RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 SLC26A8Q96RN1 970 aa20.42■□□□□ 0.86
CPNE1-209ENST00000415920 ANKRD50Q9ULJ7 1429 aa20.42■□□□□ 0.86
CPNE1-209ENST00000415920 TMEM94Q12767 1356 aa20.41■□□□□ 0.86
CPNE1-209ENST00000415920 RGS17Q9UGC6 210 aaPredicted RBP20.4■□□□□ 0.86
CPNE1-209ENST00000415920 MYO5BQ9ULV0 1848 aa20.4■□□□□ 0.86
CPNE1-209ENST00000415920 PCGF6Q9BYE7 350 aa20.37■□□□□ 0.85
CPNE1-209ENST00000415920 NWD1Q149M9 1564 aa20.37■□□□□ 0.85
CPNE1-209ENST00000415920 ROBO1Q9Y6N7 1651 aa20.36■□□□□ 0.85
CPNE1-209ENST00000415920 KCNA6P17658 529 aa20.36■□□□□ 0.85
CPNE1-209ENST00000415920 FAM135BQ49AJ0 1406 aa20.35■□□□□ 0.85
CPNE1-209ENST00000415920 SETD5Q9C0A6 1442 aa20.35■□□□□ 0.85
CPNE1-209ENST00000415920 PROSER2Q86WR7 435 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-209ENST00000415920 IQGAP3Q86VI3 1631 aa20.33■□□□□ 0.84
CPNE1-209ENST00000415920 ZFYVE9O95405 1425 aa20.33■□□□□ 0.84
CPNE1-209ENST00000415920 RAB3GAP2Q9H2M9 1393 aa20.33■□□□□ 0.84
CPNE1-209ENST00000415920 TMEM131LA2VDJ0 1609 aa20.31■□□□□ 0.84
CPNE1-209ENST00000415920 NKTRP30414 1462 aaKnown RBP20.3■□□□□ 0.84
CPNE1-209ENST00000415920 RPRD2Q5VT52 1461 aaKnown RBP20.3■□□□□ 0.84
CPNE1-209ENST00000415920 SLC52A1Q9NWF4 448 aa20.3■□□□□ 0.84
CPNE1-209ENST00000415920 CHD2O14647 1828 aaKnown RBP20.29■□□□□ 0.84
CPNE1-209ENST00000415920 RIMS2Q9UQ26 1411 aa20.28■□□□□ 0.84
CPNE1-209ENST00000415920 BCANQ96GW7 911 aa20.28■□□□□ 0.84
CPNE1-209ENST00000415920 E9PCH4 1651 aa20.28■□□□□ 0.84
CPNE1-209ENST00000415920 PLEKHG1Q9ULL1 1385 aa20.26■□□□□ 0.83
CPNE1-209ENST00000415920 NUTM2DQ5VT03 806 aaPredicted RBP20.24■□□□□ 0.83
CPNE1-209ENST00000415920 POTEAQ6S8J7 498 aa20.24■□□□□ 0.83
CPNE1-209ENST00000415920 MSH6P52701 1360 aa20.23■□□□□ 0.83
CPNE1-209ENST00000415920 PHLPP1O60346 1717 aa20.23■□□□□ 0.83
CPNE1-209ENST00000415920 PPP1R15AO75807 674 aaPredicted RBP20.22■□□□□ 0.83
CPNE1-209ENST00000415920 ADAMTS13Q76LX8 1427 aa20.21■□□□□ 0.83
CPNE1-209ENST00000415920 CHGAP10645 457 aaKnown RBP20.2■□□□□ 0.82
CPNE1-209ENST00000415920 SLAIN2Q9P270 581 aa20.2■□□□□ 0.82
CPNE1-209ENST00000415920 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
CPNE1-209ENST00000415920 NUP155O75694 1391 aa20.19■□□□□ 0.82
CPNE1-209ENST00000415920 SPHKAPQ2M3C7 1700 aa20.19■□□□□ 0.82
CPNE1-209ENST00000415920 COL16A1Q07092 1604 aaPredicted RBP20.18■□□□□ 0.82
CPNE1-209ENST00000415920 SETD1AO15047 1707 aaKnown RBP20.17■□□□□ 0.82
CPNE1-209ENST00000415920 TBX22Q9Y458 520 aa20.16■□□□□ 0.82
CPNE1-209ENST00000415920 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.16■□□□□ 0.82
CPNE1-209ENST00000415920 LRP6O75581 1613 aa20.13■□□□□ 0.81
CPNE1-209ENST00000415920 PTPRUQ92729 1446 aa20.13■□□□□ 0.81
CPNE1-209ENST00000415920 DIP2AQ14689 1571 aa20.12■□□□□ 0.81
CPNE1-209ENST00000415920 JCADQ9P266 1359 aa20.12■□□□□ 0.81
CPNE1-209ENST00000415920 NRXN3Q9Y4C0 1643 aa20.12■□□□□ 0.81
CPNE1-209ENST00000415920 HDGFP51858 240 aaKnown RBP20.11■□□□□ 0.81
CPNE1-209ENST00000415920 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.11■□□□□ 0.81
CPNE1-209ENST00000415920 ACIN1Q9UKV3 1341 aaKnown RBP20.1■□□□□ 0.81
CPNE1-209ENST00000415920 C14orf37Q86TY3 774 aa20.1■□□□□ 0.81
CPNE1-209ENST00000415920 TRPM2O94759 1503 aa20.09■□□□□ 0.81
CPNE1-209ENST00000415920 NCOA3Q9Y6Q9 1424 aa20.09■□□□□ 0.81
CPNE1-209ENST00000415920 AHDC1Q5TGY3 1603 aaPredicted RBP20.08■□□□□ 0.8
CPNE1-209ENST00000415920 HRCP23327 699 aa20.07■□□□□ 0.8
CPNE1-209ENST00000415920 XRN1Q8IZH2 1706 aaKnown RBP20.07■□□□□ 0.8
CPNE1-209ENST00000415920 PIK3R4Q99570 1358 aa20.07■□□□□ 0.8
CPNE1-209ENST00000415920 SLC4A1APQ9BWU0 796 aaKnown RBP20.06■□□□□ 0.8
CPNE1-209ENST00000415920 AMOTL2Q9Y2J4 779 aa20.06■□□□□ 0.8
CPNE1-209ENST00000415920 C19orf44Q9H6X5 657 aa20.05■□□□□ 0.8
CPNE1-209ENST00000415920 SHPRHQ149N8 1683 aa20.04■□□□□ 0.8
CPNE1-209ENST00000415920 SETBP1Q9Y6X0 1596 aa20.04■□□□□ 0.8
CPNE1-209ENST00000415920 ATF3P18847 181 aa20.03■□□□□ 0.8
CPNE1-209ENST00000415920 CADPS2Q86UW7 1296 aa20.03■□□□□ 0.8
CPNE1-209ENST00000415920 DHX57Q6P158 1386 aaKnown RBP20.03■□□□□ 0.8
CPNE1-209ENST00000415920 KIF1BO60333 1816 aa20.02■□□□□ 0.8
CPNE1-209ENST00000415920 BRINP3Q76B58 766 aa20.02■□□□□ 0.8
CPNE1-209ENST00000415920 MPHOSPH9Q99550 1183 aa20.02■□□□□ 0.8
CPNE1-209ENST00000415920 CLTCL1P53675 1640 aa20.02■□□□□ 0.79
CPNE1-209ENST00000415920 METP08581 1390 aa20.01■□□□□ 0.79
CPNE1-209ENST00000415920 SPATA31A6Q5VVP1 1343 aa20■□□□□ 0.79
CPNE1-209ENST00000415920 ASXL1Q8IXJ9 1541 aa19.99■□□□□ 0.79
CPNE1-209ENST00000415920 NEXMIFQ5QGS0 1516 aa19.98■□□□□ 0.79
CPNE1-209ENST00000415920 MST1RQ04912 1400 aa19.98■□□□□ 0.79
CPNE1-209ENST00000415920 FOXD1Q16676 465 aa19.97■□□□□ 0.79
CPNE1-209ENST00000415920 ZNF326Q5BKZ1 582 aaKnown RBP19.97■□□□□ 0.79
CPNE1-209ENST00000415920 MEX3CQ5U5Q3 659 aaKnown RBP19.97■□□□□ 0.79
CPNE1-209ENST00000415920 NHSL1Q5SYE7 1610 aa19.96■□□□□ 0.79
CPNE1-209ENST00000415920 NALCNQ8IZF0 1738 aa19.96■□□□□ 0.79
CPNE1-209ENST00000415920 DCCP43146 1447 aa19.95■□□□□ 0.78
CPNE1-209ENST00000415920 NUTM2BA6NNL0 878 aaPredicted RBP19.94■□□□□ 0.78
CPNE1-209ENST00000415920 NUTM2EB1AL46 878 aaPredicted RBP19.94■□□□□ 0.78
CPNE1-209ENST00000415920 NUTM2AQ8IVF1 878 aaPredicted RBP19.94■□□□□ 0.78
CPNE1-209ENST00000415920 DDX17Q92841 729 aaKnown RBP19.94■□□□□ 0.78
CPNE1-209ENST00000415920 ADGRL3Q9HAR2 1447 aa19.91■□□□□ 0.78
CPNE1-209ENST00000415920 ZNF772Q68DY9 489 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-209ENST00000415920 CCDC144AA2RUR9 1427 aa19.9■□□□□ 0.78
CPNE1-209ENST00000415920 ANKRD30BQ9BXX2 1392 aa19.87■□□□□ 0.77
CPNE1-209ENST00000415920 CCER1Q8TC90 406 aaPredicted RBP19.87■□□□□ 0.77
CPNE1-209ENST00000415920 UPF1Q92900 1129 aaKnown RBP eCLIP19.87■□□□□ 0.77
CPNE1-209ENST00000415920 AFF2P51816 1311 aa19.86■□□□□ 0.77
CPNE1-209ENST00000415920 IFT172Q9UG01 1749 aa19.85■□□□□ 0.77
CPNE1-209ENST00000415920 PNPLA6Q8IY17 1366 aa19.85■□□□□ 0.77
CPNE1-209ENST00000415920 ROBO2Q9HCK4 1378 aa19.84■□□□□ 0.77
CPNE1-209ENST00000415920 C1orf167Q5SNV9 1468 aa19.84■□□□□ 0.77
CPNE1-209ENST00000415920 RXRBP28702 533 aa19.83■□□□□ 0.77
CPNE1-209ENST00000415920 PPLO60437 1756 aa19.83■□□□□ 0.76
CPNE1-209ENST00000415920 LRRC59Q96AG4 307 aaKnown RBP19.81■□□□□ 0.76
CPNE1-209ENST00000415920 C8orf37Q96NL8 207 aa19.81■□□□□ 0.76
CPNE1-209ENST00000415920 PTCH1Q13635 1447 aa19.81■□□□□ 0.76
CPNE1-209ENST00000415920 LAMC1P11047 1609 aa19.8■□□□□ 0.76
CPNE1-209ENST00000415920 CDK12Q9NYV4 1490 aaPredicted RBP19.79■□□□□ 0.76
CPNE1-209ENST00000415920 RGS12O14924 1447 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms