RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.9■□□□□ 0.94
SGCE-202ENST00000415788 EID1Q9Y6B2 187 aa20.89■□□□□ 0.93
SGCE-202ENST00000415788 STAC3Q96MF2 364 aa20.88■□□□□ 0.93
SGCE-202ENST00000415788 ZFYVE9O95405 1425 aa20.88■□□□□ 0.93
SGCE-202ENST00000415788 RIMS2Q9UQ26 1411 aa20.88■□□□□ 0.93
SGCE-202ENST00000415788 TONSLQ96HA7 1378 aa20.87■□□□□ 0.93
SGCE-202ENST00000415788 ANKLE2Q86XL3 938 aa20.87■□□□□ 0.93
SGCE-202ENST00000415788 TIMELESSQ9UNS1 1208 aa20.87■□□□□ 0.93
SGCE-202ENST00000415788 HSPA2P54652 639 aa20.86■□□□□ 0.93
SGCE-202ENST00000415788 NEXMIFQ5QGS0 1516 aa20.86■□□□□ 0.93
SGCE-202ENST00000415788 MYO5BQ9ULV0 1848 aa20.86■□□□□ 0.93
SGCE-202ENST00000415788 VGFO15240 615 aaPredicted RBP20.85■□□□□ 0.93
SGCE-202ENST00000415788 TXNDC2Q86VQ3 553 aa20.85■□□□□ 0.93
SGCE-202ENST00000415788 SCAF11Q99590 1463 aaKnown RBP20.84■□□□□ 0.93
SGCE-202ENST00000415788 PPP1R15AO75807 674 aaPredicted RBP20.84■□□□□ 0.93
SGCE-202ENST00000415788 L3MBTL2Q969R5 705 aa20.83■□□□□ 0.92
SGCE-202ENST00000415788 DCAF11Q8TEB1 546 aa20.82■□□□□ 0.92
SGCE-202ENST00000415788 MYOM2P54296 1465 aa20.82■□□□□ 0.92
SGCE-202ENST00000415788 LTKP29376 864 aa20.81■□□□□ 0.92
SGCE-202ENST00000415788 PPLO60437 1756 aa20.8■□□□□ 0.92
SGCE-202ENST00000415788 MYT1Q01538 1121 aa20.79■□□□□ 0.92
SGCE-202ENST00000415788 PLEKHG1Q9ULL1 1385 aa20.79■□□□□ 0.92
SGCE-202ENST00000415788 MED14O60244 1454 aa20.78■□□□□ 0.92
SGCE-202ENST00000415788 IFT172Q9UG01 1749 aa20.78■□□□□ 0.92
SGCE-202ENST00000415788 CENPBP07199 599 aaPredicted RBP20.78■□□□□ 0.92
SGCE-202ENST00000415788 NUTM2DQ5VT03 806 aaPredicted RBP20.77■□□□□ 0.92
SGCE-202ENST00000415788 NCKAP5LQ9HCH0 1330 aa20.77■□□□□ 0.92
SGCE-202ENST00000415788 NRXN1Q9ULB1 1477 aa20.76■□□□□ 0.91
SGCE-202ENST00000415788 KDM2AQ9Y2K7 1162 aa20.76■□□□□ 0.91
SGCE-202ENST00000415788 POLR1AO95602 1720 aaPredicted RBP20.76■□□□□ 0.91
SGCE-202ENST00000415788 NPHP4O75161 1426 aaPredicted RBP20.75■□□□□ 0.91
SGCE-202ENST00000415788 ADGRF5Q8IZF2 1346 aa20.75■□□□□ 0.91
SGCE-202ENST00000415788 DMRT2Q9Y5R5 561 aa20.74■□□□□ 0.91
SGCE-202ENST00000415788 PIK3C2GO75747 1445 aa20.74■□□□□ 0.91
SGCE-202ENST00000415788 SETBP1Q9Y6X0 1596 aa20.73■□□□□ 0.91
SGCE-202ENST00000415788 BCANQ96GW7 911 aa20.72■□□□□ 0.91
SGCE-202ENST00000415788 PRAG1Q86YV5 1406 aa20.71■□□□□ 0.91
SGCE-202ENST00000415788 STRCQ7RTU9 1775 aa20.71■□□□□ 0.91
SGCE-202ENST00000415788 IQGAP1P46940 1657 aa20.7■□□□□ 0.9
SGCE-202ENST00000415788 DIEXFQ68CQ4 756 aaKnown RBP20.7■□□□□ 0.9
SGCE-202ENST00000415788 DIP2AQ14689 1571 aa20.68■□□□□ 0.9
SGCE-202ENST00000415788 ADAMTS13Q76LX8 1427 aa20.68■□□□□ 0.9
SGCE-202ENST00000415788 TBX22Q9Y458 520 aa20.68■□□□□ 0.9
SGCE-202ENST00000415788 C14orf93Q9H972 538 aaKnown RBP20.67■□□□□ 0.9
SGCE-202ENST00000415788 NRXN3Q9Y4C0 1643 aa20.66■□□□□ 0.9
SGCE-202ENST00000415788 SLC26A8Q96RN1 970 aa20.65■□□□□ 0.9
SGCE-202ENST00000415788 LAMC1P11047 1609 aa20.65■□□□□ 0.9
SGCE-202ENST00000415788 ALKQ9UM73 1620 aa20.65■□□□□ 0.9
SGCE-202ENST00000415788 PIK3R4Q99570 1358 aa20.64■□□□□ 0.89
SGCE-202ENST00000415788 CFAP70Q5T0N1 1121 aa20.62■□□□□ 0.89
SGCE-202ENST00000415788 SENP3Q9H4L4 574 aaPredicted RBP20.62■□□□□ 0.89
SGCE-202ENST00000415788 NBPF8Q3BBV2 869 aa20.62■□□□□ 0.89
SGCE-202ENST00000415788 KIAA1210Q9ULL0 1709 aa20.61■□□□□ 0.89
SGCE-202ENST00000415788 RALGAPBQ86X10 1494 aa20.58■□□□□ 0.89
SGCE-202ENST00000415788 METP08581 1390 aa20.58■□□□□ 0.89
SGCE-202ENST00000415788 SETD1AO15047 1707 aaKnown RBP20.58■□□□□ 0.88
SGCE-202ENST00000415788 GTF3C3Q9Y5Q9 886 aa20.58■□□□□ 0.88
SGCE-202ENST00000415788 ROCK2O75116 1388 aaKnown RBP20.57■□□□□ 0.88
SGCE-202ENST00000415788 TRPM1Q7Z4N2 1603 aa20.57■□□□□ 0.88
SGCE-202ENST00000415788 ADGRB1O14514 1584 aa20.55■□□□□ 0.88
SGCE-202ENST00000415788 GPRASP1Q5JY77 1395 aa20.55■□□□□ 0.88
SGCE-202ENST00000415788 ASXL1Q8IXJ9 1541 aa20.55■□□□□ 0.88
SGCE-202ENST00000415788 KCNA6P17658 529 aa20.54■□□□□ 0.88
SGCE-202ENST00000415788 TMEM132EQ6IEE7 984 aa20.54■□□□□ 0.88
SGCE-202ENST00000415788 LRPPRCP42704 1394 aaKnown RBP20.54■□□□□ 0.88
SGCE-202ENST00000415788 NBPF1Q3BBV0 1214 aa20.54■□□□□ 0.88
SGCE-202ENST00000415788 YTHDC2Q9H6S0 1430 aaKnown RBP20.53■□□□□ 0.88
SGCE-202ENST00000415788 ABCC11Q96J66 1382 aa20.52■□□□□ 0.88
SGCE-202ENST00000415788 PTPRUQ92729 1446 aa20.52■□□□□ 0.87
SGCE-202ENST00000415788 AMOTL2Q9Y2J4 779 aa20.52■□□□□ 0.87
SGCE-202ENST00000415788 NWD1Q149M9 1564 aa20.51■□□□□ 0.87
SGCE-202ENST00000415788 TECPR2O15040 1411 aa20.5■□□□□ 0.87
SGCE-202ENST00000415788 CARD11Q9BXL7 1154 aa20.5■□□□□ 0.87
SGCE-202ENST00000415788 NKTRP30414 1462 aaKnown RBP20.49■□□□□ 0.87
SGCE-202ENST00000415788 ZNF335Q9H4Z2 1342 aaPredicted RBP20.49■□□□□ 0.87
SGCE-202ENST00000415788 PTCH1Q13635 1447 aa20.48■□□□□ 0.87
SGCE-202ENST00000415788 XRN1Q8IZH2 1706 aaKnown RBP20.48■□□□□ 0.87
SGCE-202ENST00000415788 CHD2O14647 1828 aaKnown RBP20.48■□□□□ 0.87
SGCE-202ENST00000415788 SIRT1Q96EB6 747 aa20.47■□□□□ 0.87
SGCE-202ENST00000415788 ZNF316A6NFI3 1004 aaPredicted RBP20.47■□□□□ 0.87
SGCE-202ENST00000415788 STK26Q9P289 416 aa20.47■□□□□ 0.87
SGCE-202ENST00000415788 DLC1Q96QB1 1528 aa20.47■□□□□ 0.87
SGCE-202ENST00000415788 CPS1P31327 1500 aa20.46■□□□□ 0.87
SGCE-202ENST00000415788 FAM135BQ49AJ0 1406 aa20.45■□□□□ 0.86
SGCE-202ENST00000415788 EIF3AQ14152 1382 aaKnown RBP20.45■□□□□ 0.86
SGCE-202ENST00000415788 TRAK1Q9UPV9 953 aa20.45■□□□□ 0.86
SGCE-202ENST00000415788 KNDC1Q76NI1 1749 aa20.45■□□□□ 0.86
SGCE-202ENST00000415788 ROBO2Q9HCK4 1378 aa20.43■□□□□ 0.86
SGCE-202ENST00000415788 PROSER2Q86WR7 435 aaPredicted RBP20.41■□□□□ 0.86
SGCE-202ENST00000415788 NCOA3Q9Y6Q9 1424 aa20.4■□□□□ 0.86
SGCE-202ENST00000415788 LTBP4Q8N2S1 1624 aa20.4■□□□□ 0.86
SGCE-202ENST00000415788 POGKQ9P215 609 aa20.39■□□□□ 0.86
SGCE-202ENST00000415788 STRCP1A6NGW2 1772 aa20.39■□□□□ 0.86
SGCE-202ENST00000415788 USP47Q96K76 1375 aa20.39■□□□□ 0.85
SGCE-202ENST00000415788 PRAM1Q96QH2 718 aa20.39■□□□□ 0.85
SGCE-202ENST00000415788 LRRC7Q96NW7 1537 aa20.38■□□□□ 0.85
SGCE-202ENST00000415788 ARHGEF28Q8N1W1 1705 aaKnown RBP20.37■□□□□ 0.85
SGCE-202ENST00000415788 CENPJQ9HC77 1338 aaPredicted RBP20.37■□□□□ 0.85
SGCE-202ENST00000415788 TMEM94Q12767 1356 aa20.37■□□□□ 0.85
SGCE-202ENST00000415788 EIF4G2P78344 907 aaKnown RBP eCLIP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms