RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ZEB1P37275 1124 aaPredicted RBP19.21■□□□□ 0.67
CNN3-203ENST00000415017 TMEM2Q9UHN6 1383 aa19.2■□□□□ 0.66
CNN3-203ENST00000415017 LMTK3Q96Q04 1460 aa19.19■□□□□ 0.66
CNN3-203ENST00000415017 RGL3Q3MIN7 710 aa19.18■□□□□ 0.66
CNN3-203ENST00000415017 PLPPR3Q6T4P5 718 aa19.18■□□□□ 0.66
CNN3-203ENST00000415017 THEMISQ8N1K5 641 aaPredicted RBP19.18■□□□□ 0.66
CNN3-203ENST00000415017 RIMS2Q9UQ26 1411 aa19.17■□□□□ 0.66
CNN3-203ENST00000415017 KIAA1210Q9ULL0 1709 aa19.17■□□□□ 0.66
CNN3-203ENST00000415017 DCAF11Q8TEB1 546 aa19.16■□□□□ 0.66
CNN3-203ENST00000415017 PRAG1Q86YV5 1406 aa19.16■□□□□ 0.66
CNN3-203ENST00000415017 CHGAP10645 457 aaKnown RBP19.15■□□□□ 0.66
CNN3-203ENST00000415017 TRPM1Q7Z4N2 1603 aa19.14■□□□□ 0.66
CNN3-203ENST00000415017 NRXN3Q9Y4C0 1643 aa19.14■□□□□ 0.66
CNN3-203ENST00000415017 STAG3Q9UJ98 1225 aa19.14■□□□□ 0.65
CNN3-203ENST00000415017 PIK3C2GO75747 1445 aa19.14■□□□□ 0.65
CNN3-203ENST00000415017 POLR1AO95602 1720 aaPredicted RBP19.14■□□□□ 0.65
CNN3-203ENST00000415017 ZNF326Q5BKZ1 582 aaKnown RBP19.13■□□□□ 0.65
CNN3-203ENST00000415017 SETD1AO15047 1707 aaKnown RBP19.13■□□□□ 0.65
CNN3-203ENST00000415017 SETBP1Q9Y6X0 1596 aa19.12■□□□□ 0.65
CNN3-203ENST00000415017 VGFO15240 615 aaPredicted RBP19.12■□□□□ 0.65
CNN3-203ENST00000415017 NBPF8Q3BBV2 869 aa19.12■□□□□ 0.65
CNN3-203ENST00000415017 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.12■□□□□ 0.65
CNN3-203ENST00000415017 LAMC1P11047 1609 aa19.11■□□□□ 0.65
CNN3-203ENST00000415017 ADGRF5Q8IZF2 1346 aa19.11■□□□□ 0.65
CNN3-203ENST00000415017 LTKP29376 864 aa19.11■□□□□ 0.65
CNN3-203ENST00000415017 MED14O60244 1454 aa19.1■□□□□ 0.65
CNN3-203ENST00000415017 SCAF11Q99590 1463 aaKnown RBP19.09■□□□□ 0.65
CNN3-203ENST00000415017 HDGFP51858 240 aaKnown RBP19.09■□□□□ 0.65
CNN3-203ENST00000415017 STRCQ7RTU9 1775 aa19.09■□□□□ 0.65
CNN3-203ENST00000415017 PLEKHG1Q9ULL1 1385 aa19.08■□□□□ 0.65
CNN3-203ENST00000415017 IQGAP1P46940 1657 aa19.08■□□□□ 0.65
CNN3-203ENST00000415017 RALGAPBQ86X10 1494 aa19.08■□□□□ 0.64
CNN3-203ENST00000415017 KDM2AQ9Y2K7 1162 aa19.07■□□□□ 0.64
CNN3-203ENST00000415017 GPRASP1Q5JY77 1395 aa19.06■□□□□ 0.64
CNN3-203ENST00000415017 ALKQ9UM73 1620 aa19.05■□□□□ 0.64
CNN3-203ENST00000415017 TXNDC2Q86VQ3 553 aa19.05■□□□□ 0.64
CNN3-203ENST00000415017 C14orf93Q9H972 538 aaKnown RBP19.05■□□□□ 0.64
CNN3-203ENST00000415017 ADAMTS13Q76LX8 1427 aa19.05■□□□□ 0.64
CNN3-203ENST00000415017 ADGRB1O14514 1584 aa19.05■□□□□ 0.64
CNN3-203ENST00000415017 DIP2AQ14689 1571 aa19.04■□□□□ 0.64
CNN3-203ENST00000415017 ANKLE2Q86XL3 938 aa19.03■□□□□ 0.64
CNN3-203ENST00000415017 EID1Q9Y6B2 187 aa19.03■□□□□ 0.64
CNN3-203ENST00000415017 ASXL1Q8IXJ9 1541 aa19.03■□□□□ 0.64
CNN3-203ENST00000415017 NUTM2DQ5VT03 806 aaPredicted RBP19.02■□□□□ 0.64
CNN3-203ENST00000415017 HSPA2P54652 639 aa18.98■□□□□ 0.63
CNN3-203ENST00000415017 CFAP70Q5T0N1 1121 aa18.98■□□□□ 0.63
CNN3-203ENST00000415017 NPHP4O75161 1426 aaPredicted RBP18.98■□□□□ 0.63
CNN3-203ENST00000415017 NBPF1Q3BBV0 1214 aa18.97■□□□□ 0.63
CNN3-203ENST00000415017 TBX22Q9Y458 520 aa18.97■□□□□ 0.63
CNN3-203ENST00000415017 CHD2O14647 1828 aaKnown RBP18.97■□□□□ 0.63
CNN3-203ENST00000415017 KNDC1Q76NI1 1749 aa18.96■□□□□ 0.63
CNN3-203ENST00000415017 NCKAP5LQ9HCH0 1330 aa18.95■□□□□ 0.62
CNN3-203ENST00000415017 PIK3R4Q99570 1358 aa18.93■□□□□ 0.62
CNN3-203ENST00000415017 XRN1Q8IZH2 1706 aaKnown RBP18.93■□□□□ 0.62
CNN3-203ENST00000415017 ROCK2O75116 1388 aaKnown RBP18.93■□□□□ 0.62
CNN3-203ENST00000415017 METP08581 1390 aa18.93■□□□□ 0.62
CNN3-203ENST00000415017 TECPR2O15040 1411 aa18.92■□□□□ 0.62
CNN3-203ENST00000415017 ARHGEF28Q8N1W1 1705 aaKnown RBP18.91■□□□□ 0.62
CNN3-203ENST00000415017 DLC1Q96QB1 1528 aa18.9■□□□□ 0.62
CNN3-203ENST00000415017 NWD1Q149M9 1564 aa18.9■□□□□ 0.62
CNN3-203ENST00000415017 LRPPRCP42704 1394 aaKnown RBP18.9■□□□□ 0.62
CNN3-203ENST00000415017 PTPRUQ92729 1446 aa18.9■□□□□ 0.62
CNN3-203ENST00000415017 YTHDC2Q9H6S0 1430 aaKnown RBP18.9■□□□□ 0.62
CNN3-203ENST00000415017 ABCC11Q96J66 1382 aa18.89■□□□□ 0.61
CNN3-203ENST00000415017 CPS1P31327 1500 aa18.89■□□□□ 0.61
CNN3-203ENST00000415017 SLC26A8Q96RN1 970 aa18.88■□□□□ 0.61
CNN3-203ENST00000415017 TMEM132EQ6IEE7 984 aa18.87■□□□□ 0.61
CNN3-203ENST00000415017 CARD11Q9BXL7 1154 aa18.87■□□□□ 0.61
CNN3-203ENST00000415017 STRCP1A6NGW2 1772 aa18.86■□□□□ 0.61
CNN3-203ENST00000415017 SIRT1Q96EB6 747 aa18.86■□□□□ 0.61
CNN3-203ENST00000415017 USP47Q96K76 1375 aa18.84■□□□□ 0.61
CNN3-203ENST00000415017 FAM135BQ49AJ0 1406 aa18.83■□□□□ 0.61
CNN3-203ENST00000415017 PTCH1Q13635 1447 aa18.83■□□□□ 0.6
CNN3-203ENST00000415017 DMRT2Q9Y5R5 561 aa18.82■□□□□ 0.6
CNN3-203ENST00000415017 SBNO2Q9Y2G9 1366 aa18.81■□□□□ 0.6
CNN3-203ENST00000415017 BCANQ96GW7 911 aa18.81■□□□□ 0.6
CNN3-203ENST00000415017 QRICH2Q9H0J4 1663 aa18.8■□□□□ 0.6
CNN3-203ENST00000415017 EIF4G2P78344 907 aaKnown RBP eCLIP18.8■□□□□ 0.6
CNN3-203ENST00000415017 SENP3Q9H4L4 574 aaPredicted RBP18.8■□□□□ 0.6
CNN3-203ENST00000415017 KCNA6P17658 529 aa18.79■□□□□ 0.6
CNN3-203ENST00000415017 NKTRP30414 1462 aaKnown RBP18.78■□□□□ 0.6
CNN3-203ENST00000415017 HSPA5P11021 654 aaKnown RBP18.78■□□□□ 0.6
CNN3-203ENST00000415017 TESK2Q96S53 571 aa18.78■□□□□ 0.6
CNN3-203ENST00000415017 AMOTL2Q9Y2J4 779 aa18.78■□□□□ 0.6
CNN3-203ENST00000415017 EIF3AQ14152 1382 aaKnown RBP18.78■□□□□ 0.6
CNN3-203ENST00000415017 ROBO2Q9HCK4 1378 aa18.78■□□□□ 0.6
CNN3-203ENST00000415017 TRAK1Q9UPV9 953 aa18.77■□□□□ 0.6
CNN3-203ENST00000415017 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.77■□□□□ 0.59
CNN3-203ENST00000415017 XIRP1Q702N8 1843 aaKnown RBP18.76■□□□□ 0.59
CNN3-203ENST00000415017 ST20-MTHFSA0A0A6YYL1 179 aa18.75■□□□□ 0.59
CNN3-203ENST00000415017 ADGRB2O60241 1585 aa18.75■□□□□ 0.59
CNN3-203ENST00000415017 STK26Q9P289 416 aa18.74■□□□□ 0.59
CNN3-203ENST00000415017 CENPJQ9HC77 1338 aaPredicted RBP18.74■□□□□ 0.59
CNN3-203ENST00000415017 PLEKHH1Q9ULM0 1364 aa18.73■□□□□ 0.59
CNN3-203ENST00000415017 LTBP4Q8N2S1 1624 aa18.71■□□□□ 0.59
CNN3-203ENST00000415017 PRAM1Q96QH2 718 aa18.71■□□□□ 0.59
CNN3-203ENST00000415017 NCOA3Q9Y6Q9 1424 aa18.71■□□□□ 0.59
CNN3-203ENST00000415017 NALCNQ8IZF0 1738 aa18.71■□□□□ 0.59
CNN3-203ENST00000415017 WAPLQ7Z5K2 1190 aa18.7■□□□□ 0.58
CNN3-203ENST00000415017 TULP4Q9NRJ4 1543 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms