RNA–Protein interactions for RNA: ENST00000413604.5

VGLL4-202, Transcript of vestigial like family member 4, humanhuman

TSL 2 BASIC

Gene VGLL4, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-202ENST00000413604 CHGAP10645 457 aaKnown RBP23.57■■□□□ 1.36
VGLL4-202ENST00000413604 XIRP1Q702N8 1843 aaKnown RBP23.57■■□□□ 1.36
VGLL4-202ENST00000413604 ZFYVE9O95405 1425 aa23.56■■□□□ 1.36
VGLL4-202ENST00000413604 BCANQ96GW7 911 aa23.55■■□□□ 1.36
VGLL4-202ENST00000413604 RIMS2Q9UQ26 1411 aa23.55■■□□□ 1.36
VGLL4-202ENST00000413604 NUTM2DQ5VT03 806 aaPredicted RBP23.52■■□□□ 1.36
VGLL4-202ENST00000413604 ILDR2Q71H61 639 aa23.52■■□□□ 1.36
VGLL4-202ENST00000413604 NAIPQ13075 1403 aa23.51■■□□□ 1.35
VGLL4-202ENST00000413604 PPP1R15AO75807 674 aaPredicted RBP23.51■■□□□ 1.35
VGLL4-202ENST00000413604 KCNA6P17658 529 aa23.51■■□□□ 1.35
VGLL4-202ENST00000413604 RBM33Q96EV2 1170 aaKnown RBP23.51■■□□□ 1.35
VGLL4-202ENST00000413604 PLEKHG1Q9ULL1 1385 aa23.49■■□□□ 1.35
VGLL4-202ENST00000413604 TMEM94Q12767 1356 aa23.48■■□□□ 1.35
VGLL4-202ENST00000413604 HDGFP51858 240 aaKnown RBP23.46■■□□□ 1.35
VGLL4-202ENST00000413604 PROSER2Q86WR7 435 aaPredicted RBP23.46■■□□□ 1.35
VGLL4-202ENST00000413604 SPHKAPQ2M3C7 1700 aa23.46■■□□□ 1.35
VGLL4-202ENST00000413604 NWD1Q149M9 1564 aa23.44■■□□□ 1.34
VGLL4-202ENST00000413604 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.44■■□□□ 1.34
VGLL4-202ENST00000413604 CHD2O14647 1828 aaKnown RBP23.42■■□□□ 1.34
VGLL4-202ENST00000413604 HFM1A2PYH4 1435 aa23.41■■□□□ 1.34
VGLL4-202ENST00000413604 ADAMTS13Q76LX8 1427 aa23.4■■□□□ 1.34
VGLL4-202ENST00000413604 NKTRP30414 1462 aaKnown RBP23.4■■□□□ 1.34
VGLL4-202ENST00000413604 TBX22Q9Y458 520 aa23.4■■□□□ 1.34
VGLL4-202ENST00000413604 TRIM52Q96A61 297 aa23.39■■□□□ 1.33
VGLL4-202ENST00000413604 CLTCL1P53675 1640 aa23.37■■□□□ 1.33
VGLL4-202ENST00000413604 MED1Q15648 1581 aaPredicted RBP23.36■■□□□ 1.33
VGLL4-202ENST00000413604 ZNF326Q5BKZ1 582 aaKnown RBP23.35■■□□□ 1.33
VGLL4-202ENST00000413604 TRPM2O94759 1503 aa23.34■■□□□ 1.33
VGLL4-202ENST00000413604 DIP2AQ14689 1571 aa23.32■■□□□ 1.32
VGLL4-202ENST00000413604 FAM135BQ49AJ0 1406 aa23.32■■□□□ 1.32
VGLL4-202ENST00000413604 MSH6P52701 1360 aa23.31■■□□□ 1.32
VGLL4-202ENST00000413604 SLC4A1APQ9BWU0 796 aaKnown RBP23.31■■□□□ 1.32
VGLL4-202ENST00000413604 NRXN3Q9Y4C0 1643 aa23.3■■□□□ 1.32
VGLL4-202ENST00000413604 PTPRUQ92729 1446 aa23.29■■□□□ 1.32
VGLL4-202ENST00000413604 ROBO1Q9Y6N7 1651 aa23.29■■□□□ 1.32
VGLL4-202ENST00000413604 KIF1BO60333 1816 aa23.28■■□□□ 1.32
VGLL4-202ENST00000413604 PIK3R4Q99570 1358 aa23.28■■□□□ 1.32
VGLL4-202ENST00000413604 AMOTL2Q9Y2J4 779 aa23.27■■□□□ 1.32
VGLL4-202ENST00000413604 NEXMIFQ5QGS0 1516 aa23.27■■□□□ 1.32
VGLL4-202ENST00000413604 FOXD1Q16676 465 aa23.27■■□□□ 1.32
VGLL4-202ENST00000413604 SLAIN2Q9P270 581 aa23.26■■□□□ 1.31
VGLL4-202ENST00000413604 SETBP1Q9Y6X0 1596 aa23.26■■□□□ 1.31
VGLL4-202ENST00000413604 SOCS7O14512 581 aa23.25■■□□□ 1.31
VGLL4-202ENST00000413604 C14orf37Q86TY3 774 aa23.25■■□□□ 1.31
VGLL4-202ENST00000413604 METP08581 1390 aa23.23■■□□□ 1.31
VGLL4-202ENST00000413604 NCOA3Q9Y6Q9 1424 aa23.21■■□□□ 1.31
VGLL4-202ENST00000413604 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.21■■□□□ 1.31
VGLL4-202ENST00000413604 XRN1Q8IZH2 1706 aaKnown RBP23.2■■□□□ 1.3
VGLL4-202ENST00000413604 PHF23Q9BUL5 403 aaPredicted RBP23.18■■□□□ 1.3
VGLL4-202ENST00000413604 C19orf44Q9H6X5 657 aa23.18■■□□□ 1.3
VGLL4-202ENST00000413604 ATF3P18847 181 aa23.15■■□□□ 1.3
VGLL4-202ENST00000413604 MPHOSPH9Q99550 1183 aa23.15■■□□□ 1.3
VGLL4-202ENST00000413604 CADPS2Q86UW7 1296 aa23.14■■□□□ 1.3
VGLL4-202ENST00000413604 PHLPP1O60346 1717 aa23.14■■□□□ 1.3
VGLL4-202ENST00000413604 VGFO15240 615 aaPredicted RBP23.13■■□□□ 1.29
VGLL4-202ENST00000413604 PPLO60437 1756 aa23.12■■□□□ 1.29
VGLL4-202ENST00000413604 RPGRIP1LQ68CZ1 1315 aa23.11■■□□□ 1.29
VGLL4-202ENST00000413604 SETD1AO15047 1707 aaKnown RBP23.11■■□□□ 1.29
VGLL4-202ENST00000413604 RGS17Q9UGC6 210 aaPredicted RBP23.1■■□□□ 1.29
VGLL4-202ENST00000413604 CCDC144AA2RUR9 1427 aa23.09■■□□□ 1.29
VGLL4-202ENST00000413604 SETD5Q9C0A6 1442 aa23.09■■□□□ 1.29
VGLL4-202ENST00000413604 RGL3Q3MIN7 710 aa23.08■■□□□ 1.29
VGLL4-202ENST00000413604 COL16A1Q07092 1604 aaPredicted RBP23.08■■□□□ 1.28
VGLL4-202ENST00000413604 BRINP3Q76B58 766 aa23.06■■□□□ 1.28
VGLL4-202ENST00000413604 DCCP43146 1447 aa23.05■■□□□ 1.28
VGLL4-202ENST00000413604 NALCNQ8IZF0 1738 aa23.05■■□□□ 1.28
VGLL4-202ENST00000413604 SPATA31E1Q6ZUB1 1445 aa23.05■■□□□ 1.28
VGLL4-202ENST00000413604 ADGRF5Q8IZF2 1346 aa23.04■■□□□ 1.28
VGLL4-202ENST00000413604 ADGRL3Q9HAR2 1447 aa23.04■■□□□ 1.28
VGLL4-202ENST00000413604 JCADQ9P266 1359 aa23.04■■□□□ 1.28
VGLL4-202ENST00000413604 MST1RQ04912 1400 aa23.03■■□□□ 1.28
VGLL4-202ENST00000413604 RAB3GAP2Q9H2M9 1393 aa23.03■■□□□ 1.28
VGLL4-202ENST00000413604 ROBO2Q9HCK4 1378 aa23.03■■□□□ 1.28
VGLL4-202ENST00000413604 AHDC1Q5TGY3 1603 aaPredicted RBP23.02■■□□□ 1.28
VGLL4-202ENST00000413604 PTCH1Q13635 1447 aa23■■□□□ 1.27
VGLL4-202ENST00000413604 IFT172Q9UG01 1749 aa22.99■■□□□ 1.27
VGLL4-202ENST00000413604 ASXL1Q8IXJ9 1541 aa22.99■■□□□ 1.27
VGLL4-202ENST00000413604 DDX17Q92841 729 aaKnown RBP22.97■■□□□ 1.27
VGLL4-202ENST00000413604 POTEAQ6S8J7 498 aa22.97■■□□□ 1.27
VGLL4-202ENST00000413604 ANKRD30BQ9BXX2 1392 aa22.95■■□□□ 1.27
VGLL4-202ENST00000413604 LRP6O75581 1613 aa22.95■■□□□ 1.26
VGLL4-202ENST00000413604 PRAG1Q86YV5 1406 aa22.95■■□□□ 1.26
VGLL4-202ENST00000413604 ACIN1Q9UKV3 1341 aaKnown RBP22.94■■□□□ 1.26
VGLL4-202ENST00000413604 NHSL1Q5SYE7 1610 aa22.94■■□□□ 1.26
VGLL4-202ENST00000413604 TMEM132EQ6IEE7 984 aa22.93■■□□□ 1.26
VGLL4-202ENST00000413604 STK26Q9P289 416 aa22.93■■□□□ 1.26
VGLL4-202ENST00000413604 C1orf167Q5SNV9 1468 aa22.92■■□□□ 1.26
VGLL4-202ENST00000413604 SHPRHQ149N8 1683 aa22.92■■□□□ 1.26
VGLL4-202ENST00000413604 PIK3C2GO75747 1445 aa22.91■■□□□ 1.26
VGLL4-202ENST00000413604 SPATA31A6Q5VVP1 1343 aa22.91■■□□□ 1.26
VGLL4-202ENST00000413604 ORAI2Q96SN7 254 aa22.89■■□□□ 1.26
VGLL4-202ENST00000413604 WAPLQ7Z5K2 1190 aa22.89■■□□□ 1.25
VGLL4-202ENST00000413604 NUTM2BA6NNL0 878 aaPredicted RBP22.88■■□□□ 1.25
VGLL4-202ENST00000413604 NUTM2EB1AL46 878 aaPredicted RBP22.88■■□□□ 1.25
VGLL4-202ENST00000413604 NUTM2AQ8IVF1 878 aaPredicted RBP22.88■■□□□ 1.25
VGLL4-202ENST00000413604 MEX3CQ5U5Q3 659 aaKnown RBP22.87■■□□□ 1.25
VGLL4-202ENST00000413604 LRPPRCP42704 1394 aaKnown RBP22.86■■□□□ 1.25
VGLL4-202ENST00000413604 TECPR2O15040 1411 aa22.85■■□□□ 1.25
VGLL4-202ENST00000413604 PLEKHH1Q9ULM0 1364 aa22.85■■□□□ 1.25
VGLL4-202ENST00000413604 LRRC59Q96AG4 307 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms