RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 BCANQ96GW7 911 aa31.35■■■□□ 2.61
LMBR1-203ENST00000414218 SENP3Q9H4L4 574 aaPredicted RBP31.34■■■□□ 2.61
LMBR1-203ENST00000414218 ZFYVE9O95405 1425 aa31.32■■■□□ 2.61
LMBR1-203ENST00000414218 RIMS2Q9UQ26 1411 aa31.32■■■□□ 2.61
LMBR1-203ENST00000414218 XIRP1Q702N8 1843 aaKnown RBP31.31■■■□□ 2.6
LMBR1-203ENST00000414218 KCNA6P17658 529 aa31.31■■■□□ 2.6
LMBR1-203ENST00000414218 HDGFP51858 240 aaKnown RBP31.3■■■□□ 2.6
LMBR1-203ENST00000414218 PPP1R15AO75807 674 aaPredicted RBP31.29■■■□□ 2.6
LMBR1-203ENST00000414218 ILDR2Q71H61 639 aa31.28■■■□□ 2.6
LMBR1-203ENST00000414218 PLEKHG1Q9ULL1 1385 aa31.26■■■□□ 2.59
LMBR1-203ENST00000414218 PROSER2Q86WR7 435 aaPredicted RBP31.24■■■□□ 2.59
LMBR1-203ENST00000414218 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.24■■■□□ 2.59
LMBR1-203ENST00000414218 TMEM94Q12767 1356 aa31.23■■■□□ 2.59
LMBR1-203ENST00000414218 NUTM2DQ5VT03 806 aaPredicted RBP31.23■■■□□ 2.59
LMBR1-203ENST00000414218 NAIPQ13075 1403 aa31.23■■■□□ 2.59
LMBR1-203ENST00000414218 RBM33Q96EV2 1170 aaKnown RBP31.21■■■□□ 2.59
LMBR1-203ENST00000414218 NWD1Q149M9 1564 aa31.18■■■□□ 2.58
LMBR1-203ENST00000414218 SPHKAPQ2M3C7 1700 aa31.18■■■□□ 2.58
LMBR1-203ENST00000414218 TBX22Q9Y458 520 aa31.16■■■□□ 2.58
LMBR1-203ENST00000414218 NKTRP30414 1462 aaKnown RBP31.15■■■□□ 2.58
LMBR1-203ENST00000414218 CHD2O14647 1828 aaKnown RBP31.15■■■□□ 2.58
LMBR1-203ENST00000414218 HFM1A2PYH4 1435 aa31.1■■■□□ 2.57
LMBR1-203ENST00000414218 ADAMTS13Q76LX8 1427 aa31.1■■■□□ 2.57
LMBR1-203ENST00000414218 TRIM52Q96A61 297 aa31.1■■■□□ 2.57
LMBR1-203ENST00000414218 MED1Q15648 1581 aaPredicted RBP31.09■■■□□ 2.57
LMBR1-203ENST00000414218 ZNF326Q5BKZ1 582 aaKnown RBP31.07■■■□□ 2.56
LMBR1-203ENST00000414218 DIP2AQ14689 1571 aa31.05■■■□□ 2.56
LMBR1-203ENST00000414218 FAM135BQ49AJ0 1406 aa31.05■■■□□ 2.56
LMBR1-203ENST00000414218 MSH6P52701 1360 aa31.05■■■□□ 2.56
LMBR1-203ENST00000414218 CLTCL1P53675 1640 aa31.04■■■□□ 2.56
LMBR1-203ENST00000414218 TRPM2O94759 1503 aa31.02■■■□□ 2.56
LMBR1-203ENST00000414218 PIK3R4Q99570 1358 aa31.01■■■□□ 2.55
LMBR1-203ENST00000414218 SOCS7O14512 581 aa31■■■□□ 2.55
LMBR1-203ENST00000414218 SLC4A1APQ9BWU0 796 aaKnown RBP30.99■■■□□ 2.55
LMBR1-203ENST00000414218 ROBO1Q9Y6N7 1651 aa30.98■■■□□ 2.55
LMBR1-203ENST00000414218 KIF1BO60333 1816 aa30.96■■■□□ 2.55
LMBR1-203ENST00000414218 SLAIN2Q9P270 581 aa30.96■■■□□ 2.55
LMBR1-203ENST00000414218 AMOTL2Q9Y2J4 779 aa30.96■■■□□ 2.55
LMBR1-203ENST00000414218 NRXN3Q9Y4C0 1643 aa30.95■■■□□ 2.55
LMBR1-203ENST00000414218 C14orf37Q86TY3 774 aa30.95■■■□□ 2.55
LMBR1-203ENST00000414218 PTPRUQ92729 1446 aa30.95■■■□□ 2.54
LMBR1-203ENST00000414218 NCOA3Q9Y6Q9 1424 aa30.94■■■□□ 2.54
LMBR1-203ENST00000414218 SETBP1Q9Y6X0 1596 aa30.94■■■□□ 2.54
LMBR1-203ENST00000414218 NEXMIFQ5QGS0 1516 aa30.93■■■□□ 2.54
LMBR1-203ENST00000414218 PHF23Q9BUL5 403 aaPredicted RBP30.91■■■□□ 2.54
LMBR1-203ENST00000414218 FOXD1Q16676 465 aa30.87■■■□□ 2.53
LMBR1-203ENST00000414218 C19orf44Q9H6X5 657 aa30.87■■■□□ 2.53
LMBR1-203ENST00000414218 METP08581 1390 aa30.87■■■□□ 2.53
LMBR1-203ENST00000414218 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.87■■■□□ 2.53
LMBR1-203ENST00000414218 ATF3P18847 181 aa30.84■■■□□ 2.53
LMBR1-203ENST00000414218 XRN1Q8IZH2 1706 aaKnown RBP30.84■■■□□ 2.53
LMBR1-203ENST00000414218 CADPS2Q86UW7 1296 aa30.83■■■□□ 2.53
LMBR1-203ENST00000414218 PHLPP1O60346 1717 aa30.81■■■□□ 2.52
LMBR1-203ENST00000414218 VGFO15240 615 aaPredicted RBP30.8■■■□□ 2.52
LMBR1-203ENST00000414218 MPHOSPH9Q99550 1183 aa30.78■■■□□ 2.52
LMBR1-203ENST00000414218 RPGRIP1LQ68CZ1 1315 aa30.77■■■□□ 2.52
LMBR1-203ENST00000414218 PPLO60437 1756 aa30.73■■■□□ 2.51
LMBR1-203ENST00000414218 RGS17Q9UGC6 210 aaPredicted RBP30.71■■■□□ 2.51
LMBR1-203ENST00000414218 CCDC144AA2RUR9 1427 aa30.7■■■□□ 2.5
LMBR1-203ENST00000414218 DCCP43146 1447 aa30.7■■■□□ 2.5
LMBR1-203ENST00000414218 SETD1AO15047 1707 aaKnown RBP30.7■■■□□ 2.5
LMBR1-203ENST00000414218 SETD5Q9C0A6 1442 aa30.69■■■□□ 2.5
LMBR1-203ENST00000414218 COL16A1Q07092 1604 aaPredicted RBP30.69■■■□□ 2.5
LMBR1-203ENST00000414218 JCADQ9P266 1359 aa30.68■■■□□ 2.5
LMBR1-203ENST00000414218 RGL3Q3MIN7 710 aa30.67■■■□□ 2.5
LMBR1-203ENST00000414218 BRINP3Q76B58 766 aa30.67■■■□□ 2.5
LMBR1-203ENST00000414218 AHDC1Q5TGY3 1603 aaPredicted RBP30.65■■■□□ 2.5
LMBR1-203ENST00000414218 ADGRL3Q9HAR2 1447 aa30.64■■■□□ 2.5
LMBR1-203ENST00000414218 NALCNQ8IZF0 1738 aa30.63■■■□□ 2.49
LMBR1-203ENST00000414218 ACIN1Q9UKV3 1341 aaKnown RBP30.63■■■□□ 2.49
LMBR1-203ENST00000414218 MST1RQ04912 1400 aa30.63■■■□□ 2.49
LMBR1-203ENST00000414218 SPATA31E1Q6ZUB1 1445 aa30.63■■■□□ 2.49
LMBR1-203ENST00000414218 ADGRF5Q8IZF2 1346 aa30.61■■■□□ 2.49
LMBR1-203ENST00000414218 ROBO2Q9HCK4 1378 aa30.61■■■□□ 2.49
LMBR1-203ENST00000414218 PTCH1Q13635 1447 aa30.6■■■□□ 2.49
LMBR1-203ENST00000414218 ASXL1Q8IXJ9 1541 aa30.58■■■□□ 2.49
LMBR1-203ENST00000414218 RAB3GAP2Q9H2M9 1393 aa30.57■■■□□ 2.48
LMBR1-203ENST00000414218 IFT172Q9UG01 1749 aa30.56■■■□□ 2.48
LMBR1-203ENST00000414218 ANKRD30BQ9BXX2 1392 aa30.55■■■□□ 2.48
LMBR1-203ENST00000414218 POTEAQ6S8J7 498 aa30.55■■■□□ 2.48
LMBR1-203ENST00000414218 PRAG1Q86YV5 1406 aa30.54■■■□□ 2.48
LMBR1-203ENST00000414218 SPATA31A6Q5VVP1 1343 aa30.53■■■□□ 2.48
LMBR1-203ENST00000414218 SHPRHQ149N8 1683 aa30.52■■■□□ 2.48
LMBR1-203ENST00000414218 DDX17Q92841 729 aaKnown RBP30.5■■■□□ 2.47
LMBR1-203ENST00000414218 LRP6O75581 1613 aa30.5■■■□□ 2.47
LMBR1-203ENST00000414218 NHSL1Q5SYE7 1610 aa30.5■■■□□ 2.47
LMBR1-203ENST00000414218 STK26Q9P289 416 aa30.49■■■□□ 2.47
LMBR1-203ENST00000414218 C1orf167Q5SNV9 1468 aa30.49■■■□□ 2.47
LMBR1-203ENST00000414218 MEX3CQ5U5Q3 659 aaKnown RBP30.47■■■□□ 2.47
LMBR1-203ENST00000414218 TMEM132EQ6IEE7 984 aa30.46■■■□□ 2.47
LMBR1-203ENST00000414218 NUTM2BA6NNL0 878 aaPredicted RBP30.44■■■□□ 2.46
LMBR1-203ENST00000414218 NUTM2EB1AL46 878 aaPredicted RBP30.44■■■□□ 2.46
LMBR1-203ENST00000414218 NUTM2AQ8IVF1 878 aaPredicted RBP30.44■■■□□ 2.46
LMBR1-203ENST00000414218 PIK3C2GO75747 1445 aa30.44■■■□□ 2.46
LMBR1-203ENST00000414218 LRRC59Q96AG4 307 aaKnown RBP30.43■■■□□ 2.46
LMBR1-203ENST00000414218 ORAI2Q96SN7 254 aa30.43■■■□□ 2.46
LMBR1-203ENST00000414218 LRPPRCP42704 1394 aaKnown RBP30.42■■■□□ 2.46
LMBR1-203ENST00000414218 WAPLQ7Z5K2 1190 aa30.42■■■□□ 2.46
LMBR1-203ENST00000414218 ABCC11Q96J66 1382 aa30.39■■■□□ 2.45
LMBR1-203ENST00000414218 TECPR2O15040 1411 aa30.39■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms