RNA–Protein interactions for RNA: ENST00000415948.5

CRAT-203, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-203ENST00000415948 NRXN3Q9Y4C0 1643 aa22.73■■□□□ 1.23
CRAT-203ENST00000415948 THEMISQ8N1K5 641 aaPredicted RBP22.73■■□□□ 1.23
CRAT-203ENST00000415948 MED14O60244 1454 aa22.72■■□□□ 1.23
CRAT-203ENST00000415948 NUTM2DQ5VT03 806 aaPredicted RBP22.71■■□□□ 1.23
CRAT-203ENST00000415948 STAG3Q9UJ98 1225 aa22.7■■□□□ 1.22
CRAT-203ENST00000415948 SIN3AQ96ST3 1273 aa22.68■■□□□ 1.22
CRAT-203ENST00000415948 NPHP4O75161 1426 aaPredicted RBP22.67■■□□□ 1.22
CRAT-203ENST00000415948 SENP3Q9H4L4 574 aaPredicted RBP22.67■■□□□ 1.22
CRAT-203ENST00000415948 SETD1AO15047 1707 aaKnown RBP22.67■■□□□ 1.22
CRAT-203ENST00000415948 STRCP1A6NGW2 1772 aa22.66■■□□□ 1.22
CRAT-203ENST00000415948 TXNDC2Q86VQ3 553 aa22.65■■□□□ 1.22
CRAT-203ENST00000415948 RGL3Q3MIN7 710 aa22.63■■□□□ 1.21
CRAT-203ENST00000415948 ANKLE2Q86XL3 938 aa22.63■■□□□ 1.21
CRAT-203ENST00000415948 ZNF326Q5BKZ1 582 aaKnown RBP22.62■■□□□ 1.21
CRAT-203ENST00000415948 ADAMTS13Q76LX8 1427 aa22.62■■□□□ 1.21
CRAT-203ENST00000415948 SETBP1Q9Y6X0 1596 aa22.62■■□□□ 1.21
CRAT-203ENST00000415948 PLEKHG1Q9ULL1 1385 aa22.6■■□□□ 1.21
CRAT-203ENST00000415948 ADGRF5Q8IZF2 1346 aa22.57■■□□□ 1.2
CRAT-203ENST00000415948 MYOM2P54296 1465 aa22.57■■□□□ 1.2
CRAT-203ENST00000415948 NRXN1Q9ULB1 1477 aa22.57■■□□□ 1.2
CRAT-203ENST00000415948 ASXL1Q8IXJ9 1541 aa22.57■■□□□ 1.2
CRAT-203ENST00000415948 EID1Q9Y6B2 187 aa22.55■■□□□ 1.2
CRAT-203ENST00000415948 LTBP4Q8N2S1 1624 aa22.55■■□□□ 1.2
CRAT-203ENST00000415948 NEUROD1Q13562 356 aa22.53■■□□□ 1.2
CRAT-203ENST00000415948 SLC26A8Q96RN1 970 aa22.53■■□□□ 1.2
CRAT-203ENST00000415948 PIK3C2GO75747 1445 aa22.53■■□□□ 1.2
CRAT-203ENST00000415948 RPGRIP1LQ68CZ1 1315 aa22.53■■□□□ 1.2
CRAT-203ENST00000415948 ALKQ9UM73 1620 aa22.53■■□□□ 1.2
CRAT-203ENST00000415948 DIP2AQ14689 1571 aa22.52■■□□□ 1.2
CRAT-203ENST00000415948 PPP1R15AO75807 674 aaPredicted RBP22.52■■□□□ 1.2
CRAT-203ENST00000415948 ZNF335Q9H4Z2 1342 aaPredicted RBP22.52■■□□□ 1.2
CRAT-203ENST00000415948 CHD2O14647 1828 aaKnown RBP22.52■■□□□ 1.2
CRAT-203ENST00000415948 NWD1Q149M9 1564 aa22.51■■□□□ 1.19
CRAT-203ENST00000415948 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.51■■□□□ 1.19
CRAT-203ENST00000415948 PTPRUQ92729 1446 aa22.5■■□□□ 1.19
CRAT-203ENST00000415948 XRN1Q8IZH2 1706 aaKnown RBP22.48■■□□□ 1.19
CRAT-203ENST00000415948 XIRP1Q702N8 1843 aaKnown RBP22.47■■□□□ 1.19
CRAT-203ENST00000415948 L3MBTL2Q969R5 705 aa22.47■■□□□ 1.19
CRAT-203ENST00000415948 METP08581 1390 aa22.47■■□□□ 1.19
CRAT-203ENST00000415948 DCAF11Q8TEB1 546 aa22.45■■□□□ 1.18
CRAT-203ENST00000415948 DMRT2Q9Y5R5 561 aa22.45■■□□□ 1.18
CRAT-203ENST00000415948 KDM2AQ9Y2K7 1162 aa22.44■■□□□ 1.18
CRAT-203ENST00000415948 LAMC1P11047 1609 aa22.43■■□□□ 1.18
CRAT-203ENST00000415948 VGFO15240 615 aaPredicted RBP22.43■■□□□ 1.18
CRAT-203ENST00000415948 ADGRB1O14514 1584 aa22.42■■□□□ 1.18
CRAT-203ENST00000415948 PRAG1Q86YV5 1406 aa22.42■■□□□ 1.18
CRAT-203ENST00000415948 CCER1Q8TC90 406 aaPredicted RBP22.42■■□□□ 1.18
CRAT-203ENST00000415948 HDGFP51858 240 aaKnown RBP22.41■■□□□ 1.18
CRAT-203ENST00000415948 BCANQ96GW7 911 aa22.41■■□□□ 1.18
CRAT-203ENST00000415948 TRPM1Q7Z4N2 1603 aa22.4■■□□□ 1.18
CRAT-203ENST00000415948 TBX22Q9Y458 520 aa22.4■■□□□ 1.18
CRAT-203ENST00000415948 KIAA1210Q9ULL0 1709 aa22.38■■□□□ 1.17
CRAT-203ENST00000415948 CFAP70Q5T0N1 1121 aa22.38■■□□□ 1.17
CRAT-203ENST00000415948 KNDC1Q76NI1 1749 aa22.37■■□□□ 1.17
CRAT-203ENST00000415948 LRRC7Q96NW7 1537 aa22.37■■□□□ 1.17
CRAT-203ENST00000415948 CLSPNQ9HAW4 1339 aa22.37■■□□□ 1.17
CRAT-203ENST00000415948 NBPF8Q3BBV2 869 aa22.36■■□□□ 1.17
CRAT-203ENST00000415948 CPS1P31327 1500 aa22.35■■□□□ 1.17
CRAT-203ENST00000415948 TONSLQ96HA7 1378 aa22.35■■□□□ 1.17
CRAT-203ENST00000415948 NKTRP30414 1462 aaKnown RBP22.34■■□□□ 1.17
CRAT-203ENST00000415948 TMEM132EQ6IEE7 984 aa22.34■■□□□ 1.17
CRAT-203ENST00000415948 C14orf93Q9H972 538 aaKnown RBP22.34■■□□□ 1.17
CRAT-203ENST00000415948 KCNA6P17658 529 aa22.33■■□□□ 1.17
CRAT-203ENST00000415948 PIK3R4Q99570 1358 aa22.33■■□□□ 1.17
CRAT-203ENST00000415948 RBM33Q96EV2 1170 aaKnown RBP22.32■■□□□ 1.16
CRAT-203ENST00000415948 NALCNQ8IZF0 1738 aa22.31■■□□□ 1.16
CRAT-203ENST00000415948 ARHGEF28Q8N1W1 1705 aaKnown RBP22.31■■□□□ 1.16
CRAT-203ENST00000415948 ROBO2Q9HCK4 1378 aa22.3■■□□□ 1.16
CRAT-203ENST00000415948 NBPF1Q3BBV0 1214 aa22.3■■□□□ 1.16
CRAT-203ENST00000415948 YTHDC2Q9H6S0 1430 aaKnown RBP22.3■■□□□ 1.16
CRAT-203ENST00000415948 AMOTL2Q9Y2J4 779 aa22.29■■□□□ 1.16
CRAT-203ENST00000415948 TECPR2O15040 1411 aa22.28■■□□□ 1.16
CRAT-203ENST00000415948 LRPPRCP42704 1394 aaKnown RBP22.27■■□□□ 1.16
CRAT-203ENST00000415948 PTCH1Q13635 1447 aa22.27■■□□□ 1.16
CRAT-203ENST00000415948 PLEKHH1Q9ULM0 1364 aa22.26■■□□□ 1.15
CRAT-203ENST00000415948 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.26■■□□□ 1.15
CRAT-203ENST00000415948 TMEM94Q12767 1356 aa22.25■■□□□ 1.15
CRAT-203ENST00000415948 RALGAPBQ86X10 1494 aa22.25■■□□□ 1.15
CRAT-203ENST00000415948 STAC3Q96MF2 364 aa22.24■■□□□ 1.15
CRAT-203ENST00000415948 STK26Q9P289 416 aa22.23■■□□□ 1.15
CRAT-203ENST00000415948 DLC1Q96QB1 1528 aa22.22■■□□□ 1.15
CRAT-203ENST00000415948 CERKQ8TCT0 537 aa22.22■■□□□ 1.15
CRAT-203ENST00000415948 ABCC11Q96J66 1382 aa22.22■■□□□ 1.15
CRAT-203ENST00000415948 PROSER2Q86WR7 435 aaPredicted RBP22.19■■□□□ 1.14
CRAT-203ENST00000415948 IQSEC2Q5JU85 1478 aa22.19■■□□□ 1.14
CRAT-203ENST00000415948 GPRASP1Q5JY77 1395 aa22.18■■□□□ 1.14
CRAT-203ENST00000415948 WAPLQ7Z5K2 1190 aa22.17■■□□□ 1.14
CRAT-203ENST00000415948 ADGRL3Q9HAR2 1447 aa22.15■■□□□ 1.14
CRAT-203ENST00000415948 TRAK1Q9UPV9 953 aa22.15■■□□□ 1.14
CRAT-203ENST00000415948 ROCK2O75116 1388 aaKnown RBP22.14■■□□□ 1.14
CRAT-203ENST00000415948 QRICH2Q9H0J4 1663 aa22.14■■□□□ 1.14
CRAT-203ENST00000415948 FAM135BQ49AJ0 1406 aa22.14■■□□□ 1.13
CRAT-203ENST00000415948 TIMELESSQ9UNS1 1208 aa22.12■■□□□ 1.13
CRAT-203ENST00000415948 PRAM1Q96QH2 718 aa22.11■■□□□ 1.13
CRAT-203ENST00000415948 ADGRB2O60241 1585 aa22.11■■□□□ 1.13
CRAT-203ENST00000415948 CDC42BPGQ6DT37 1551 aa22.1■■□□□ 1.13
CRAT-203ENST00000415948 NCOA3Q9Y6Q9 1424 aa22.1■■□□□ 1.13
CRAT-203ENST00000415948 FMN2Q9NZ56 1722 aa22.09■■□□□ 1.13
CRAT-203ENST00000415948 SAFB2Q14151 953 aaKnown RBP eCLIP22.09■■□□□ 1.13
CRAT-203ENST00000415948 USP32Q8NFA0 1604 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms