RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 CCDC47Q96A33 483 aaKnown RBP22.62■■□□□ 1.21
SHANK3-202ENST00000414786 MYCNP04198 464 aaPredicted RBP22.62■■□□□ 1.21
SHANK3-202ENST00000414786 PHF14O94880 888 aa22.61■■□□□ 1.21
SHANK3-202ENST00000414786 NUTM2BA6NNL0 878 aaPredicted RBP22.61■■□□□ 1.21
SHANK3-202ENST00000414786 NUTM2EB1AL46 878 aaPredicted RBP22.61■■□□□ 1.21
SHANK3-202ENST00000414786 NUTM2AQ8IVF1 878 aaPredicted RBP22.61■■□□□ 1.21
SHANK3-202ENST00000414786 BICD2Q8TD16 824 aa22.6■■□□□ 1.21
SHANK3-202ENST00000414786 HNRNPMP52272 730 aaKnown RBP eCLIP22.6■■□□□ 1.21
SHANK3-202ENST00000414786 WWC2Q6AWC2 1192 aa22.6■■□□□ 1.21
SHANK3-202ENST00000414786 NEXNQ0ZGT2 675 aa22.6■■□□□ 1.21
SHANK3-202ENST00000414786 HDAC5Q9UQL6 1122 aa22.59■■□□□ 1.21
SHANK3-202ENST00000414786 IFIT2P09913 472 aaKnown RBP22.58■■□□□ 1.21
SHANK3-202ENST00000414786 ATP2B1P20020 1258 aa22.58■■□□□ 1.21
SHANK3-202ENST00000414786 CENPJQ9HC77 1338 aaPredicted RBP22.58■■□□□ 1.2
SHANK3-202ENST00000414786 WASHC4Q2M389 1173 aa22.58■■□□□ 1.2
SHANK3-202ENST00000414786 TRDNQ13061 729 aa22.57■■□□□ 1.2
SHANK3-202ENST00000414786 DDX49Q9Y6V7 483 aaKnown RBP22.57■■□□□ 1.2
SHANK3-202ENST00000414786 PDILTQ8N807 584 aa22.57■■□□□ 1.2
SHANK3-202ENST00000414786 ANKRD62A6NC57 917 aa22.56■■□□□ 1.2
SHANK3-202ENST00000414786 VPS37CA5D8V6 355 aaPredicted RBP22.55■■□□□ 1.2
SHANK3-202ENST00000414786 MINK1Q8N4C8 1332 aaPredicted RBP22.55■■□□□ 1.2
SHANK3-202ENST00000414786 RUFY1Q96T51 708 aa22.54■■□□□ 1.2
SHANK3-202ENST00000414786 ANKRD20A12PQ8NF67 263 aa22.54■■□□□ 1.2
SHANK3-202ENST00000414786 PAXIP1Q6ZW49 1069 aaPredicted RBP22.54■■□□□ 1.2
SHANK3-202ENST00000414786 OFD1O75665 1012 aa22.53■■□□□ 1.2
SHANK3-202ENST00000414786 CPLX2Q6PUV4 134 aaKnown RBP22.53■■□□□ 1.2
SHANK3-202ENST00000414786 COG3Q96JB2 828 aa22.52■■□□□ 1.2
SHANK3-202ENST00000414786 SF3B2Q13435 895 aaKnown RBP22.52■■□□□ 1.2
SHANK3-202ENST00000414786 RBM5P52756 815 aaKnown RBP eCLIP22.51■■□□□ 1.198e-6■■■■□ 20.7
SHANK3-202ENST00000414786 CEP162Q5TB80 1403 aa22.51■■□□□ 1.19
SHANK3-202ENST00000414786 BRPF1P55201 1214 aaPredicted RBP22.51■■□□□ 1.19
SHANK3-202ENST00000414786 MAP7D2Q96T17 732 aa22.5■■□□□ 1.19
SHANK3-202ENST00000414786 CHMP4AQ9BY43 222 aa22.49■■□□□ 1.19
SHANK3-202ENST00000414786 PIP4K2BP78356 416 aa22.49■■□□□ 1.19
SHANK3-202ENST00000414786 GPS2Q13227 327 aa22.49■■□□□ 1.19
SHANK3-202ENST00000414786 STRN4Q9NRL3 753 aa22.49■■□□□ 1.19
SHANK3-202ENST00000414786 NEFHP12036 1026 aa22.49■■□□□ 1.19
SHANK3-202ENST00000414786 BAZ1BQ9UIG0 1483 aaKnown RBP22.48■■□□□ 1.19
SHANK3-202ENST00000414786 LMOD3Q0VAK6 560 aa22.48■■□□□ 1.19
SHANK3-202ENST00000414786 PLCD3Q8N3E9 789 aa22.48■■□□□ 1.19
SHANK3-202ENST00000414786 RBM42Q9BTD8 480 aaKnown RBP22.48■■□□□ 1.19
SHANK3-202ENST00000414786 ZHX3Q9H4I2 956 aa22.48■■□□□ 1.19
SHANK3-202ENST00000414786 CAGE1Q8TC20 777 aa22.48■■□□□ 1.19
SHANK3-202ENST00000414786 NUP155O75694 1391 aa22.47■■□□□ 1.19
SHANK3-202ENST00000414786 CYB5RLQ6IPT4 315 aa22.47■■□□□ 1.19
SHANK3-202ENST00000414786 CCDC180Q9P1Z9 1646 aa22.47■■□□□ 1.19
SHANK3-202ENST00000414786 RIC3Q7Z5B4 369 aa22.46■■□□□ 1.19
SHANK3-202ENST00000414786 G3BP1Q13283 466 aaKnown RBP eCLIP22.45■■□□□ 1.19
SHANK3-202ENST00000414786 FKBP5Q13451 457 aaPredicted RBP22.44■■□□□ 1.18
SHANK3-202ENST00000414786 MATR3P43243 847 aaKnown RBP eCLIP22.43■■□□□ 1.183e-7■■■□□ 18
SHANK3-202ENST00000414786 SPDYE4A6NLX3 237 aa22.43■■□□□ 1.18
SHANK3-202ENST00000414786 NLRP2Q9NX02 1062 aa22.43■■□□□ 1.18
SHANK3-202ENST00000414786 FAM161AQ3B820 660 aa22.43■■□□□ 1.18
SHANK3-202ENST00000414786 GOLGA3Q08378 1498 aa22.42■■□□□ 1.18
SHANK3-202ENST00000414786 HMOX1P09601 288 aa22.42■■□□□ 1.18
SHANK3-202ENST00000414786 KRT18P05783 430 aaKnown RBP22.41■■□□□ 1.18
SHANK3-202ENST00000414786 LRRFIP1Q32MZ4 808 aaKnown RBP22.4■■□□□ 1.18
SHANK3-202ENST00000414786 ATF3P18847 181 aa22.4■■□□□ 1.18
SHANK3-202ENST00000414786 HSP90AA2PQ14568 343 aaPredicted RBP22.4■■□□□ 1.18
SHANK3-202ENST00000414786 ZKSCAN1P17029 563 aaPredicted RBP22.4■■□□□ 1.18
SHANK3-202ENST00000414786 COG6Q9Y2V7 657 aa22.4■■□□□ 1.18
SHANK3-202ENST00000414786 TTC16Q8NEE8 873 aa22.4■■□□□ 1.18
SHANK3-202ENST00000414786 HOOK1Q9UJC3 728 aaKnown RBP22.39■■□□□ 1.18
SHANK3-202ENST00000414786 DNAJC2Q99543 621 aaKnown RBP22.39■■□□□ 1.17
SHANK3-202ENST00000414786 FAM13BQ9NYF5 915 aa22.39■■□□□ 1.17
SHANK3-202ENST00000414786 SAFBQ15424 915 aaKnown RBP eCLIP22.38■■□□□ 1.17
SHANK3-202ENST00000414786 PIBF1Q8WXW3 757 aa22.38■■□□□ 1.17
SHANK3-202ENST00000414786 CEBPZQ03701 1054 aaKnown RBP22.38■■□□□ 1.17
SHANK3-202ENST00000414786 TIMELESSQ9UNS1 1208 aa22.38■■□□□ 1.17
SHANK3-202ENST00000414786 CDK5RAP3Q96JB5 506 aa22.38■■□□□ 1.17
SHANK3-202ENST00000414786 SASS6Q6UVJ0 657 aa22.37■■□□□ 1.17
SHANK3-202ENST00000414786 RALYLQ86SE5 291 aaKnown RBP22.37■■□□□ 1.17
SHANK3-202ENST00000414786 PDCL3Q9H2J4 239 aa22.37■■□□□ 1.17
SHANK3-202ENST00000414786 IFT57Q9NWB7 429 aa22.37■■□□□ 1.17
SHANK3-202ENST00000414786 EIF3AQ14152 1382 aaKnown RBP22.37■■□□□ 1.17
SHANK3-202ENST00000414786 PSMD1Q99460 953 aa22.37■■□□□ 1.17
SHANK3-202ENST00000414786 SPINK5Q9NQ38 1064 aaPredicted RBP22.37■■□□□ 1.17
SHANK3-202ENST00000414786 FMNL2Q96PY5 1086 aa22.36■■□□□ 1.17
SHANK3-202ENST00000414786 SYCP1Q15431 976 aa22.35■■□□□ 1.17
SHANK3-202ENST00000414786 RUFY2Q8WXA3 655 aa22.35■■□□□ 1.17
SHANK3-202ENST00000414786 MPHOSPH10O00566 681 aaKnown RBP22.34■■□□□ 1.17
SHANK3-202ENST00000414786 DDX58O95786 925 aaKnown RBP22.34■■□□□ 1.17
SHANK3-202ENST00000414786 SEPT11Q9NVA2 429 aaKnown RBP22.33■■□□□ 1.17
SHANK3-202ENST00000414786 NEBLO76041 1014 aa22.33■■□□□ 1.17
SHANK3-202ENST00000414786 MPHOSPH9Q99550 1183 aa22.33■■□□□ 1.16
SHANK3-202ENST00000414786 RAPGEF4Q8WZA2 1011 aa22.33■■□□□ 1.16
SHANK3-202ENST00000414786 TSPYL4Q9UJ04 414 aa22.33■■□□□ 1.16
SHANK3-202ENST00000414786 ATP6V1DQ9Y5K8 247 aa22.32■■□□□ 1.16
SHANK3-202ENST00000414786 EFCAB2Q5VUJ9 269 aa22.32■■□□□ 1.16
SHANK3-202ENST00000414786 SMC3Q9UQE7 1217 aa22.32■■□□□ 1.16
SHANK3-202ENST00000414786 KIF27Q86VH2 1401 aa22.32■■□□□ 1.16
SHANK3-202ENST00000414786 MNS1Q8NEH6 495 aa22.32■■□□□ 1.16
SHANK3-202ENST00000414786 ZSCAN29Q8IWY8 852 aaPredicted RBP22.31■■□□□ 1.16
SHANK3-202ENST00000414786 PANK3Q9H999 370 aa22.31■■□□□ 1.16
SHANK3-202ENST00000414786 BRMS1Q9HCU9 246 aa22.31■■□□□ 1.16
SHANK3-202ENST00000414786 GRM1Q13255 1194 aa22.31■■□□□ 1.16
SHANK3-202ENST00000414786 RALBP1Q15311 655 aa22.31■■□□□ 1.16
SHANK3-202ENST00000414786 BICDL1Q6ZP65 573 aa22.31■■□□□ 1.16
SHANK3-202ENST00000414786 CCDC173Q0VFZ6 552 aa22.31■■□□□ 1.16
SHANK3-202ENST00000414786 DDX11L8A8MPP1 907 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms