RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 KIF1BO60333 1816 aa24.18■■□□□ 1.46
LINC00398-201ENST00000414407 RIMS2Q9UQ26 1411 aa24.18■■□□□ 1.46
LINC00398-201ENST00000414407 MYO5BQ9ULV0 1848 aa24.17■■□□□ 1.46
LINC00398-201ENST00000414407 NPHP4O75161 1426 aaPredicted RBP24.17■■□□□ 1.46
LINC00398-201ENST00000414407 ZNF326Q5BKZ1 582 aaKnown RBP24.14■■□□□ 1.45
LINC00398-201ENST00000414407 RPGRIP1LQ68CZ1 1315 aa24.13■■□□□ 1.45
LINC00398-201ENST00000414407 SPATA31E1Q6ZUB1 1445 aa24.12■■□□□ 1.45
LINC00398-201ENST00000414407 DHX57Q6P158 1386 aaKnown RBP24.12■■□□□ 1.45
LINC00398-201ENST00000414407 PPP1R15AO75807 674 aaPredicted RBP24.1■■□□□ 1.45
LINC00398-201ENST00000414407 PLEKHG1Q9ULL1 1385 aa24.1■■□□□ 1.45
LINC00398-201ENST00000414407 IQGAP1P46940 1657 aa24.1■■□□□ 1.45
LINC00398-201ENST00000414407 NEXMIFQ5QGS0 1516 aa24.08■■□□□ 1.45
LINC00398-201ENST00000414407 VGFO15240 615 aaPredicted RBP24.05■■□□□ 1.44
LINC00398-201ENST00000414407 RGL3Q3MIN7 710 aa24.03■■□□□ 1.44
LINC00398-201ENST00000414407 NUTM2DQ5VT03 806 aaPredicted RBP24.03■■□□□ 1.44
LINC00398-201ENST00000414407 BCANQ96GW7 911 aa24■■□□□ 1.43
LINC00398-201ENST00000414407 TBX22Q9Y458 520 aa24■■□□□ 1.43
LINC00398-201ENST00000414407 PPLO60437 1756 aa23.99■■□□□ 1.43
LINC00398-201ENST00000414407 SLC26A8Q96RN1 970 aa23.98■■□□□ 1.43
LINC00398-201ENST00000414407 SETBP1Q9Y6X0 1596 aa23.98■■□□□ 1.43
LINC00398-201ENST00000414407 DIP2AQ14689 1571 aa23.97■■□□□ 1.43
LINC00398-201ENST00000414407 ADAMTS13Q76LX8 1427 aa23.97■■□□□ 1.43
LINC00398-201ENST00000414407 STAC3Q96MF2 364 aa23.97■■□□□ 1.43
LINC00398-201ENST00000414407 ZNF335Q9H4Z2 1342 aaPredicted RBP23.97■■□□□ 1.43
LINC00398-201ENST00000414407 IFT172Q9UG01 1749 aa23.96■■□□□ 1.43
LINC00398-201ENST00000414407 LTBP4Q8N2S1 1624 aa23.94■■□□□ 1.42
LINC00398-201ENST00000414407 MYOM2P54296 1465 aa23.94■■□□□ 1.42
LINC00398-201ENST00000414407 PIK3R4Q99570 1358 aa23.93■■□□□ 1.42
LINC00398-201ENST00000414407 NRXN3Q9Y4C0 1643 aa23.92■■□□□ 1.42
LINC00398-201ENST00000414407 ADGRF5Q8IZF2 1346 aa23.92■■□□□ 1.42
LINC00398-201ENST00000414407 KCNA6P17658 529 aa23.91■■□□□ 1.42
LINC00398-201ENST00000414407 SIN3AQ96ST3 1273 aa23.91■■□□□ 1.42
LINC00398-201ENST00000414407 CPS1P31327 1500 aa23.9■■□□□ 1.42
LINC00398-201ENST00000414407 NRXN1Q9ULB1 1477 aa23.9■■□□□ 1.42
LINC00398-201ENST00000414407 SENP3Q9H4L4 574 aaPredicted RBP23.89■■□□□ 1.41
LINC00398-201ENST00000414407 DCAF11Q8TEB1 546 aa23.88■■□□□ 1.41
LINC00398-201ENST00000414407 CLSPNQ9HAW4 1339 aa23.87■■□□□ 1.41
LINC00398-201ENST00000414407 PIK3C2GO75747 1445 aa23.87■■□□□ 1.41
LINC00398-201ENST00000414407 CERKQ8TCT0 537 aa23.86■■□□□ 1.41
LINC00398-201ENST00000414407 ALKQ9UM73 1620 aa23.85■■□□□ 1.41
LINC00398-201ENST00000414407 NEUROD1Q13562 356 aa23.85■■□□□ 1.41
LINC00398-201ENST00000414407 NWD1Q149M9 1564 aa23.85■■□□□ 1.41
LINC00398-201ENST00000414407 IQSEC2Q5JU85 1478 aa23.83■■□□□ 1.41
LINC00398-201ENST00000414407 METP08581 1390 aa23.83■■□□□ 1.41
LINC00398-201ENST00000414407 STRCP1A6NGW2 1772 aa23.83■■□□□ 1.4
LINC00398-201ENST00000414407 CHD2O14647 1828 aaKnown RBP23.82■■□□□ 1.4
LINC00398-201ENST00000414407 NKTRP30414 1462 aaKnown RBP23.82■■□□□ 1.4
LINC00398-201ENST00000414407 KDM2AQ9Y2K7 1162 aa23.82■■□□□ 1.4
LINC00398-201ENST00000414407 C14orf93Q9H972 538 aaKnown RBP23.81■■□□□ 1.4
LINC00398-201ENST00000414407 SETD1AO15047 1707 aaKnown RBP23.81■■□□□ 1.4
LINC00398-201ENST00000414407 L3MBTL2Q969R5 705 aa23.8■■□□□ 1.4
LINC00398-201ENST00000414407 PTPRUQ92729 1446 aa23.79■■□□□ 1.4
LINC00398-201ENST00000414407 AMOTL2Q9Y2J4 779 aa23.79■■□□□ 1.4
LINC00398-201ENST00000414407 LRRC7Q96NW7 1537 aa23.79■■□□□ 1.4
LINC00398-201ENST00000414407 LAMC1P11047 1609 aa23.77■■□□□ 1.4
LINC00398-201ENST00000414407 PRAG1Q86YV5 1406 aa23.76■■□□□ 1.39
LINC00398-201ENST00000414407 CFAP70Q5T0N1 1121 aa23.75■■□□□ 1.39
LINC00398-201ENST00000414407 PROSER2Q86WR7 435 aaPredicted RBP23.75■■□□□ 1.39
LINC00398-201ENST00000414407 CCER1Q8TC90 406 aaPredicted RBP23.75■■□□□ 1.39
LINC00398-201ENST00000414407 XRN1Q8IZH2 1706 aaKnown RBP23.74■■□□□ 1.39
LINC00398-201ENST00000414407 TONSLQ96HA7 1378 aa23.74■■□□□ 1.39
LINC00398-201ENST00000414407 NCOA3Q9Y6Q9 1424 aa23.74■■□□□ 1.39
LINC00398-201ENST00000414407 TMEM94Q12767 1356 aa23.72■■□□□ 1.39
LINC00398-201ENST00000414407 LRPPRCP42704 1394 aaKnown RBP23.71■■□□□ 1.39
LINC00398-201ENST00000414407 PTCH1Q13635 1447 aa23.7■■□□□ 1.38
LINC00398-201ENST00000414407 TIMELESSQ9UNS1 1208 aa23.7■■□□□ 1.38
LINC00398-201ENST00000414407 ASXL1Q8IXJ9 1541 aa23.69■■□□□ 1.38
LINC00398-201ENST00000414407 ABCC11Q96J66 1382 aa23.69■■□□□ 1.38
LINC00398-201ENST00000414407 TMEM132EQ6IEE7 984 aa23.69■■□□□ 1.38
LINC00398-201ENST00000414407 TECPR2O15040 1411 aa23.68■■□□□ 1.38
LINC00398-201ENST00000414407 YTHDC2Q9H6S0 1430 aaKnown RBP23.67■■□□□ 1.38
LINC00398-201ENST00000414407 ADGRB1O14514 1584 aa23.67■■□□□ 1.38
LINC00398-201ENST00000414407 KIAA1210Q9ULL0 1709 aa23.67■■□□□ 1.38
LINC00398-201ENST00000414407 SIRT1Q96EB6 747 aa23.66■■□□□ 1.38
LINC00398-201ENST00000414407 XIRP1Q702N8 1843 aaKnown RBP23.65■■□□□ 1.38
LINC00398-201ENST00000414407 ROBO2Q9HCK4 1378 aa23.64■■□□□ 1.37
LINC00398-201ENST00000414407 STK26Q9P289 416 aa23.63■■□□□ 1.37
LINC00398-201ENST00000414407 KNDC1Q76NI1 1749 aa23.62■■□□□ 1.37
LINC00398-201ENST00000414407 FBXO41Q8TF61 875 aa23.62■■□□□ 1.37
LINC00398-201ENST00000414407 RBM33Q96EV2 1170 aaKnown RBP23.62■■□□□ 1.37
LINC00398-201ENST00000414407 MSH6P52701 1360 aa23.61■■□□□ 1.37
LINC00398-201ENST00000414407 FAM135BQ49AJ0 1406 aa23.6■■□□□ 1.37
LINC00398-201ENST00000414407 TOM1O60784 492 aa23.6■■□□□ 1.37
LINC00398-201ENST00000414407 C19orf44Q9H6X5 657 aa23.6■■□□□ 1.37
LINC00398-201ENST00000414407 DLC1Q96QB1 1528 aa23.59■■□□□ 1.37
LINC00398-201ENST00000414407 UBAP1LF5GYI3 381 aa23.58■■□□□ 1.37
LINC00398-201ENST00000414407 NBPF8Q3BBV2 869 aa23.58■■□□□ 1.37
LINC00398-201ENST00000414407 C14orf37Q86TY3 774 aa23.58■■□□□ 1.37
LINC00398-201ENST00000414407 NBPF1Q3BBV0 1214 aa23.57■■□□□ 1.36
LINC00398-201ENST00000414407 DCCP43146 1447 aa23.56■■□□□ 1.36
LINC00398-201ENST00000414407 ADGRL3Q9HAR2 1447 aa23.56■■□□□ 1.36
LINC00398-201ENST00000414407 TRPM1Q7Z4N2 1603 aa23.55■■□□□ 1.36
LINC00398-201ENST00000414407 WAPLQ7Z5K2 1190 aa23.54■■□□□ 1.36
LINC00398-201ENST00000414407 CADPS2Q86UW7 1296 aa23.54■■□□□ 1.36
LINC00398-201ENST00000414407 TRAK1Q9UPV9 953 aa23.54■■□□□ 1.36
LINC00398-201ENST00000414407 ROCK2O75116 1388 aaKnown RBP23.52■■□□□ 1.36
LINC00398-201ENST00000414407 GPRASP1Q5JY77 1395 aa23.52■■□□□ 1.36
LINC00398-201ENST00000414407 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.51■■□□□ 1.35
LINC00398-201ENST00000414407 ATF3P18847 181 aa23.51■■□□□ 1.35
LINC00398-201ENST00000414407 PRAM1Q96QH2 718 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms