIP31.66■■■□□ 2.66
SPG21-202ENST00000416889 TESK2Q96S53 571 aa31.66■■■□□ 2.66
SPG21-202ENST00000416889 PLEKHH1Q9ULM0 1364 aa31.65■■■□□ 2.66
SPG21-202ENST00000416889 SBNO2Q9Y2G9 1366 aa31.65■■■□□ 2.66
SPG21-202ENST00000416889 SLC24A1O60721 1099 aa31.63■■■□□ 2.65
SPG21-202ENST00000416889 NKTRP30414 1462 aaKnown RBP31.63■■■□□ 2.65
SPG21-202ENST00000416889 TMF1P82094 1093 aa31.6■■■□□ 2.65
SPG21-202ENST00000416889 STRCP1A6NGW2 1772 aa31.6■■■□□ 2.65
SPG21-202ENST00000416889 MINK1Q8N4C8 1332 aaPredicted RBP31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms