RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 KCNA6P17658 529 aa25.34■■□□□ 1.65
SCAMP4-204ENST00000414057 SLC26A8Q96RN1 970 aa25.34■■□□□ 1.65
SCAMP4-204ENST00000414057 E9PCH4 1651 aa25.33■■□□□ 1.65
SCAMP4-204ENST00000414057 RIMS2Q9UQ26 1411 aa25.31■■□□□ 1.64
SCAMP4-204ENST00000414057 HSPA1LP34931 641 aa25.3■■□□□ 1.64
SCAMP4-204ENST00000414057 ZFYVE9O95405 1425 aa25.3■■□□□ 1.64
SCAMP4-204ENST00000414057 PLEKHG1Q9ULL1 1385 aa25.3■■□□□ 1.64
SCAMP4-204ENST00000414057 TMEM131LA2VDJ0 1609 aa25.29■■□□□ 1.64
SCAMP4-204ENST00000414057 NAIPQ13075 1403 aa25.25■■□□□ 1.63
SCAMP4-204ENST00000414057 PROSER2Q86WR7 435 aaPredicted RBP25.25■■□□□ 1.63
SCAMP4-204ENST00000414057 TMEM94Q12767 1356 aa25.24■■□□□ 1.63
SCAMP4-204ENST00000414057 TBX22Q9Y458 520 aa25.23■■□□□ 1.63
SCAMP4-204ENST00000414057 NKTRP30414 1462 aaKnown RBP25.23■■□□□ 1.63
SCAMP4-204ENST00000414057 ALKQ9UM73 1620 aa25.22■■□□□ 1.63
SCAMP4-204ENST00000414057 HFM1A2PYH4 1435 aa25.2■■□□□ 1.62
SCAMP4-204ENST00000414057 MYO5BQ9ULV0 1848 aa25.19■■□□□ 1.62
SCAMP4-204ENST00000414057 SENP3Q9H4L4 574 aaPredicted RBP25.19■■□□□ 1.62
SCAMP4-204ENST00000414057 NWD1Q149M9 1564 aa25.18■■□□□ 1.62
SCAMP4-204ENST00000414057 TRIM52Q96A61 297 aa25.18■■□□□ 1.62
SCAMP4-204ENST00000414057 NUTM2DQ5VT03 806 aaPredicted RBP25.17■■□□□ 1.62
SCAMP4-204ENST00000414057 ZNF326Q5BKZ1 582 aaKnown RBP25.15■■□□□ 1.62
SCAMP4-204ENST00000414057 SPHKAPQ2M3C7 1700 aa25.15■■□□□ 1.62
SCAMP4-204ENST00000414057 MSH6P52701 1360 aa25.14■■□□□ 1.62
SCAMP4-204ENST00000414057 PIK3R4Q99570 1358 aa25.14■■□□□ 1.62
SCAMP4-204ENST00000414057 DIP2AQ14689 1571 aa25.14■■□□□ 1.61
SCAMP4-204ENST00000414057 XIRP1Q702N8 1843 aaKnown RBP25.13■■□□□ 1.61
SCAMP4-204ENST00000414057 FAM135BQ49AJ0 1406 aa25.12■■□□□ 1.61
SCAMP4-204ENST00000414057 ADAMTS13Q76LX8 1427 aa25.12■■□□□ 1.61
SCAMP4-204ENST00000414057 ILDR2Q71H61 639 aa25.12■■□□□ 1.61
SCAMP4-204ENST00000414057 RBM33Q96EV2 1170 aaKnown RBP25.11■■□□□ 1.61
SCAMP4-204ENST00000414057 SLC4A1APQ9BWU0 796 aaKnown RBP25.1■■□□□ 1.61
SCAMP4-204ENST00000414057 NCOA3Q9Y6Q9 1424 aa25.1■■□□□ 1.61
SCAMP4-204ENST00000414057 TRPM2O94759 1503 aa25.09■■□□□ 1.61
SCAMP4-204ENST00000414057 CHD2O14647 1828 aaKnown RBP25.09■■□□□ 1.61
SCAMP4-204ENST00000414057 C14orf37Q86TY3 774 aa25.07■■□□□ 1.6
SCAMP4-204ENST00000414057 MED1Q15648 1581 aaPredicted RBP25.04■■□□□ 1.6
SCAMP4-204ENST00000414057 ACIN1Q9UKV3 1341 aaKnown RBP25.04■■□□□ 1.6
SCAMP4-204ENST00000414057 SLAIN2Q9P270 581 aa25.03■■□□□ 1.6
SCAMP4-204ENST00000414057 AMOTL2Q9Y2J4 779 aa25.03■■□□□ 1.6
SCAMP4-204ENST00000414057 SOCS7O14512 581 aa25.02■■□□□ 1.6
SCAMP4-204ENST00000414057 CLTCL1P53675 1640 aa25.02■■□□□ 1.6
SCAMP4-204ENST00000414057 PHF23Q9BUL5 403 aaPredicted RBP25.02■■□□□ 1.6
SCAMP4-204ENST00000414057 SETBP1Q9Y6X0 1596 aa25.01■■□□□ 1.59
SCAMP4-204ENST00000414057 C19orf44Q9H6X5 657 aa25.01■■□□□ 1.59
SCAMP4-204ENST00000414057 CADPS2Q86UW7 1296 aa25■■□□□ 1.59
SCAMP4-204ENST00000414057 VGFO15240 615 aaPredicted RBP24.99■■□□□ 1.59
SCAMP4-204ENST00000414057 RPGRIP1LQ68CZ1 1315 aa24.99■■□□□ 1.59
SCAMP4-204ENST00000414057 ATF3P18847 181 aa24.98■■□□□ 1.59
SCAMP4-204ENST00000414057 KIF1BO60333 1816 aa24.97■■□□□ 1.59
SCAMP4-204ENST00000414057 ROBO1Q9Y6N7 1651 aa24.96■■□□□ 1.59
SCAMP4-204ENST00000414057 NEXMIFQ5QGS0 1516 aa24.96■■□□□ 1.59
SCAMP4-204ENST00000414057 PTPRUQ92729 1446 aa24.95■■□□□ 1.58
SCAMP4-204ENST00000414057 NRXN3Q9Y4C0 1643 aa24.93■■□□□ 1.58
SCAMP4-204ENST00000414057 MPHOSPH9Q99550 1183 aa24.92■■□□□ 1.58
SCAMP4-204ENST00000414057 METP08581 1390 aa24.92■■□□□ 1.58
SCAMP4-204ENST00000414057 CCDC144AA2RUR9 1427 aa24.9■■□□□ 1.58
SCAMP4-204ENST00000414057 FOXD1Q16676 465 aa24.89■■□□□ 1.57
SCAMP4-204ENST00000414057 DCCP43146 1447 aa24.88■■□□□ 1.57
SCAMP4-204ENST00000414057 XRN1Q8IZH2 1706 aaKnown RBP24.87■■□□□ 1.57
SCAMP4-204ENST00000414057 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.87■■□□□ 1.57
SCAMP4-204ENST00000414057 SETD5Q9C0A6 1442 aa24.87■■□□□ 1.57
SCAMP4-204ENST00000414057 JCADQ9P266 1359 aa24.84■■□□□ 1.57
SCAMP4-204ENST00000414057 PHLPP1O60346 1717 aa24.82■■□□□ 1.56
SCAMP4-204ENST00000414057 RGL3Q3MIN7 710 aa24.79■■□□□ 1.56
SCAMP4-204ENST00000414057 ADGRL3Q9HAR2 1447 aa24.79■■□□□ 1.56
SCAMP4-204ENST00000414057 ANKRD30BQ9BXX2 1392 aa24.78■■□□□ 1.56
SCAMP4-204ENST00000414057 BRINP3Q76B58 766 aa24.78■■□□□ 1.56
SCAMP4-204ENST00000414057 PTCH1Q13635 1447 aa24.78■■□□□ 1.56
SCAMP4-204ENST00000414057 HRCP23327 699 aa24.77■■□□□ 1.56
SCAMP4-204ENST00000414057 SPATA31E1Q6ZUB1 1445 aa24.76■■□□□ 1.55
SCAMP4-204ENST00000414057 PPLO60437 1756 aa24.76■■□□□ 1.55
SCAMP4-204ENST00000414057 AHDC1Q5TGY3 1603 aaPredicted RBP24.75■■□□□ 1.55
SCAMP4-204ENST00000414057 SPATA31A6Q5VVP1 1343 aa24.75■■□□□ 1.55
SCAMP4-204ENST00000414057 RAB3GAP2Q9H2M9 1393 aa24.74■■□□□ 1.55
SCAMP4-204ENST00000414057 MST1RQ04912 1400 aa24.74■■□□□ 1.55
SCAMP4-204ENST00000414057 PRAG1Q86YV5 1406 aa24.74■■□□□ 1.55
SCAMP4-204ENST00000414057 COL16A1Q07092 1604 aaPredicted RBP24.73■■□□□ 1.55
SCAMP4-204ENST00000414057 RGS17Q9UGC6 210 aaPredicted RBP24.72■■□□□ 1.55
SCAMP4-204ENST00000414057 ADGRF5Q8IZF2 1346 aa24.72■■□□□ 1.55
SCAMP4-204ENST00000414057 ROBO2Q9HCK4 1378 aa24.72■■□□□ 1.55
SCAMP4-204ENST00000414057 SETD1AO15047 1707 aaKnown RBP24.71■■□□□ 1.55
SCAMP4-204ENST00000414057 ASXL1Q8IXJ9 1541 aa24.7■■□□□ 1.54
SCAMP4-204ENST00000414057 CCER1Q8TC90 406 aaPredicted RBP24.69■■□□□ 1.54
SCAMP4-204ENST00000414057 ZEB1P37275 1124 aaPredicted RBP24.68■■□□□ 1.54
SCAMP4-204ENST00000414057 NALCNQ8IZF0 1738 aa24.66■■□□□ 1.54
SCAMP4-204ENST00000414057 MEX3CQ5U5Q3 659 aaKnown RBP24.66■■□□□ 1.54
SCAMP4-204ENST00000414057 LRRC59Q96AG4 307 aaKnown RBP24.66■■□□□ 1.54
SCAMP4-204ENST00000414057 C1orf167Q5SNV9 1468 aa24.64■■□□□ 1.53
SCAMP4-204ENST00000414057 PIK3C2GO75747 1445 aa24.63■■□□□ 1.53
SCAMP4-204ENST00000414057 LRPPRCP42704 1394 aaKnown RBP24.62■■□□□ 1.53
SCAMP4-204ENST00000414057 STK26Q9P289 416 aa24.62■■□□□ 1.53
SCAMP4-204ENST00000414057 IFT172Q9UG01 1749 aa24.62■■□□□ 1.53
SCAMP4-204ENST00000414057 ABCC11Q96J66 1382 aa24.62■■□□□ 1.53
SCAMP4-204ENST00000414057 SHPRHQ149N8 1683 aa24.62■■□□□ 1.53
SCAMP4-204ENST00000414057 TECPR2O15040 1411 aa24.61■■□□□ 1.53
SCAMP4-204ENST00000414057 POTEAQ6S8J7 498 aa24.6■■□□□ 1.53
SCAMP4-204ENST00000414057 CLSPNQ9HAW4 1339 aa24.6■■□□□ 1.53
SCAMP4-204ENST00000414057 NHSL1Q5SYE7 1610 aa24.59■■□□□ 1.53
SCAMP4-204ENST00000414057 ZNF772Q68DY9 489 aaPredicted RBP24.58■■□□□ 1.53
SCAMP4-204ENST00000414057 TMEM132EQ6IEE7 984 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms