RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 RPRD2Q5VT52 1461 aaKnown RBP29.77■■■□□ 2.36
UBXN4-202ENST00000415164 FAM135BQ49AJ0 1406 aa29.77■■■□□ 2.36
UBXN4-202ENST00000415164 RIMS2Q9UQ26 1411 aa29.74■■■□□ 2.35
UBXN4-202ENST00000415164 ITGAEP38570 1179 aa29.74■■■□□ 2.35
UBXN4-202ENST00000415164 HDGFP51858 240 aaKnown RBP29.73■■■□□ 2.35
UBXN4-202ENST00000415164 MSH6P52701 1360 aa29.73■■■□□ 2.35
UBXN4-202ENST00000415164 NUTM2DQ5VT03 806 aaPredicted RBP29.72■■■□□ 2.35
UBXN4-202ENST00000415164 NKTRP30414 1462 aaKnown RBP29.72■■■□□ 2.35
UBXN4-202ENST00000415164 GCC2Q8IWJ2 1684 aa29.7■■■□□ 2.35
UBXN4-202ENST00000415164 ROBO1Q9Y6N7 1651 aa29.7■■■□□ 2.35
UBXN4-202ENST00000415164 PLEKHG1Q9ULL1 1385 aa29.7■■■□□ 2.35
UBXN4-202ENST00000415164 ZFYVE9O95405 1425 aa29.7■■■□□ 2.34
UBXN4-202ENST00000415164 NWD1Q149M9 1564 aa29.69■■■□□ 2.34
UBXN4-202ENST00000415164 C14orf37Q86TY3 774 aa29.68■■■□□ 2.34
UBXN4-202ENST00000415164 RGS17Q9UGC6 210 aaPredicted RBP29.68■■■□□ 2.34
UBXN4-202ENST00000415164 MYO5BQ9ULV0 1848 aa29.67■■■□□ 2.34
UBXN4-202ENST00000415164 PPARGC1BQ86YN6 1023 aaKnown RBP29.66■■■□□ 2.34
UBXN4-202ENST00000415164 UNC13BO14795 1591 aa29.65■■■□□ 2.34
UBXN4-202ENST00000415164 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.65■■■□□ 2.34
UBXN4-202ENST00000415164 SLAIN2Q9P270 581 aa29.64■■■□□ 2.34
UBXN4-202ENST00000415164 TMEM131LA2VDJ0 1609 aa29.63■■■□□ 2.33
UBXN4-202ENST00000415164 NUP155O75694 1391 aa29.61■■■□□ 2.33
UBXN4-202ENST00000415164 ROCK1Q13464 1354 aa29.6■■■□□ 2.33
UBXN4-202ENST00000415164 E9PCH4 1651 aa29.6■■■□□ 2.33
UBXN4-202ENST00000415164 TBX22Q9Y458 520 aa29.59■■■□□ 2.33
UBXN4-202ENST00000415164 CHD2O14647 1828 aaKnown RBP29.55■■■□□ 2.32
UBXN4-202ENST00000415164 POTEAQ6S8J7 498 aa29.55■■■□□ 2.32
UBXN4-202ENST00000415164 IQGAP3Q86VI3 1631 aa29.54■■■□□ 2.32
UBXN4-202ENST00000415164 PHLPP1O60346 1717 aa29.54■■■□□ 2.32
UBXN4-202ENST00000415164 ADAMTS13Q76LX8 1427 aa29.52■■■□□ 2.32
UBXN4-202ENST00000415164 JCADQ9P266 1359 aa29.51■■■□□ 2.31
UBXN4-202ENST00000415164 ATF3P18847 181 aa29.5■■■□□ 2.31
UBXN4-202ENST00000415164 ZNF326Q5BKZ1 582 aaKnown RBP29.49■■■□□ 2.31
UBXN4-202ENST00000415164 AMOTL2Q9Y2J4 779 aa29.47■■■□□ 2.31
UBXN4-202ENST00000415164 DIP2AQ14689 1571 aa29.47■■■□□ 2.31
UBXN4-202ENST00000415164 CADPS2Q86UW7 1296 aa29.46■■■□□ 2.31
UBXN4-202ENST00000415164 NCOA3Q9Y6Q9 1424 aa29.45■■■□□ 2.3
UBXN4-202ENST00000415164 MEX3CQ5U5Q3 659 aaKnown RBP29.44■■■□□ 2.3
UBXN4-202ENST00000415164 C19orf44Q9H6X5 657 aa29.44■■■□□ 2.3
UBXN4-202ENST00000415164 TRPM2O94759 1503 aa29.44■■■□□ 2.3
UBXN4-202ENST00000415164 PIK3R4Q99570 1358 aa29.43■■■□□ 2.3
UBXN4-202ENST00000415164 PTPRUQ92729 1446 aa29.4■■■□□ 2.3
UBXN4-202ENST00000415164 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.4■■■□□ 2.3
UBXN4-202ENST00000415164 COL16A1Q07092 1604 aaPredicted RBP29.39■■■□□ 2.3
UBXN4-202ENST00000415164 SPATA31A6Q5VVP1 1343 aa29.34■■■□□ 2.29
UBXN4-202ENST00000415164 SPHKAPQ2M3C7 1700 aa29.34■■■□□ 2.29
UBXN4-202ENST00000415164 LRP6O75581 1613 aa29.32■■■□□ 2.28
UBXN4-202ENST00000415164 BRINP3Q76B58 766 aa29.32■■■□□ 2.28
UBXN4-202ENST00000415164 NUTM2BA6NNL0 878 aaPredicted RBP29.31■■■□□ 2.28
UBXN4-202ENST00000415164 NUTM2EB1AL46 878 aaPredicted RBP29.31■■■□□ 2.28
UBXN4-202ENST00000415164 NUTM2AQ8IVF1 878 aaPredicted RBP29.31■■■□□ 2.28
UBXN4-202ENST00000415164 AHDC1Q5TGY3 1603 aaPredicted RBP29.3■■■□□ 2.28
UBXN4-202ENST00000415164 SETD1AO15047 1707 aaKnown RBP29.28■■■□□ 2.28
UBXN4-202ENST00000415164 METP08581 1390 aa29.28■■■□□ 2.28
UBXN4-202ENST00000415164 NRXN3Q9Y4C0 1643 aa29.28■■■□□ 2.28
UBXN4-202ENST00000415164 SETBP1Q9Y6X0 1596 aa29.27■■■□□ 2.28
UBXN4-202ENST00000415164 ZNF772Q68DY9 489 aaPredicted RBP29.26■■■□□ 2.27
UBXN4-202ENST00000415164 TRIM52Q96A61 297 aa29.26■■■□□ 2.27
UBXN4-202ENST00000415164 CLTCL1P53675 1640 aa29.24■■■□□ 2.27
UBXN4-202ENST00000415164 DCCP43146 1447 aa29.24■■■□□ 2.27
UBXN4-202ENST00000415164 XRN1Q8IZH2 1706 aaKnown RBP29.24■■■□□ 2.27
UBXN4-202ENST00000415164 ASXL1Q8IXJ9 1541 aa29.22■■■□□ 2.27
UBXN4-202ENST00000415164 SHPRHQ149N8 1683 aa29.21■■■□□ 2.27
UBXN4-202ENST00000415164 MST1RQ04912 1400 aa29.2■■■□□ 2.27
UBXN4-202ENST00000415164 NEXMIFQ5QGS0 1516 aa29.2■■■□□ 2.26
UBXN4-202ENST00000415164 DDX17Q92841 729 aaKnown RBP29.19■■■□□ 2.26
UBXN4-202ENST00000415164 NAIPQ13075 1403 aa29.19■■■□□ 2.26
UBXN4-202ENST00000415164 RRBP1Q9P2E9 1410 aaKnown RBP29.17■■■□□ 2.26
UBXN4-202ENST00000415164 ADGRL3Q9HAR2 1447 aa29.16■■■□□ 2.26
UBXN4-202ENST00000415164 RXRBP28702 533 aa29.13■■■□□ 2.25
UBXN4-202ENST00000415164 LRRC59Q96AG4 307 aaKnown RBP29.13■■■□□ 2.25
UBXN4-202ENST00000415164 KIF1BO60333 1816 aa29.13■■■□□ 2.25
UBXN4-202ENST00000415164 SLC4A1APQ9BWU0 796 aaKnown RBP29.12■■■□□ 2.25
UBXN4-202ENST00000415164 AFF2P51816 1311 aa29.12■■■□□ 2.25
UBXN4-202ENST00000415164 VGFO15240 615 aaPredicted RBP29.11■■■□□ 2.25
UBXN4-202ENST00000415164 SETD5Q9C0A6 1442 aa29.11■■■□□ 2.25
UBXN4-202ENST00000415164 C8orf37Q96NL8 207 aa29.1■■■□□ 2.25
UBXN4-202ENST00000415164 NALCNQ8IZF0 1738 aa29.09■■■□□ 2.25
UBXN4-202ENST00000415164 NHSL1Q5SYE7 1610 aa29.08■■■□□ 2.25
UBXN4-202ENST00000415164 C1orf167Q5SNV9 1468 aa29.04■■■□□ 2.24
UBXN4-202ENST00000415164 PNPLA6Q8IY17 1366 aa29.04■■■□□ 2.24
UBXN4-202ENST00000415164 ROBO2Q9HCK4 1378 aa29.04■■■□□ 2.24
UBXN4-202ENST00000415164 UPF1Q92900 1129 aaKnown RBP eCLIP29.04■■■□□ 2.24
UBXN4-202ENST00000415164 HFM1A2PYH4 1435 aa29.03■■■□□ 2.24
UBXN4-202ENST00000415164 ADAMTS2O95450 1211 aa29.03■■■□□ 2.24
UBXN4-202ENST00000415164 FOXD1Q16676 465 aa29.03■■■□□ 2.24
UBXN4-202ENST00000415164 ORAI2Q96SN7 254 aa29.02■■■□□ 2.24
UBXN4-202ENST00000415164 PTCH1Q13635 1447 aa29.02■■■□□ 2.24
UBXN4-202ENST00000415164 RPGRIP1LQ68CZ1 1315 aa29.01■■■□□ 2.23
UBXN4-202ENST00000415164 NGLY1Q96IV0 654 aa28.98■■■□□ 2.23
UBXN4-202ENST00000415164 QTRT2Q9H974 415 aaKnown RBP28.98■■■□□ 2.23
UBXN4-202ENST00000415164 RGL3Q3MIN7 710 aa28.94■■■□□ 2.22
UBXN4-202ENST00000415164 RBM6P78332 1123 aaKnown RBP28.92■■■□□ 2.22
UBXN4-202ENST00000415164 STK26Q9P289 416 aa28.92■■■□□ 2.22
UBXN4-202ENST00000415164 CDK12Q9NYV4 1490 aaPredicted RBP28.91■■■□□ 2.22
UBXN4-202ENST00000415164 ESCO1Q5FWF5 840 aa28.9■■■□□ 2.22
UBXN4-202ENST00000415164 PPLO60437 1756 aa28.9■■■□□ 2.22
UBXN4-202ENST00000415164 SOS2Q07890 1332 aaPredicted RBP28.9■■■□□ 2.22
UBXN4-202ENST00000415164 CCDC144AA2RUR9 1427 aa28.89■■■□□ 2.22
UBXN4-202ENST00000415164 RGS12O14924 1447 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms