RNA–Protein interactions for RNA: ENST00000416516.2

DCLK3-201, Transcript of doublecortin like kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DCLK3, Length 5,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK3-201ENST00000416516 TRDNQ13061 729 aa13.33□□□□□ -0.28
DCLK3-201ENST00000416516 E9PSI1 815 aa13.33□□□□□ -0.28
DCLK3-201ENST00000416516 ARID3AQ99856 593 aa13.33□□□□□ -0.28
DCLK3-201ENST00000416516 API5Q9BZZ5 524 aaKnown RBP13.33□□□□□ -0.28
DCLK3-201ENST00000416516 HSP90AA2PQ14568 343 aaPredicted RBP13.32□□□□□ -0.28
DCLK3-201ENST00000416516 ZKSCAN2Q63HK3 967 aa13.32□□□□□ -0.28
DCLK3-201ENST00000416516 PES1O00541 588 aaKnown RBP13.32□□□□□ -0.28
DCLK3-201ENST00000416516 LTV1Q96GA3 475 aaPredicted RBP13.32□□□□□ -0.28
DCLK3-201ENST00000416516 CRBNQ96SW2 442 aa13.32□□□□□ -0.28
DCLK3-201ENST00000416516 CCDC144AA2RUR9 1427 aa13.31□□□□□ -0.28
DCLK3-201ENST00000416516 ST20-MTHFSA0A0A6YYL1 179 aa13.31□□□□□ -0.28
DCLK3-201ENST00000416516 CDR1P51861 262 aa13.31□□□□□ -0.28
DCLK3-201ENST00000416516 HMGB2P26583 209 aaKnown RBP13.31□□□□□ -0.28
DCLK3-201ENST00000416516 AAMPQ13685 434 aa13.31□□□□□ -0.28
DCLK3-201ENST00000416516 CLUAP1Q96AJ1 413 aa13.3□□□□□ -0.28
DCLK3-201ENST00000416516 CCDC146Q8IYE0 955 aa13.3□□□□□ -0.28
DCLK3-201ENST00000416516 CCDC43Q96MW1 224 aaKnown RBP13.3□□□□□ -0.28
DCLK3-201ENST00000416516 C9orf78Q9NZ63 289 aaPredicted RBP13.3□□□□□ -0.28
DCLK3-201ENST00000416516 CPLX1O14810 134 aa13.3□□□□□ -0.28
DCLK3-201ENST00000416516 ERICH2A1L162 156 aa13.29□□□□□ -0.28
DCLK3-201ENST00000416516 VPS37DQ86XT2 251 aa13.29□□□□□ -0.28
DCLK3-201ENST00000416516 CWC22Q9HCG8 908 aaKnown RBP13.29□□□□□ -0.28
DCLK3-201ENST00000416516 MSH5O43196 834 aa13.29□□□□□ -0.28
DCLK3-201ENST00000416516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.28
DCLK3-201ENST00000416516 IFIT2P09913 472 aaKnown RBP13.27□□□□□ -0.28
DCLK3-201ENST00000416516 HNRNPMP52272 730 aaKnown RBP eCLIP13.27□□□□□ -0.28
DCLK3-201ENST00000416516 DDX19BQ9UMR2 479 aa13.27□□□□□ -0.28
DCLK3-201ENST00000416516 SAFBQ15424 915 aaKnown RBP eCLIP13.27□□□□□ -0.29
DCLK3-201ENST00000416516 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.29
DCLK3-201ENST00000416516 R3HCC1Q9Y3T6 440 aaKnown RBP13.27□□□□□ -0.29
DCLK3-201ENST00000416516 RILPL2Q969X0 211 aa13.27□□□□□ -0.29
DCLK3-201ENST00000416516 RDXP35241 583 aaKnown RBP13.26□□□□□ -0.29
DCLK3-201ENST00000416516 JPH4Q96JJ6 628 aa13.26□□□□□ -0.29
DCLK3-201ENST00000416516 TRAK1Q9UPV9 953 aa13.26□□□□□ -0.29
DCLK3-201ENST00000416516 USP47Q96K76 1375 aa13.26□□□□□ -0.29
DCLK3-201ENST00000416516 G3BP1Q13283 466 aaKnown RBP eCLIP13.26□□□□□ -0.29
DCLK3-201ENST00000416516 TDRD9Q8NDG6 1382 aaKnown RBP13.26□□□□□ -0.29
DCLK3-201ENST00000416516 PDE4CQ08493 712 aa13.26□□□□□ -0.29
DCLK3-201ENST00000416516 CCDC7Q96M83 1385 aa13.25□□□□□ -0.29
DCLK3-201ENST00000416516 ERC2O15083 957 aa13.25□□□□□ -0.29
DCLK3-201ENST00000416516 MEX3CQ5U5Q3 659 aaKnown RBP13.25□□□□□ -0.29
DCLK3-201ENST00000416516 VSIG10Q8N0Z9 540 aa13.25□□□□□ -0.29
DCLK3-201ENST00000416516 NFKBIBQ15653 356 aa13.25□□□□□ -0.29
DCLK3-201ENST00000416516 KIF21BO75037 1637 aa13.24□□□□□ -0.29
DCLK3-201ENST00000416516 CNTLNQ9NXG0 1405 aa13.24□□□□□ -0.29
DCLK3-201ENST00000416516 RBM33Q96EV2 1170 aaKnown RBP13.24□□□□□ -0.29
DCLK3-201ENST00000416516 DHX16O60231 1041 aaKnown RBP13.24□□□□□ -0.29
DCLK3-201ENST00000416516 PANK3Q9H999 370 aa13.24□□□□□ -0.29
DCLK3-201ENST00000416516 ANKRD45Q5TZF3 282 aa13.24□□□□□ -0.29
DCLK3-201ENST00000416516 PCMTD1Q96MG8 357 aaPredicted RBP13.24□□□□□ -0.29
DCLK3-201ENST00000416516 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
DCLK3-201ENST00000416516 XBP1P17861 261 aa13.23□□□□□ -0.29
DCLK3-201ENST00000416516 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
DCLK3-201ENST00000416516 DIAPH1O60610 1272 aaKnown RBP13.23□□□□□ -0.29
DCLK3-201ENST00000416516 BRMS1Q9HCU9 246 aa13.23□□□□□ -0.29
DCLK3-201ENST00000416516 AMER1Q5JTC6 1135 aaPredicted RBP13.23□□□□□ -0.29
DCLK3-201ENST00000416516 PSME1Q06323 249 aa13.23□□□□□ -0.29
DCLK3-201ENST00000416516 DDX49Q9Y6V7 483 aaKnown RBP13.23□□□□□ -0.29
DCLK3-201ENST00000416516 APPP05067 770 aa13.22□□□□□ -0.29
DCLK3-201ENST00000416516 ACBD3Q9H3P7 528 aa13.22□□□□□ -0.29
DCLK3-201ENST00000416516 RAPGEF4Q8WZA2 1011 aa13.22□□□□□ -0.29
DCLK3-201ENST00000416516 MCTP1Q6DN14 999 aa13.22□□□□□ -0.29
DCLK3-201ENST00000416516 NOL8Q76FK4 1167 aaKnown RBP13.22□□□□□ -0.29
DCLK3-201ENST00000416516 GNAI1P63096 354 aa13.2□□□□□ -0.3
DCLK3-201ENST00000416516 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
DCLK3-201ENST00000416516 CCDC173Q0VFZ6 552 aa13.2□□□□□ -0.3
DCLK3-201ENST00000416516 PTPRGP23470 1445 aa13.2□□□□□ -0.3
DCLK3-201ENST00000416516 MIA2Q96PC5 1412 aa13.2□□□□□ -0.3
DCLK3-201ENST00000416516 ODF2Q5BJF6 829 aa13.2□□□□□ -0.3
DCLK3-201ENST00000416516 ATF3P18847 181 aa13.2□□□□□ -0.3
DCLK3-201ENST00000416516 COG6Q9Y2V7 657 aa13.2□□□□□ -0.3
DCLK3-201ENST00000416516 NFXL1Q6ZNB6 911 aa13.19□□□□□ -0.3
DCLK3-201ENST00000416516 IL27Q8NEV9 243 aa13.19□□□□□ -0.3
DCLK3-201ENST00000416516 RALYLQ86SE5 291 aaKnown RBP13.19□□□□□ -0.3
DCLK3-201ENST00000416516 CT47A1Q5JQC4 288 aaPredicted RBP13.19□□□□□ -0.3
DCLK3-201ENST00000416516 TEX35Q5T0J7 233 aa13.19□□□□□ -0.3
DCLK3-201ENST00000416516 WWC2Q6AWC2 1192 aa13.19□□□□□ -0.3
DCLK3-201ENST00000416516 NUCB2P80303 420 aa13.18□□□□□ -0.3
DCLK3-201ENST00000416516 MYO6Q9UM54 1294 aa13.18□□□□□ -0.3
DCLK3-201ENST00000416516 RAD21O60216 631 aa13.18□□□□□ -0.3
DCLK3-201ENST00000416516 ANO2Q9NQ90 1003 aa13.18□□□□□ -0.3
DCLK3-201ENST00000416516 SMARCA4P51532 1647 aa13.18□□□□□ -0.3
DCLK3-201ENST00000416516 RRP12Q5JTH9 1297 aaKnown RBP13.18□□□□□ -0.3
DCLK3-201ENST00000416516 CCDC73Q6ZRK6 1079 aa13.18□□□□□ -0.3
DCLK3-201ENST00000416516 RRBP1Q9P2E9 1410 aaKnown RBP13.18□□□□□ -0.3
DCLK3-201ENST00000416516 INTS3Q68E01 1043 aaKnown RBP13.17□□□□□ -0.3
DCLK3-201ENST00000416516 CCAR2Q8N163 923 aaKnown RBP13.17□□□□□ -0.3
DCLK3-201ENST00000416516 BCL2L13Q9BXK5 485 aa13.17□□□□□ -0.3
DCLK3-201ENST00000416516 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
DCLK3-201ENST00000416516 AK7Q96M32 723 aa13.17□□□□□ -0.3
DCLK3-201ENST00000416516 SART3Q15020 963 aaKnown RBP13.17□□□□□ -0.3
DCLK3-201ENST00000416516 NUTM2FA1L443 756 aa13.16□□□□□ -0.3
DCLK3-201ENST00000416516 RRP7AQ9Y3A4 280 aaKnown RBP13.16□□□□□ -0.3
DCLK3-201ENST00000416516 BRPF3Q9ULD4 1205 aa13.16□□□□□ -0.3
DCLK3-201ENST00000416516 EIF2S2P20042 333 aaKnown RBP13.16□□□□□ -0.3
DCLK3-201ENST00000416516 BICD2Q8TD16 824 aa13.16□□□□□ -0.3
DCLK3-201ENST00000416516 SLC3A2P08195 630 aaKnown RBP13.16□□□□□ -0.3
DCLK3-201ENST00000416516 DHX8Q14562 1220 aaKnown RBP13.16□□□□□ -0.3
DCLK3-201ENST00000416516 NAT10Q9H0A0 1025 aaKnown RBP13.16□□□□□ -0.3
DCLK3-201ENST00000416516 APAF1O14727 1248 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms