RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 COL17A1Q9UMD9 1497 aaPredicted RBP18.83■□□□□ 0.6
SNHG17-202ENST00000414142 REREQ9P2R6 1566 aa18.83■□□□□ 0.6
SNHG17-202ENST00000414142 CFAP70Q5T0N1 1121 aa18.82■□□□□ 0.6
SNHG17-202ENST00000414142 SCAF11Q99590 1463 aaKnown RBP18.82■□□□□ 0.6
SNHG17-202ENST00000414142 SYNMO15061 1565 aa18.82■□□□□ 0.6
SNHG17-202ENST00000414142 AGLP35573 1532 aa18.81■□□□□ 0.6
SNHG17-202ENST00000414142 DISP3Q9P2K9 1392 aa18.81■□□□□ 0.6
SNHG17-202ENST00000414142 RPGRIP1LQ68CZ1 1315 aa18.8■□□□□ 0.6
SNHG17-202ENST00000414142 PPLO60437 1756 aa18.8■□□□□ 0.6
SNHG17-202ENST00000414142 PIK3C2BO00750 1634 aa18.8■□□□□ 0.6
SNHG17-202ENST00000414142 CCDC184Q52MB2 194 aa18.79■□□□□ 0.6
SNHG17-202ENST00000414142 PPP6R1Q9UPN7 881 aa18.79■□□□□ 0.6
SNHG17-202ENST00000414142 NRXN1Q9ULB1 1477 aa18.78■□□□□ 0.6
SNHG17-202ENST00000414142 IDI1Q13907 227 aa18.78■□□□□ 0.6
SNHG17-202ENST00000414142 MRS2Q9HD23 443 aa18.78■□□□□ 0.6
SNHG17-202ENST00000414142 EIF3AQ14152 1382 aaKnown RBP18.78■□□□□ 0.6
SNHG17-202ENST00000414142 PREX1Q8TCU6 1659 aa18.78■□□□□ 0.6
SNHG17-202ENST00000414142 SLC52A1Q9NWF4 448 aa18.77■□□□□ 0.6
SNHG17-202ENST00000414142 MLECQ14165 292 aa18.77■□□□□ 0.6
SNHG17-202ENST00000414142 ARHGEF40Q8TER5 1519 aa18.76■□□□□ 0.59
SNHG17-202ENST00000414142 FBXO31Q5XUX0 539 aaPredicted RBP18.74■□□□□ 0.59
SNHG17-202ENST00000414142 CLTCQ00610 1675 aaKnown RBP18.73■□□□□ 0.59
SNHG17-202ENST00000414142 VGFO15240 615 aaPredicted RBP18.73■□□□□ 0.59
SNHG17-202ENST00000414142 NUTM2DQ5VT03 806 aaPredicted RBP18.73■□□□□ 0.59
SNHG17-202ENST00000414142 PIK3C2GO75747 1445 aa18.73■□□□□ 0.59
SNHG17-202ENST00000414142 CDCA8Q53HL2 280 aa18.72■□□□□ 0.59
SNHG17-202ENST00000414142 C14orf93Q9H972 538 aaKnown RBP18.72■□□□□ 0.59
SNHG17-202ENST00000414142 FAM9BQ8IZU0 186 aa18.71■□□□□ 0.59
SNHG17-202ENST00000414142 HNRNPUQ00839 825 aaKnown RBP eCLIP18.71■□□□□ 0.59
SNHG17-202ENST00000414142 ERVK-7P63135 1459 aa18.7■□□□□ 0.58
SNHG17-202ENST00000414142 NEXMIFQ5QGS0 1516 aa18.7■□□□□ 0.58
SNHG17-202ENST00000414142 ESF1Q9H501 851 aaKnown RBP18.7■□□□□ 0.58
SNHG17-202ENST00000414142 PANK3Q9H999 370 aa18.7■□□□□ 0.58
SNHG17-202ENST00000414142 MYO5BQ9ULV0 1848 aa18.7■□□□□ 0.58
SNHG17-202ENST00000414142 SETBP1Q9Y6X0 1596 aa18.7■□□□□ 0.58
SNHG17-202ENST00000414142 SLC24A1O60721 1099 aa18.68■□□□□ 0.58
SNHG17-202ENST00000414142 RALBP1Q15311 655 aa18.68■□□□□ 0.58
SNHG17-202ENST00000414142 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
SNHG17-202ENST00000414142 PER1O15534 1290 aaPredicted RBP18.67■□□□□ 0.58
SNHG17-202ENST00000414142 STAG3Q9UJ98 1225 aa18.67■□□□□ 0.58
SNHG17-202ENST00000414142 TMEM131LA2VDJ0 1609 aa18.67■□□□□ 0.58
SNHG17-202ENST00000414142 TMEM132EQ6IEE7 984 aa18.66■□□□□ 0.58
SNHG17-202ENST00000414142 TRAK1Q9UPV9 953 aa18.66■□□□□ 0.58
SNHG17-202ENST00000414142 MYBBP1AQ9BQG0 1328 aaKnown RBP18.64■□□□□ 0.57
SNHG17-202ENST00000414142 TRHP20396 242 aaPredicted RBP18.64■□□□□ 0.57
SNHG17-202ENST00000414142 TMC1Q8TDI8 760 aa18.64■□□□□ 0.57
SNHG17-202ENST00000414142 CENPJQ9HC77 1338 aaPredicted RBP18.63■□□□□ 0.57
SNHG17-202ENST00000414142 ZFYVE9O95405 1425 aa18.63■□□□□ 0.57
SNHG17-202ENST00000414142 ADGRB1O14514 1584 aa18.63■□□□□ 0.57
SNHG17-202ENST00000414142 KDM5AP29375 1690 aaKnown RBP18.62■□□□□ 0.57
SNHG17-202ENST00000414142 MYO3AQ8NEV4 1616 aa18.62■□□□□ 0.57
SNHG17-202ENST00000414142 SPATA31D1Q6ZQQ2 1576 aa18.62■□□□□ 0.57
SNHG17-202ENST00000414142 CC2D1BQ5T0F9 858 aaKnown RBP18.61■□□□□ 0.57
SNHG17-202ENST00000414142 SENP3Q9H4L4 574 aaPredicted RBP18.61■□□□□ 0.57
SNHG17-202ENST00000414142 SUPT16HQ9Y5B9 1047 aaKnown RBP18.61■□□□□ 0.57
SNHG17-202ENST00000414142 ZMYM3Q14202 1370 aa18.6■□□□□ 0.57
SNHG17-202ENST00000414142 PARD3Q8TEW0 1356 aa18.59■□□□□ 0.57
SNHG17-202ENST00000414142 BRD4O60885 1362 aaPredicted RBP18.59■□□□□ 0.57
SNHG17-202ENST00000414142 SBNO2Q9Y2G9 1366 aa18.59■□□□□ 0.57
SNHG17-202ENST00000414142 KNSTRNQ9Y448 316 aa18.59■□□□□ 0.57
SNHG17-202ENST00000414142 QRICH2Q9H0J4 1663 aa18.57■□□□□ 0.56
SNHG17-202ENST00000414142 MYOM1P52179 1685 aa18.57■□□□□ 0.56
SNHG17-202ENST00000414142 NLRP13Q86W25 1043 aa18.56■□□□□ 0.56
SNHG17-202ENST00000414142 PNISRQ8TF01 805 aaKnown RBP18.56■□□□□ 0.56
SNHG17-202ENST00000414142 A2ML1A8K2U0 1454 aa18.55■□□□□ 0.56
SNHG17-202ENST00000414142 STK26Q9P289 416 aa18.54■□□□□ 0.56
SNHG17-202ENST00000414142 ARHGEF28Q8N1W1 1705 aaKnown RBP18.52■□□□□ 0.56
SNHG17-202ENST00000414142 ZBED9Q6R2W3 1325 aa18.52■□□□□ 0.55
SNHG17-202ENST00000414142 RIMS2Q9UQ26 1411 aa18.52■□□□□ 0.55
SNHG17-202ENST00000414142 TNRQ92752 1358 aa18.5■□□□□ 0.55
SNHG17-202ENST00000414142 AMER1Q5JTC6 1135 aaPredicted RBP18.5■□□□□ 0.55
SNHG17-202ENST00000414142 ASXL1Q8IXJ9 1541 aa18.5■□□□□ 0.55
SNHG17-202ENST00000414142 ALKQ9UM73 1620 aa18.49■□□□□ 0.55
SNHG17-202ENST00000414142 EVC2Q86UK5 1308 aa18.49■□□□□ 0.55
SNHG17-202ENST00000414142 SAFB2Q14151 953 aaKnown RBP eCLIP18.49■□□□□ 0.55
SNHG17-202ENST00000414142 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.47■□□□□ 0.55
SNHG17-202ENST00000414142 YTHDC2Q9H6S0 1430 aaKnown RBP18.47■□□□□ 0.55
SNHG17-202ENST00000414142 LRPPRCP42704 1394 aaKnown RBP18.47■□□□□ 0.55
SNHG17-202ENST00000414142 NEFLP07196 543 aa18.46■□□□□ 0.55
SNHG17-202ENST00000414142 POGKQ9P215 609 aa18.46■□□□□ 0.55
SNHG17-202ENST00000414142 HDGFP51858 240 aaKnown RBP18.45■□□□□ 0.54
SNHG17-202ENST00000414142 NPC1L1Q9UHC9 1359 aa18.45■□□□□ 0.54
SNHG17-202ENST00000414142 CARD14Q9BXL6 1004 aa18.44■□□□□ 0.54
SNHG17-202ENST00000414142 PUS7Q96PZ0 661 aaKnown RBP18.44■□□□□ 0.54
SNHG17-202ENST00000414142 SLC12A5Q9H2X9 1139 aa18.44■□□□□ 0.54
SNHG17-202ENST00000414142 PPP2R1AP30153 589 aa18.43■□□□□ 0.54
SNHG17-202ENST00000414142 PRAM1Q96QH2 718 aa18.43■□□□□ 0.54
SNHG17-202ENST00000414142 CEBPAP49715 358 aaPredicted RBP18.43■□□□□ 0.54
SNHG17-202ENST00000414142 TULP4Q9NRJ4 1543 aa18.43■□□□□ 0.54
SNHG17-202ENST00000414142 PTPRMP28827 1452 aa18.42■□□□□ 0.54
SNHG17-202ENST00000414142 FKBP8Q14318 412 aa18.42■□□□□ 0.54
SNHG17-202ENST00000414142 CABP2Q9NPB3 220 aa18.41■□□□□ 0.54
SNHG17-202ENST00000414142 PLPPR3Q6T4P5 718 aa18.41■□□□□ 0.54
SNHG17-202ENST00000414142 MINK1Q8N4C8 1332 aaPredicted RBP18.41■□□□□ 0.54
SNHG17-202ENST00000414142 SENP3-EIF4A1A0A087X0R7 540 aa18.4■□□□□ 0.54
SNHG17-202ENST00000414142 SRPK2P78362 688 aaKnown RBP18.4■□□□□ 0.54
SNHG17-202ENST00000414142 BCANQ96GW7 911 aa18.4■□□□□ 0.54
SNHG17-202ENST00000414142 UBR1Q8IWV7 1749 aa18.4■□□□□ 0.54
SNHG17-202ENST00000414142 FER1L4A9Z1Z3 1794 aa18.39■□□□□ 0.53
SNHG17-202ENST00000414142 NSD3Q9BZ95 1437 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms