RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 NAIPQ13075 1403 aa27.06■■□□□ 1.92
CPNE1-210ENST00000416778 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.05■■□□□ 1.92
CPNE1-210ENST00000416778 RIMS2Q9UQ26 1411 aa27.05■■□□□ 1.92
CPNE1-210ENST00000416778 SENP3Q9H4L4 574 aaPredicted RBP27.04■■□□□ 1.92
CPNE1-210ENST00000416778 TMEM131LA2VDJ0 1609 aa27.03■■□□□ 1.92
CPNE1-210ENST00000416778 DISP3Q9P2K9 1392 aa27.03■■□□□ 1.92
CPNE1-210ENST00000416778 ALKQ9UM73 1620 aa27.03■■□□□ 1.92
CPNE1-210ENST00000416778 PLEKHG1Q9ULL1 1385 aa27.02■■□□□ 1.92
CPNE1-210ENST00000416778 PPP1R15AO75807 674 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-210ENST00000416778 NUTM2DQ5VT03 806 aaPredicted RBP27.01■■□□□ 1.91
CPNE1-210ENST00000416778 TBX22Q9Y458 520 aa27.01■■□□□ 1.91
CPNE1-210ENST00000416778 PROSER2Q86WR7 435 aaPredicted RBP27■■□□□ 1.91
CPNE1-210ENST00000416778 RBM33Q96EV2 1170 aaKnown RBP26.97■■□□□ 1.91
CPNE1-210ENST00000416778 TMEM94Q12767 1356 aa26.97■■□□□ 1.91
CPNE1-210ENST00000416778 TRIM52Q96A61 297 aa26.95■■□□□ 1.9
CPNE1-210ENST00000416778 HFM1A2PYH4 1435 aa26.94■■□□□ 1.9
CPNE1-210ENST00000416778 MYO5BQ9ULV0 1848 aa26.94■■□□□ 1.9
CPNE1-210ENST00000416778 ILDR2Q71H61 639 aa26.93■■□□□ 1.9
CPNE1-210ENST00000416778 ADAMTS13Q76LX8 1427 aa26.89■■□□□ 1.89
CPNE1-210ENST00000416778 XIRP1Q702N8 1843 aaKnown RBP26.88■■□□□ 1.89
CPNE1-210ENST00000416778 ZNF326Q5BKZ1 582 aaKnown RBP26.87■■□□□ 1.89
CPNE1-210ENST00000416778 SLC4A1APQ9BWU0 796 aaKnown RBP26.87■■□□□ 1.89
CPNE1-210ENST00000416778 NKTRP30414 1462 aaKnown RBP26.83■■□□□ 1.89
CPNE1-210ENST00000416778 FAM135BQ49AJ0 1406 aa26.82■■□□□ 1.88
CPNE1-210ENST00000416778 NWD1Q149M9 1564 aa26.82■■□□□ 1.88
CPNE1-210ENST00000416778 PIK3R4Q99570 1358 aa26.82■■□□□ 1.88
CPNE1-210ENST00000416778 AMOTL2Q9Y2J4 779 aa26.81■■□□□ 1.88
CPNE1-210ENST00000416778 SPHKAPQ2M3C7 1700 aa26.8■■□□□ 1.88
CPNE1-210ENST00000416778 SLAIN2Q9P270 581 aa26.8■■□□□ 1.88
CPNE1-210ENST00000416778 CHD2O14647 1828 aaKnown RBP26.8■■□□□ 1.88
CPNE1-210ENST00000416778 MSH6P52701 1360 aa26.77■■□□□ 1.88
CPNE1-210ENST00000416778 TRPM2O94759 1503 aa26.76■■□□□ 1.87
CPNE1-210ENST00000416778 NCOA3Q9Y6Q9 1424 aa26.76■■□□□ 1.87
CPNE1-210ENST00000416778 FOXD1Q16676 465 aa26.76■■□□□ 1.87
CPNE1-210ENST00000416778 PTPRUQ92729 1446 aa26.75■■□□□ 1.87
CPNE1-210ENST00000416778 MPHOSPH9Q99550 1183 aa26.74■■□□□ 1.87
CPNE1-210ENST00000416778 C19orf44Q9H6X5 657 aa26.74■■□□□ 1.87
CPNE1-210ENST00000416778 CLTCL1P53675 1640 aa26.74■■□□□ 1.87
CPNE1-210ENST00000416778 DIP2AQ14689 1571 aa26.72■■□□□ 1.87
CPNE1-210ENST00000416778 VGFO15240 615 aaPredicted RBP26.72■■□□□ 1.87
CPNE1-210ENST00000416778 METP08581 1390 aa26.71■■□□□ 1.87
CPNE1-210ENST00000416778 RPGRIP1LQ68CZ1 1315 aa26.7■■□□□ 1.87
CPNE1-210ENST00000416778 C14orf37Q86TY3 774 aa26.7■■□□□ 1.86
CPNE1-210ENST00000416778 SOCS7O14512 581 aa26.68■■□□□ 1.86
CPNE1-210ENST00000416778 SETBP1Q9Y6X0 1596 aa26.67■■□□□ 1.86
CPNE1-210ENST00000416778 NEXMIFQ5QGS0 1516 aa26.67■■□□□ 1.86
CPNE1-210ENST00000416778 CADPS2Q86UW7 1296 aa26.66■■□□□ 1.86
CPNE1-210ENST00000416778 NRXN3Q9Y4C0 1643 aa26.65■■□□□ 1.86
CPNE1-210ENST00000416778 ATF3P18847 181 aa26.65■■□□□ 1.86
CPNE1-210ENST00000416778 MED1Q15648 1581 aaPredicted RBP26.65■■□□□ 1.86
CPNE1-210ENST00000416778 ACIN1Q9UKV3 1341 aaKnown RBP26.65■■□□□ 1.86
CPNE1-210ENST00000416778 SETD5Q9C0A6 1442 aa26.63■■□□□ 1.85
CPNE1-210ENST00000416778 KIF1BO60333 1816 aa26.61■■□□□ 1.85
CPNE1-210ENST00000416778 ROBO1Q9Y6N7 1651 aa26.6■■□□□ 1.85
CPNE1-210ENST00000416778 RGL3Q3MIN7 710 aa26.58■■□□□ 1.85
CPNE1-210ENST00000416778 PHF23Q9BUL5 403 aaPredicted RBP26.57■■□□□ 1.84
CPNE1-210ENST00000416778 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.55■■□□□ 1.84
CPNE1-210ENST00000416778 CCDC144AA2RUR9 1427 aa26.55■■□□□ 1.84
CPNE1-210ENST00000416778 RGS17Q9UGC6 210 aaPredicted RBP26.54■■□□□ 1.84
CPNE1-210ENST00000416778 ADGRF5Q8IZF2 1346 aa26.53■■□□□ 1.84
CPNE1-210ENST00000416778 SPATA31E1Q6ZUB1 1445 aa26.53■■□□□ 1.84
CPNE1-210ENST00000416778 XRN1Q8IZH2 1706 aaKnown RBP26.53■■□□□ 1.84
CPNE1-210ENST00000416778 BRINP3Q76B58 766 aa26.52■■□□□ 1.84
CPNE1-210ENST00000416778 RAB3GAP2Q9H2M9 1393 aa26.51■■□□□ 1.83
CPNE1-210ENST00000416778 DCCP43146 1447 aa26.49■■□□□ 1.83
CPNE1-210ENST00000416778 ROBO2Q9HCK4 1378 aa26.47■■□□□ 1.83
CPNE1-210ENST00000416778 ANKRD30BQ9BXX2 1392 aa26.46■■□□□ 1.83
CPNE1-210ENST00000416778 JCADQ9P266 1359 aa26.46■■□□□ 1.83
CPNE1-210ENST00000416778 HRCP23327 699 aa26.46■■□□□ 1.83
CPNE1-210ENST00000416778 MST1RQ04912 1400 aa26.44■■□□□ 1.82
CPNE1-210ENST00000416778 ADGRL3Q9HAR2 1447 aa26.44■■□□□ 1.82
CPNE1-210ENST00000416778 PPLO60437 1756 aa26.43■■□□□ 1.82
CPNE1-210ENST00000416778 PHLPP1O60346 1717 aa26.42■■□□□ 1.82
CPNE1-210ENST00000416778 PTCH1Q13635 1447 aa26.41■■□□□ 1.82
CPNE1-210ENST00000416778 SETD1AO15047 1707 aaKnown RBP26.4■■□□□ 1.82
CPNE1-210ENST00000416778 PRAG1Q86YV5 1406 aa26.39■■□□□ 1.82
CPNE1-210ENST00000416778 TMEM132EQ6IEE7 984 aa26.39■■□□□ 1.82
CPNE1-210ENST00000416778 STK26Q9P289 416 aa26.38■■□□□ 1.81
CPNE1-210ENST00000416778 COL16A1Q07092 1604 aaPredicted RBP26.38■■□□□ 1.81
CPNE1-210ENST00000416778 AHDC1Q5TGY3 1603 aaPredicted RBP26.37■■□□□ 1.81
CPNE1-210ENST00000416778 POTEAQ6S8J7 498 aa26.37■■□□□ 1.81
CPNE1-210ENST00000416778 C14orf93Q9H972 538 aaKnown RBP26.37■■□□□ 1.81
CPNE1-210ENST00000416778 SPATA31A6Q5VVP1 1343 aa26.37■■□□□ 1.81
CPNE1-210ENST00000416778 DDX17Q92841 729 aaKnown RBP26.36■■□□□ 1.81
CPNE1-210ENST00000416778 WAPLQ7Z5K2 1190 aa26.35■■□□□ 1.81
CPNE1-210ENST00000416778 ABCC11Q96J66 1382 aa26.34■■□□□ 1.81
CPNE1-210ENST00000416778 LRRC59Q96AG4 307 aaKnown RBP26.34■■□□□ 1.81
CPNE1-210ENST00000416778 ORAI2Q96SN7 254 aa26.34■■□□□ 1.81
CPNE1-210ENST00000416778 LRPPRCP42704 1394 aaKnown RBP26.33■■□□□ 1.81
CPNE1-210ENST00000416778 C1orf167Q5SNV9 1468 aa26.33■■□□□ 1.81
CPNE1-210ENST00000416778 ASXL1Q8IXJ9 1541 aa26.33■■□□□ 1.81
CPNE1-210ENST00000416778 PIK3C2GO75747 1445 aa26.32■■□□□ 1.8
CPNE1-210ENST00000416778 CFAP70Q5T0N1 1121 aa26.31■■□□□ 1.8
CPNE1-210ENST00000416778 SIRT1Q96EB6 747 aa26.31■■□□□ 1.8
CPNE1-210ENST00000416778 NALCNQ8IZF0 1738 aa26.3■■□□□ 1.8
CPNE1-210ENST00000416778 TECPR2O15040 1411 aa26.28■■□□□ 1.8
CPNE1-210ENST00000416778 IFT172Q9UG01 1749 aa26.27■■□□□ 1.8
CPNE1-210ENST00000416778 NRXN1Q9ULB1 1477 aa26.25■■□□□ 1.79
CPNE1-210ENST00000416778 NUTM2BA6NNL0 878 aaPredicted RBP26.25■■□□□ 1.79
CPNE1-210ENST00000416778 NUTM2EB1AL46 878 aaPredicted RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms