RNA–Protein interactions for RNA: ENST00000416098.1

NXF4-202, Transcript of nuclear RNA export factor 4 pseudogene, humanhuman

BASIC

Gene NXF4, Length 1,465 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF4-202ENST00000416098 ONECUT3O60422 494 aaPredicted RBP9.4□□□□□ -0.9
NXF4-202ENST00000416098 MYSM1Q5VVJ2 828 aa9.4□□□□□ -0.9
NXF4-202ENST00000416098 PNMA3Q9UL41 463 aa9.4□□□□□ -0.9
NXF4-202ENST00000416098 FLIIQ13045 1269 aa9.4□□□□□ -0.91
NXF4-202ENST00000416098 PROX2Q3B8N5 592 aa9.4□□□□□ -0.91
NXF4-202ENST00000416098 PACS2Q86VP3 889 aa9.4□□□□□ -0.91
NXF4-202ENST00000416098 KCNK17Q96T54 332 aa9.4□□□□□ -0.91
NXF4-202ENST00000416098 TBC1D2Q9BYX2 928 aa9.4□□□□□ -0.91
NXF4-202ENST00000416098 TOP2AP11388 1531 aaKnown RBP9.39□□□□□ -0.91
NXF4-202ENST00000416098 NBPF26B4DH59 902 aa9.38□□□□□ -0.91
NXF4-202ENST00000416098 SMAPO00193 183 aa9.38□□□□□ -0.91
NXF4-202ENST00000416098 ATP1B4Q9UN42 357 aaPredicted RBP9.38□□□□□ -0.91
NXF4-202ENST00000416098 LAMC3Q9Y6N6 1575 aa9.38□□□□□ -0.91
NXF4-202ENST00000416098 DNAJB2P25686 324 aa9.37□□□□□ -0.91
NXF4-202ENST00000416098 CD46P15529 392 aa9.36□□□□□ -0.91
NXF4-202ENST00000416098 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.36□□□□□ -0.91
NXF4-202ENST00000416098 DDX11L8A8MPP1 907 aa9.35□□□□□ -0.91
NXF4-202ENST00000416098 RANGAP1P46060 587 aaPredicted RBP9.35□□□□□ -0.91
NXF4-202ENST00000416098 PSEN2P49810 448 aa9.35□□□□□ -0.91
NXF4-202ENST00000416098 SPIRE2Q8WWL2 714 aa9.35□□□□□ -0.91
NXF4-202ENST00000416098 ZBED2Q9BTP6 218 aa9.35□□□□□ -0.91
NXF4-202ENST00000416098 TMEM134Q9H6X4 195 aa9.35□□□□□ -0.91
NXF4-202ENST00000416098 KIAA1468Q9P260 1216 aa9.35□□□□□ -0.91
NXF4-202ENST00000416098 CLK2P49760 499 aaKnown RBP9.34□□□□□ -0.91
NXF4-202ENST00000416098 DIXDC1Q155Q3 683 aa9.34□□□□□ -0.91
NXF4-202ENST00000416098 FBXO31Q5XUX0 539 aaPredicted RBP9.34□□□□□ -0.91
NXF4-202ENST00000416098 POTEEQ6S8J3 1075 aa9.33□□□□□ -0.92
NXF4-202ENST00000416098 SULF1Q8IWU6 871 aa9.33□□□□□ -0.92
NXF4-202ENST00000416098 LIMD1Q9UGP4 676 aa9.33□□□□□ -0.92
NXF4-202ENST00000416098 NESP48681 1621 aa9.33□□□□□ -0.92
NXF4-202ENST00000416098 RIC3Q7Z5B4 369 aa9.32□□□□□ -0.92
NXF4-202ENST00000416098 ERCC6Q03468 1493 aa9.32□□□□□ -0.92
NXF4-202ENST00000416098 MCM6Q14566 821 aa9.31□□□□□ -0.92
NXF4-202ENST00000416098 VARS2Q5ST30 1063 aaKnown RBP9.31□□□□□ -0.92
NXF4-202ENST00000416098 KCNH8Q96L42 1107 aa9.31□□□□□ -0.92
NXF4-202ENST00000416098 ERBB3P21860 1342 aa9.31□□□□□ -0.92
NXF4-202ENST00000416098 CADPSQ9ULU8 1353 aa9.31□□□□□ -0.92
NXF4-202ENST00000416098 ARHGAP33O14559 1287 aa9.3□□□□□ -0.92
NXF4-202ENST00000416098 LHX8Q68G74 356 aa9.3□□□□□ -0.92
NXF4-202ENST00000416098 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
NXF4-202ENST00000416098 CLUAP1Q96AJ1 413 aa9.3□□□□□ -0.92
NXF4-202ENST00000416098 AXIN2Q9Y2T1 843 aa9.3□□□□□ -0.92
NXF4-202ENST00000416098 DMRTA1Q5VZB9 504 aa9.29□□□□□ -0.92
NXF4-202ENST00000416098 PDS5BQ9NTI5 1447 aa9.29□□□□□ -0.92
NXF4-202ENST00000416098 MOXD2PA6NHM9 499 aa9.28□□□□□ -0.92
NXF4-202ENST00000416098 SPTLC1O15269 473 aa9.28□□□□□ -0.92
NXF4-202ENST00000416098 ST18O60284 1047 aa9.28□□□□□ -0.92
NXF4-202ENST00000416098 KIF21AQ7Z4S6 1674 aa9.28□□□□□ -0.92
NXF4-202ENST00000416098 PRDM2Q13029 1718 aa9.28□□□□□ -0.92
NXF4-202ENST00000416098 NDUFV2P19404 249 aa9.28□□□□□ -0.92
NXF4-202ENST00000416098 RFC5P40937 340 aa9.28□□□□□ -0.92
NXF4-202ENST00000416098 RSBN1LQ6PCB5 846 aaPredicted RBP9.28□□□□□ -0.92
NXF4-202ENST00000416098 RDH13Q8NBN7 331 aa9.28□□□□□ -0.92
NXF4-202ENST00000416098 RABGEF1Q9UJ41 708 aa9.28□□□□□ -0.92
NXF4-202ENST00000416098 A6NJR5 290 aa9.27□□□□□ -0.93
NXF4-202ENST00000416098 UBTFP17480 764 aaKnown RBP9.27□□□□□ -0.93
NXF4-202ENST00000416098 PPP2R2DQ66LE6 453 aa9.27□□□□□ -0.93
NXF4-202ENST00000416098 SLC4A5Q9BY07 1137 aa9.27□□□□□ -0.93
NXF4-202ENST00000416098 C1orf115Q9H7X2 142 aa9.27□□□□□ -0.93
NXF4-202ENST00000416098 SEPT9Q9UHD8 586 aaPredicted RBP9.27□□□□□ -0.93
NXF4-202ENST00000416098 CFTRP13569 1480 aa9.26□□□□□ -0.93
NXF4-202ENST00000416098 TUSC1Q2TAM9 212 aa9.26□□□□□ -0.93
NXF4-202ENST00000416098 SWT1Q5T5J6 900 aaKnown RBP9.26□□□□□ -0.93
NXF4-202ENST00000416098 MARVELD3Q96A59 401 aa9.26□□□□□ -0.93
NXF4-202ENST00000416098 CUX2O14529 1486 aa9.25□□□□□ -0.93
NXF4-202ENST00000416098 SLC10A3P09131 477 aa9.25□□□□□ -0.93
NXF4-202ENST00000416098 CSPP1Q1MSJ5 1256 aa9.25□□□□□ -0.93
NXF4-202ENST00000416098 SNRKQ9NRH2 765 aa9.25□□□□□ -0.93
NXF4-202ENST00000416098 PCDHB15Q9Y5E8 787 aa9.25□□□□□ -0.93
NXF4-202ENST00000416098 CCDC88BA6NC98 1476 aa9.24□□□□□ -0.93
NXF4-202ENST00000416098 ARID3CA6NKF2 412 aa9.24□□□□□ -0.93
NXF4-202ENST00000416098 KDM4AO75164 1064 aa9.24□□□□□ -0.93
NXF4-202ENST00000416098 GCGRP47871 477 aa9.24□□□□□ -0.93
NXF4-202ENST00000416098 EMP3P54852 163 aa9.24□□□□□ -0.93
NXF4-202ENST00000416098 QPCTQ16769 361 aa9.24□□□□□ -0.93
NXF4-202ENST00000416098 THOC2Q8NI27 1593 aaKnown RBP9.24□□□□□ -0.93
NXF4-202ENST00000416098 TRAK2O60296 914 aa9.23□□□□□ -0.93
NXF4-202ENST00000416098 BANK1Q8NDB2 785 aa9.23□□□□□ -0.93
NXF4-202ENST00000416098 POM121Q96HA1 1249 aa9.23□□□□□ -0.93
NXF4-202ENST00000416098 VPS9D1Q9Y2B5 631 aa9.23□□□□□ -0.93
NXF4-202ENST00000416098 GJA5P36382 358 aa9.22□□□□□ -0.93
NXF4-202ENST00000416098 TMEM259Q4ZIN3 620 aa9.22□□□□□ -0.93
NXF4-202ENST00000416098 RSPH4AQ5TD94 716 aa9.22□□□□□ -0.93
NXF4-202ENST00000416098 ZNF687Q8N1G0 1237 aa9.22□□□□□ -0.93
NXF4-202ENST00000416098 FAM205CA6NFA0 338 aa9.21□□□□□ -0.93
NXF4-202ENST00000416098 SPDYE5A6NIY4 337 aa9.21□□□□□ -0.93
NXF4-202ENST00000416098 APBB1O00213 710 aa9.21□□□□□ -0.93
NXF4-202ENST00000416098 LILRB3O75022 631 aa9.21□□□□□ -0.93
NXF4-202ENST00000416098 PBX2P40425 430 aa9.21□□□□□ -0.93
NXF4-202ENST00000416098 FAM98CQ17RN3 349 aaKnown RBP9.21□□□□□ -0.94
NXF4-202ENST00000416098 RTL5Q5HYW3 569 aaPredicted RBP9.21□□□□□ -0.94
NXF4-202ENST00000416098 FANCD2Q9BXW9 1451 aa9.2□□□□□ -0.94
NXF4-202ENST00000416098 CEP164Q9UPV0 1460 aa9.2□□□□□ -0.94
NXF4-202ENST00000416098 POTEB3A0JP26 581 aa9.2□□□□□ -0.94
NXF4-202ENST00000416098 POTEBQ6S5H4 581 aa9.2□□□□□ -0.94
NXF4-202ENST00000416098 HOXA2O43364 376 aa9.19□□□□□ -0.94
NXF4-202ENST00000416098 HDGFP51858 240 aaKnown RBP9.19□□□□□ -0.94
NXF4-202ENST00000416098 USP46P62068 366 aa9.19□□□□□ -0.94
NXF4-202ENST00000416098 CABLES1Q8TDN4 633 aa9.19□□□□□ -0.94
NXF4-202ENST00000416098 MRC2Q9UBG0 1479 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms